Hirundo rustica (Barn swallow): 120748806
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Entry
120748806 CDS
T09369
Name
(RefSeq) T-lymphocyte activation antigen CD80-like
KO
K05412
CD80 antigen
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03267
Virion - Adenovirus
hrt04514
Cell adhesion molecule (CAM) interaction
hrt04517
IgSF CAM signaling
hrt04620
Toll-like receptor signaling pathway
hrt04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
120748806
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120748806
04517 IgSF CAM signaling
120748806
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120748806
04672 Intestinal immune network for IgA production
120748806
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hrt04090
]
120748806
CD molecules [BR:
hrt04090
]
Proteins
120748806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
C2-set_2
ig
Ig_3
I-set
C2-set_3
Ig_VWDE
Ig_6
DUF1184
SPT_ssu-like
Motif
Other DBs
NCBI-GeneID:
120748806
NCBI-ProteinID:
XP_039911575
LinkDB
All DBs
Position
2:5233180..5255416
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AA seq
308 aa
AA seq
DB search
MMCLPASPPALALRTWLGLGLFVLLCLGTGQALEKKVVKSKVGEKVRLPCCHEIPRSEGL
REYRVYWQKNITDVVLAYSEGEMIRRHERYRNRTEMDPWNLTLWISPVEILDNGSYQCVV
QRNSVVVCGESVILFVTADFSKPNVTAEVSAESCELTEMVITCSSHGGFPRPRISGALNN
VSVEWNASWVSKSRFSPYNVTGKLVLNVTKDVNITCSVEYSGFAKSTSLLLKKTNDCVVP
PVPPPYNVITASIIIVITFILALTLAVRYLPRHVCSHCCKHQDSVEEDVKEYTKAPMSSK
GTGETASV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcctgcccgcttccccaccggccctggcgttgaggacgtggctggggctcggg
ctcttcgtgctgctctgcctcggcacaggccaagcgctggagaagaaagtagtcaaaagc
aaagtgggggaaaaggtcaggctgccttgttgtcatgaaatccccagatccgaaggccta
cgcgagtaccgtgtctactggcagaagaacattacggacgtggtgctggcctactcagag
ggcgaaatgatccgcaggcacgagcgctaccggaaccggacggagatggacccctggaac
ctcaccctgtggatctcccccgtggaaatcctggacaacggctcttaccagtgcgtggtt
cagcgcaactccgttgttgtgtgtggcgagtctgtcatcctctttgtgacagctgacttc
agcaagcccaatgtaacggcagaagtgtccgctgagtcttgcgagttgactgagatggtg
ataacgtgttcttctcacggaggtttccccaggcccagaatctctggagccctcaacaac
gtgtccgtggagtggaatgccagctgggtgtccaagtcccgcttcagcccttacaatgtc
actggaaaactggtgctcaacgtgaccaaagatgtcaacatcacttgctccgttgaatac
agtggctttgccaagtccaccagtttgcttctgaaaaaaacaaacgactgcgttgttcct
cctgtgcctccaccttataatgtcattactgcctcaattatcatcgttatcaccttcatt
ctggctctcaccctggcagtgagatacctcccaaggcatgtttgttctcactgttgtaag
caccaggattcggtggaagaggatgtgaaagaatatacaaaggcacctatgagctctaaa
gggaccggtgaaacagcatctgtatga
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integrated database retrieval system
