Hirundo rustica (Barn swallow): 120750541
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Entry
120750541 CDS
T09369
Name
(RefSeq) LOW QUALITY PROTEIN: macrophage mannose receptor 1-like
KO
K06560
mannose receptor, C type
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120750541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120750541
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hrt04054
]
120750541
04090 CD molecules [BR:
hrt04090
]
120750541
04091 Lectins [BR:
hrt04091
]
120750541
Membrane trafficking [BR:
hrt04131
]
Endocytosis
Phagocytosis
C-lectin receptors
120750541
Pattern recognition receptors [BR:
hrt04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
120750541
CD molecules [BR:
hrt04090
]
Proteins
120750541
Lectins [BR:
hrt04091
]
C-Type lectins
Others
120750541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
Xlink
UL45
Chordopox_A33R
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
120750541
NCBI-ProteinID:
XP_039915304
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All DBs
Position
1:136143714..136178499
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AA seq
1321 aa
AA seq
DB search
MQVTFAMSFFRFLVFLSLMQCALLSSVTFTLRGNANGQPCVFPFKYKDKHYNECTDAGRT
DGLLWCSTTADFDADELYGFCPQINDTERFWTEDVSTGIHYQINSESALTWHQARKSCQQ
QNAELLSITETQEQAYIGELTKEFDFAFWIGLNALDFNSGWQWAGGRPFRYLNWAPGSPS
LLPGKICGLLNPKKNAKWENQACNQRLGYICKKGSFSSKPDIMPKEELRPVQCTDGWWPY
AGHCYSIHRDPKAWKDALSSCKNQDGDLASIHNIAEYSFLVSQLGYKPTEELWLGLNDLK
AHFYFEWSDGTPVTFTKWQRRHPIYTNGLEDCVAVTGQDGYWATEVCNKQLGYICKKKPT
SQSSEKEAIEDPGCQKGWKRYGFHCFLVGSALLTFSEANKTCEKSKAYLATVESRNEXNF
LISLTGLRSEKYFWIGLSDTEEQGSFRWTNGETPHFTHWNTAMPGKEQGCVVMGSGISAG
LWDVVSCEKTSNYLCKQQAAGVPPPAPPEQGPGATCAEGWDRAARADACLKFFVREGNQK
KSWFEAEEFCREIGGNLVTINTREDQVLLWQLASDKGLNTQGFWIGLFLLNPDEGFSWID
GSPVIYENWEENEPNNYQELEHCVMFNRSPQMRWNDLRCEHLLNWICETKKGTLIKPEAN
YKLDYQLTNDGWIIYENKQYYFSKERVHMEEARRICQKNFADLVVIEKESKRRFLWQYIY
TKHRGSSYFIGLVVSFDQRFRWLDDTPVNYVAWAPNEPNFANNDENCVIMSEDFGFWKDI
NCAVKNAFICERHNSTYSGFAPTVLPPLGGCPESWLLFNNKCYKIFGSREEDKLTWHSAR
SVCRELGGNLASIHNNQVQAFLTFHLKDVASESWIGLNDINSEGTYLWTDGSVFDYSRWA
RGFPFRDKYTVVDRKYITIQTDCIIMTKRSVDEAGLWENTDCELKKSYICQMDSEPELFH
PTSAPDSDFVHYGNSSYLIIPSKMNWEEARKACKEKSSELASIFDYYSNIFLQLQAVQYG
ESLWIGLKSNVNYGYYRWTNKRKVSFSHWDYREPKLKIACVYLALSGAWKTALCNEKHLP
VCKKSEDVVPSDPPQDIGKCPESDHISWIPFRSHCYNFNANEMTWAQSVTQCIQSGGVLT
SVEDLDESNFLIEHADLYASKTSSFWIGIYRNVNGQLLWQDNSALDFVNWGDGQPSVDEL
AFCVELSAATGYWSVRPCSSQAGFICKKPKTILEAAGNVEDAKKDKASDHLNMWILLPLV
LIILLGVGFVIYFMFKIKTGSGTGRGVRRGSRQLPYSRALTAGDNGSDATINKEKNEHSV
V
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttacatttgcaatgagtttcttcaggtttctagttttcctttccctcatgcaa
tgtgcactactgtcatcagttacttttacattacgaggaaatgccaatggacagccttgt
gtattccctttcaagtacaaagacaagcactacaatgagtgcacagatgctggcaggaca
gatgggctgctctggtgttcaacaactgcagattttgatgctgatgaactgtatggattt
tgcccacaaataaatgacacagaaagattttggacagaagacgtttcaactggcattcac
tatcagataaactcagaatcagctctaacatggcatcaagcaaggaaaagctgtcagcag
caaaatgcagaactactaagcattacagagactcaggagcaagcatatataggagagcta
actaaagaatttgattttgccttctggattggtttgaatgctttggatttcaacagtgga
tggcaatgggctgggggcaggcctttcagatatttaaactgggccccaggaagtccttcc
ctgctccctgggaaaatctgtggactgctgaatcccaaaaagaatgctaaatgggaaaac
caagcctgcaaccagagactaggctacatttgtaaaaagggatccttcagttcaaagcct
gacattatgcccaaagaggaattgaggcctgttcagtgcacagatggctggtggccatat
gcaggtcactgctacagcattcaccgggaccccaaagcatggaaagatgctctgtcttca
tgtaaaaatcaagatggagatttggcaagcatccacaacattgctgaatacagctttcta
gtgtcacagcttggttacaagccaacagaagagctgtggctgggtctgaacgacctgaag
gctcacttctacttcgagtggagtgacgggactcctgtgacgttcaccaaatggcagcgc
aggcatcccatctacaccaacggcctggaggactgcgtcgctgtgacgggacaggacgga
tactgggcaactgaagtttgtaataagcaacttggttacatctgtaaaaagaagcctaca
tcacaatcctctgaaaaagaggcaattgaggacccaggctgccagaaaggttggaaaaga
tatggttttcactgtttcttggtgggttcggcccttttgacattctcagaagcaaataag
acatgtgaaaagagcaaagcttatctagctacggtggaaagcagaaatgagtaaaacttt
ctgattagtctgacggggctgaggtctgaaaaatatttctggattggcctctctgacaca
gaggaacaagggagtttcaggtggaccaatggagaaactcctcatttcacacactggaac
acagcaatgccagggaaagagcaaggctgtgttgtcatgggatctggaatttcagctgga
ttatgggatgttgttagctgtgagaagacatcaaattatctctgcaaacagcaggcagcg
ggagtgccacctcctgctcctccagaacagggccctggggccacatgtgctgaaggctgg
gacagagccgctcgggcagacgcatgcctcaaattttttgtgagagagggaaatcaaaag
aagtcttggtttgaagctgaagaattctgtagagaaataggtggcaatctggttacaatt
aatacaagagaagatcaagttttattatggcaattagcttcggataaaggactgaacact
cagggtttctggattggtttgtttctcttaaatcctgatgaaggattttcctggattgat
ggttcccctgtaatttatgagaactgggaggaaaatgaacccaacaactatcaagaactt
gaacactgtgttatgtttaatagatcaccccaaatgcgttggaatgacttgcgctgtgaa
catttacttaattggatttgtgaaacaaaaaaaggtacattgataaagcccgaagcaaac
tacaaacttgactatcaactcaccaatgatggatggattatatatgaaaataagcagtac
tatttcagcaaagaacgtgtccatatggaagaagcacggagaatttgtcagaaaaacttc
gcagatcttgttgtcattgagaaagaaagcaaaagacgatttctgtggcaatacatttac
acaaaacacagaggaagctcatacttcattggcttagttgtcagctttgatcagagattc
agatggctggatgacaccccagtgaattatgttgcttgggctccaaatgaacctaatttt
gcaaataatgatgaaaactgtgtgataatgtcagaagattttggcttttggaaagacata
aattgtgctgtgaaaaatgcctttatctgtgaaaggcacaattcaacttactcaggattt
gctcctactgtacttccacctctgggagggtgtcctgaaagttggcttttgtttaacaat
aagtgttataaaatatttggatcccgagaagaagacaaactaacttggcactcagcaaga
agtgtttgtagagaattagggggaaatttggcctctatacacaataatcaagtgcaagct
tttctcaccttccacctaaaggatgttgccagcgagtcatggattgggctgaatgatatt
aacagtgagggtacatatctttggacagacggaagtgtttttgactactcaaggtgggcc
cgaggattcccattcagagataaatacacagtggttgaccggaagtatattacaatacag
actgattgtattataatgacaaaaagatccgtagatgaggcaggattatgggaaaatact
gattgtgagcttaaaaaaagctatatttgccagatggacagcgagcctgaactgtttcac
cccacaagtgctccagattccgattttgtccattatggtaacagcagctatttaatcatt
ccttctaaaatgaattgggaagaagcaagaaaagcatgcaaggagaaatcttcagagctt
gccagcatttttgattattacagtaatatattcttgcagctgcaggcagtgcagtacgga
gagtccttatggattgggctcaaaagcaatgtgaattatggatattatagatggaccaat
aaaaggaaagtaagtttttctcattgggactacagagaaccaaaactgaaaatagcctgt
gtctatctagcactctctggggcctggaaaacagcactttgtaatgagaaacatcttcct
gtctgcaaaaaatctgaggatgtagttccttccgatcccccccaggatattggaaaatgt
cctgaatctgatcacatatcttggattcctttcagaagccactgctataacttcaatgcc
aatgaaatgacctgggctcaatctgtgactcagtgcattcaatcaggtggtgtgttgact
tctgtagaagatctggatgaatcaaactttttaatagaacatgcagatttatatgcaagt
aagacaagcagcttttggataggaatatacagaaatgtaaatgggcagctgctttggcaa
gacaacagtgccttagactttgtcaactggggtgacgggcagccctcggtggacgagctg
gctttctgcgtggagctgtctgcagccactggctactggagtgtccgcccttgctcttcc
caagcaggctttatttgtaagaaaccaaagactattcttgaagcagctggaaatgtggaa
gatgccaaaaaggacaaagccagtgatcacctgaatatgtggatactacttcctctggtc
ctcataattttattgggggtgggcttcgtgatttatttcatgttcaagatcaaaactgga
agtggaactggaagaggagtgaggcggggcagcaggcagctgccatacagccgtgccctg
actgcaggggacaatggaagtgatgctaccatcaacaaagaaaaaaatgaacacagtgtt
gtctga
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