KEGG   Hirundo rustica (Barn swallow): 120751110
Entry
120751110         CDS       T09369                                 
Symbol
SF3B6
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
hrt  Hirundo rustica (Barn swallow)
Pathway
hrt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120751110 (SF3B6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hrt03041]
    120751110 (SF3B6)
Spliceosome [BR:hrt03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120751110 (SF3B6)
 Complex B
    120751110 (SF3B6)
 Complex C
   U2 SnRNP specific factors
    120751110 (SF3B6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 120751110
NCBI-ProteinID: XP_039916457
LinkDB
Position
3:complement(110165206..110169275)
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcgatgcaagcagccaaacgagccaatatccggctcccgccggaggtcaaccggatc
ctgtacatcaggaacctgccgtacaaaatcacggccgaggagatgtacgacatttttggg
aagtacgggcccatccggcagatcagagttggaaatacccctgagaccagaggaacagcc
tacgtggtctatgaggacatcttcgatgccaagaacgcctgtgaccacctgtcggggttc
aacgtgtgtaacagatacctcgtggttctgtactacaacgcaaacagggcattccaaaag
atggacacaaagaagaaagaagaacagcttaaacttctcaaggaaaaatatggaattaac
acagacccaccaaaataa

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