Hirundo rustica (Barn swallow): 120752594
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Entry
120752594 CDS
T09369
Symbol
SMYD1
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt00310
Lysine degradation
hrt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120752594 (SMYD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120752594 (SMYD1)
Enzymes [BR:
hrt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
120752594 (SMYD1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
120752594 (SMYD1)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120752594 (SMYD1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-MYND
SET
TPR_12
FRG1
Motif
Other DBs
NCBI-GeneID:
120752594
NCBI-ProteinID:
XP_039919828
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Position
5:complement(4957510..4982553)
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AA seq
491 aa
AA seq
DB search
MTKGGMESVEVFTTEGKGRGLKAQKEFLPGDVIFAEPAYAAVVFDSLTHVICHTCFKRQE
RLHRCGQCKFAYYCDRTCQRAAWLNHKNECSAIKRHGKAPTENIRLAARILWKMEREGSG
LSEGCLVSIDELQNHVESFGEDEKRELRADVESFLEFWPPHCQQFGMQLISHVFGVISCN
GFTLSDQRGLQAVGVGIFPNLCQANHDCWPNCTVVFNNGNHEAVRSMFHTQMRIELRALT
RISPGDELTVSYVDFLSLSEERRKQLKKQYYFDCTCEHCKKQLKDDLMLAVKAGESKPSA
DTVKEVIQLSKDTLEKINKARMEGHYHEVVKLCRDCLKKQEPVLGDTNIYLLRILSIASE
VLSYLQMFEEAADYAKRMVDGYLKIYHPNNAQLGMAVMRAGVTHWHAGLIEAGHGLICKA
YAILLITHGPSHPITKDLEVMRVQTEMELRMFQQNEFMYYKMREAALKNQKIQVMPEPSN
ENTPSLFHKKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaggaggaatggagtcggtggaagtgttcacaactgaaggcaaaggcaggggt
ttgaaagcccagaaggagttcttgcctggggatgtcatcttcgccgagccagcctacgca
gccgtggttttcgacagcctgacacacgtcatctgtcacacctgcttcaagcggcaggag
aggctgcaccgctgcgggcagtgcaagttcgcctactactgcgacaggacctgccagaga
gcagcctggctcaaccacaaaaatgagtgctctgccatcaagaggcacggcaaggcaccc
acggaaaacatcaggctggctgcccgcatcctctggaagatggagcgggagggcagcggg
ctgtccgagggctgcctggtgtccatcgacgagctgcagaaccacgtggagagcttcgga
gaggacgagaagagggagctgcgagctgacgtggagagtttcctggagttctggccgccc
cactgccagcagttcgggatgcagctcatctcccacgttttcggagtgatcagctgcaat
ggctttaccctcagtgaccaaagaggactgcaggctgttggtgtgggaatcttccccaac
ctctgccaggccaaccacgactgctggcccaactgcactgtcgtcttcaacaatggcaat
catgaggctgtaagatcaatgttccacacacagatgaggatcgagctgcgggccctgacc
aggatttctccgggggatgagctgacggtttcctacgtggatttcctcagcctgagcgag
gagcggcggaagcagctgaagaagcagtattacttcgactgcacgtgcgagcactgcaag
aaacagctcaaggatgacctgatgctggcagtgaaggcaggggagagcaagccctctgca
gacacggtgaaggaggtgatccagctctccaaggacacgctggagaagatcaacaaggcc
cgcatggagggtcattaccacgaggttgtgaagctgtgccgtgactgcctgaagaaacag
gagcctgtgctgggggacacaaacatctacctgctgaggatcctcagcattgcctccgag
gtgctctcctacctccagatgtttgaggaagcagctgactacgccaagaggatggtggat
ggctacctgaagatttaccatcccaacaacgcgcagctgggcatggccgtgatgcgggca
ggagtgactcactggcacgctggcctcattgaagctggccatggcttgatctgcaaagcc
tacgccattcttctgataactcatggaccttcccaccccattaccaaagacctggaggtc
atgcgtgtgcagacggagatggagctgcgcatgttccagcagaacgagttcatgtattac
aagatgagggaagctgccctcaagaaccagaagatccaagtcatgcctgaacccagcaat
gagaacacgccaagcctcttccacaaaaaggaatga
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