Hirundo rustica (Barn swallow): 120758270
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Entry
120758270 CDS
T09369
Symbol
SLC6A11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120758270 (SLC6A11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrt02000
]
120758270 (SLC6A11)
Transporters [BR:
hrt02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120758270 (SLC6A11)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
120758270
NCBI-ProteinID:
XP_039932304
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Position
12:7527976..7615760
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AA seq
620 aa
AA seq
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MTAEKTIPIINGKPEDALDPEASSTNLVHSNDKKVHERGHWNNKVEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGI
GYATQVIEAHLNVYYIIILAWAIFYLFNCFTTELPWASCGHEWNTENCVEFQKLNMSNCS
QVSLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWKGTKSTGK
VVYVTATFPYIMLMILLIRGVTLPGASEGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAI
CLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAE
SGPGLAFIAYPKAVTMMPLSPLWAALFFMMLIFLGLDSQFVCVESIVTAVVDMYPKVFRR
GYRRELLILGLSVVSYFLGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFECVCIGWVYG
SNRFYENIEDMIGYKPVSLIKWCWMVLTPGICAGIFIFFLVKYKPLKYNNVYIYPDWGYG
IGWMMALSSMVCIPLWICIKLWKTEGTFMEKFRKLITPSSDLKMRGKLGGGAYIAAINDC
DAKLKGDGTISTITEKETHF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaaaagactattcctataattaacggcaagccagaggatgctttggaccca
gaagcctcaagtaccaatctcgtccacagcaacgataagaaagttcatgaaagaggtcac
tggaacaataaggttgaatttgtgctttctgtggcaggggagattatcgggttgggaaac
gtctggagattcccatatctttgctacaagaatggaggaggtgctttcctcatcccttac
gtggtcttttttatttgctgtggaataccagtatttttcttggagacggccttgggacag
tttacaagtgaaggaggcatcacatgctggaggaaagtctgccctctctttgaaggcatt
ggctatgctacccaagttatagaggcacacctaaatgtatattacatcatcattttagca
tgggctatcttctatttgttcaactgctttactacagagcttccctgggcttcctgtggc
cacgaatggaatacagaaaactgtgtggaatttcaaaaacttaacatgagcaactgcagt
caagtctctttacaaaatgccacttctccagtgatggaattctgggaacgaagggtgctg
gcaatttccgatgggattgagcacattgggaatctgcgctgggagctcgccctgtgcctc
ctggcggcttggactatttgctatttctgcatctggaaagggaccaaatccaccggaaag
gtcgtgtatgtgacagccacgttcccctacatcatgctgatgatcctcctgattcggggg
gtgacgttacctggcgcttctgaggggatcaaattctacctttaccccgacatctcccgg
ctctctgacccacaggtgtgggtggatgctggcacccagatcttcttctcctatgccatc
tgcttggggtgcctgacagccctggggagttacaacaactacaacaacaactgctacaga
gactgcatcatgctctgctgcttgaacagtggcacaagctttgttgctggttttgctatc
ttttcagttcttggatttatggcttatgaacaaggcgtgcccattgcagaagttgcagaa
tcaggaccaggacttgcattcattgcttaccctaaagctgtcaccatgatgcctctgtct
cctttgtgggcagctctgttcttcatgatgctcatcttcctgggcttggacagccagttt
gtgtgtgtggaaagcatcgtgacagccgtggtggacatgtaccccaaggtgttccgcagg
ggctacaggagggagctgctcatccttggcctctctgtcgtgtcctacttcctgggcctc
atcatgctaactgagggtgggatgtatgtctttcagctctttgactcctatgcagccagt
gggatgtgcctgctctttgttgccatattcgagtgtgtctgcataggctgggtgtacggc
agcaatcgcttttatgagaacattgaagacatgattgggtacaagcctgtgtcgttgatt
aagtggtgctggatggtcctgacgccaggtatttgtgcaggaatcttcatctttttcctg
gtgaaatacaagcccctgaaatacaacaacgtgtacatctaccctgactggggctatggc
atcgggtggatgatggctctctcctccatggtctgcatcccactgtggatctgcatcaag
ctctggaagactgaaggcaccttcatggagaaattcaggaagttgattacacctagctca
gacctgaaaatgcggggcaagctcggaggaggagcctacattgcagcaataaatgactgt
gatgccaaactgaaaggagatggcaccatttccaccatcacagaaaaggagacacatttc
tga
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