Hirundo rustica (Barn swallow): 120760245
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Entry
120760245 CDS
T09369
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120760245 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120760245 (SS18L1)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120760245 (SS18L1)
GBAF(ncBAF) complex
120760245 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
120760245
NCBI-ProteinID:
XP_039936213
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All DBs
Position
16:4739131..4753186
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AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNINLGPGGMSQSASNQSLHSQSNLSDAIGTGLPPSSLMQ
SQISNGPNHVSMQQSGQSTMPTTSLSMTVSSHGTGPGYSHTVPASQNVPMQGQGSIGNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMMSQSNQGNSMMGQRPMGP
YRASQQGSSQQYMGQEEYYSEQYSHGQGSSEPMNQQYYPDGHGDYAYQQSSYTEQSYDRS
FDDSTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPNQQSYPGQQQGYGPAQGASSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcctttgcttctgctcgcccgagaggcaaaggggaggtcacccagcaaact
atccagaagatgctagatgaaaatcaccacctaatacaatgtattatggattatcagagc
aaggggaaaactgcagaatgtactcaataccaacaaatcttgcacagaaacctggtttac
ttggcaacaatagcagactctaaccagaatatgcagtccttgcttcctgctccaccaacg
caaaatatcaacttgggcccgggagggatgagtcagagcgcatccaaccaatctctccac
tcccagagcaatctcagcgatgccatcgggaccggccttcctccttcctccctcatgcag
agtcagattagcaatggtcctaaccacgtgtctatgcagcagtcaggccagagcaccatg
cccacgacctctctgagcatgactgtcagcagccacgggactggccctggttacagccac
acggtgcctgcgtctcagaacgtgcccatgcaaggccaggggtcaataggcaattatgtc
tctcgaacaaacatcaacatgcagtctaacccagtctccatgatgcaccagcaagcagca
acgtcacattacaactctgcacaaggagggagccagcactaccagggacaatcctccatt
gccatgatgagccagagcaaccaaggcaacagcatgatggggcagcgacccatgggccct
tacagagcttcacagcaaggttcctcacagcagtacatgggtcaggaggaatattacagt
gagcagtacagtcatggccaaggctcatcagaacctatgaatcagcaatactatccagat
ggacatggtgattatgcctatcagcagtcatcctacactgaacagagctacgaccggtcg
tttgatgactctacacaacactactatgaaggaggaaattctcagtacagccagcagcag
gcagggtatcaacagggagctgcacaacagcaaacatattcccagcagcagtacccaaat
caacagagttacccaggacaacagcaaggctatggtcctgcacaaggagcctcttcacag
tattccagctaccaacagggacaggggcagcaatatggaagttacagagcttcccagaca
ggcccatccgctcagcaacagaggccttatggctatgagcagggacaatatggaaattac
cagcaataa
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