Halovivax ruber: Halru_2545
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Entry
Halru_2545 CDS
T02402
Name
(GenBank) DNA-directed RNA polymerase, subunit E'
KO
K15171
transcription elongation factor SPT4
Organism
hru
Halovivax ruber
Pathway
hru03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Halru_2545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hru03021
]
Halru_2545
03019 Messenger RNA biogenesis [BR:
hru03019
]
Halru_2545
Transcription machinery [BR:
hru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Halru_2545
RNA polymerase I system
Halru_2545
Messenger RNA biogenesis [BR:
hru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Halru_2545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
DZR
zinc_ribbon_2
zf-RanBP
Motif
Other DBs
NCBI-ProteinID:
AGB17126
UniProt:
L0IFW9
LinkDB
All DBs
Position
complement(2569690..2569887)
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AA seq
65 aa
AA seq
DB search
MASNRLVCRECHLVNEADAETCASCASSSLTEDWAGYVVIAHPEESEIATEMQVDEPGAY
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaaccgactcgtctgtcgcgagtgccacctcgtcaacgaggccgacgcggag
acctgcgcgtcctgtgcgtcctcttccctcaccgaagactgggcgggctacgtcgtcatc
gcccacccggaagagtccgagatcgcgacggagatgcaggtcgacgaacccggcgcgtac
gcgctcaaggtccggtga
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