KEGG   Halovivax ruber: Halru_2545
Entry
Halru_2545        CDS       T02402                                 
Name
(GenBank) DNA-directed RNA polymerase, subunit E'
  KO
K15171  transcription elongation factor SPT4
Organism
hru  Halovivax ruber
Pathway
hru03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hru00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    Halru_2545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hru03021]
    Halru_2545
   03019 Messenger RNA biogenesis [BR:hru03019]
    Halru_2545
Transcription machinery [BR:hru03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     Halru_2545
  RNA polymerase I system
     Halru_2545
Messenger RNA biogenesis [BR:hru03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     Halru_2545
SSDB
Motif
Pfam: Spt4 DZR zinc_ribbon_2 zf-RanBP
Other DBs
NCBI-ProteinID: AGB17126
UniProt: L0IFW9
LinkDB
Position
complement(2569690..2569887)
AA seq 65 aa
MASNRLVCRECHLVNEADAETCASCASSSLTEDWAGYVVIAHPEESEIATEMQVDEPGAY
ALKVR
NT seq 198 nt   +upstreamnt  +downstreamnt
atggcgtcgaaccgactcgtctgtcgcgagtgccacctcgtcaacgaggccgacgcggag
acctgcgcgtcctgtgcgtcctcttccctcaccgaagactgggcgggctacgtcgtcatc
gcccacccggaagagtccgagatcgcgacggagatgcaggtcgacgaacccggcgcgtac
gcgctcaaggtccggtga

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