KEGG   Homo sapiens (human): 10332
Entry
10332             CDS       T01001                                 
Symbol
CLEC4M, CD209L, CD299, DC-SIGN2, DC-SIGNR, DCSIGNR, HP10347, L-SIGN, LSIGN
Name
(RefSeq) C-type lectin domain family 4 member M
  KO
K06563  C-type lectin domain family 4 member L/M
Organism
hsa  Homo sapiens (human)
Pathway
hsa03260  Virion - Human immunodeficiency virus
hsa03264  Virion - Flavivirus and Alphavirus
hsa03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
hsa03273  Virion - Lassa virus and SFTS virus
hsa04145  Phagosome
hsa04517  IgSF CAM signaling
hsa04625  C-type lectin receptor signaling pathway
hsa05152  Tuberculosis
hsa05162  Measles
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03260 Virion - Human immunodeficiency virus
    10332 (CLEC4M)
   03264 Virion - Flavivirus and Alphavirus
    10332 (CLEC4M)
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    10332 (CLEC4M)
   03273 Virion - Lassa virus and SFTS virus
    10332 (CLEC4M)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    10332 (CLEC4M)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    10332 (CLEC4M)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    10332 (CLEC4M)
 09160 Human Diseases
  09172 Infectious disease: viral
   05162 Measles
    10332 (CLEC4M)
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    10332 (CLEC4M)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    10332 (CLEC4M)
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:hsa04054]
    10332 (CLEC4M)
   04515 Cell adhesion molecules [BR:hsa04515]
    10332 (CLEC4M)
   04090 CD molecules [BR:hsa04090]
    10332 (CLEC4M)
   04091 Lectins [BR:hsa04091]
    10332 (CLEC4M)
Membrane trafficking [BR:hsa04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    10332 (CLEC4M)
Pattern recognition receptors [BR:hsa04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   10332 (CLEC4M)
Cell adhesion molecules [BR:hsa04515]
 Lectins
  Selectins and C-type lectins
   10332 (CLEC4M)
CD molecules [BR:hsa04090]
 Proteins
  10332 (CLEC4M)
Lectins [BR:hsa04091]
 C-Type lectins
  Asialoglycoprotein and DC receptors
   10332 (CLEC4M)
SSDB
Motif
Pfam: Lectin_C DUF2170 DUF2730 Occludin_ELL CT398_CC DIMCO_N Vps5 Tup_N GIT1_C Com_YlbF DGCR6 V-SNARE UL45 DUF1826
Other DBs
NCBI-GeneID: 10332
NCBI-ProteinID: NP_055072
OMIM: 605872
HGNC: 13523
Ensembl: ENSG00000104938
UniProt: Q9H2X3
Structure
LinkDB
Position
19:7763243..7769605
AA seq 399 aa
MSDSKEPRVQQLGLLEEDPTTSGIRLFPRDFQFQQIHGHKSSTGCLGHGALVLQLLSFML
LAGVLVAILVQVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLK
AAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQE
IYQELTRLKAAVGELPEKSKLQEIYQELTELKAAVGELPEKSKLQEIYQELTQLKAAVGE
LPDQSKQQQIYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVR
AQLVVIKTAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEP
NNSGNEDCAEFSGSGWNDNRCDVDNYWICKKPAACFRDE
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgagtgactccaaggaaccaagggtgcagcagctgggcctcctggaagaagatccaaca
accagtggcatcagactttttccaagagactttcaattccagcagatacatggccacaag
agctctacagggtgtcttggccatggcgccctggtgctgcaactcctctccttcatgctc
ttggctggggtcctggtggccatccttgtccaagtgtccaaggtccccagctccctaagt
caggaacaatccgagcaagacgcaatctaccagaacctgacccagcttaaagctgcagtg
ggtgagctctcagagaaatccaagctgcaggagatctaccaggagctgacccagctgaag
gctgcagtgggtgagttgccagagaaatccaagctgcaggagatctaccaggagctgacc
cggctgaaggctgcagtgggtgagttgccagagaaatccaagctgcaggagatctaccag
gagctgacccggctgaaggctgcagtgggtgagttgccagagaaatccaagctgcaggag
atctaccaggagctgacccggctgaaggctgcagtgggtgagttgccagagaaatccaag
ctgcaggagatctaccaggagctgacggagctgaaggctgcagtgggtgagttgccagag
aaatccaagctgcaggagatctaccaggagctgacccagctgaaggctgcagtgggtgag
ttgccagaccagtccaagcagcagcaaatctatcaagaactgaccgatttgaagactgca
tttgaacgcctgtgccgccactgtcccaaggactggacattcttccaaggaaactgttac
ttcatgtctaactcccagcggaactggcacgactccgtcaccgcctgccaggaagtgagg
gcccagctcgtcgtaatcaaaactgctgaggagcagaacttcctacagctgcagacttcc
aggagtaaccgcttctcctggatgggactttcagacctaaatcaggaaggcacgtggcaa
tgggtggacggctcacctctgtcacccagcttccagcggtactggaacagtggagaaccc
aacaatagcgggaatgaagactgtgcggaatttagtggcagtggctggaacgacaatcga
tgtgacgttgacaattactggatctgcaaaaagcccgcagcctgcttcagagacgaatag

KEGG   Homo sapiens (human): 30835
Entry
30835             CDS       T01001                                 
Symbol
CD209, CDSIGN, CLEC4L, DC-SIGN, DC-SIGN1, hDC-SIGN
Name
(RefSeq) CD209 molecule
  KO
K06563  C-type lectin domain family 4 member L/M
Organism
hsa  Homo sapiens (human)
Pathway
hsa03260  Virion - Human immunodeficiency virus
hsa03264  Virion - Flavivirus and Alphavirus
hsa03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
hsa03273  Virion - Lassa virus and SFTS virus
hsa04145  Phagosome
hsa04517  IgSF CAM signaling
hsa04625  C-type lectin receptor signaling pathway
hsa05152  Tuberculosis
hsa05162  Measles
Network
nt06546  IgSF CAM signaling
  Element
N01965  ICAM2 interactions
N01966  ICAM3 interactions
Disease
H00342  Tuberculosis
H01563  HIV infection
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03260 Virion - Human immunodeficiency virus
    30835 (CD209)
   03264 Virion - Flavivirus and Alphavirus
    30835 (CD209)
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    30835 (CD209)
   03273 Virion - Lassa virus and SFTS virus
    30835 (CD209)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    30835 (CD209)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    30835 (CD209)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    30835 (CD209)
 09160 Human Diseases
  09172 Infectious disease: viral
   05162 Measles
    30835 (CD209)
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    30835 (CD209)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    30835 (CD209)
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:hsa04054]
    30835 (CD209)
   04515 Cell adhesion molecules [BR:hsa04515]
    30835 (CD209)
   04090 CD molecules [BR:hsa04090]
    30835 (CD209)
   04091 Lectins [BR:hsa04091]
    30835 (CD209)
Membrane trafficking [BR:hsa04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    30835 (CD209)
Pattern recognition receptors [BR:hsa04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   30835 (CD209)
Cell adhesion molecules [BR:hsa04515]
 Lectins
  Selectins and C-type lectins
   30835 (CD209)
CD molecules [BR:hsa04090]
 Proteins
  30835 (CD209)
Lectins [BR:hsa04091]
 C-Type lectins
  Asialoglycoprotein and DC receptors
   30835 (CD209)
SSDB
Motif
Pfam: Lectin_C DUF2170 Occludin_ELL DUF2730 Baculo_PEP_C PaaA-like_N DGCR6 Vps5
Other DBs
NCBI-GeneID: 30835
NCBI-ProteinID: NP_066978
OMIM: 604672
HGNC: 1641
Ensembl: ENSG00000090659
UniProt: Q9NNX6 B2R907
Structure
LinkDB
Position
19:complement(7739993..7747534)
AA seq 404 aa
MSDSKEPRLQQLGLLEEEQLRGLGFRQTRGYKSLAGCLGHGPLVLQLLSFTLLAGLLVQV
SKVPSSISQEQSRQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKL
QEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAAVGELPEKSKMQEIYQELTRLKAAV
GELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQ
ELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQ
NFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFS
GNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPATPNPPPA
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgagtgactccaaggaaccaagactgcagcagctgggcctcctggaggaggaacagctg
agaggccttggattccgacagactcgaggatacaagagcttagcagggtgtcttggccat
ggtcccctggtgctgcaactcctctccttcacgctcttggctgggctccttgtccaagtg
tccaaggtccccagctccataagtcaggaacaatccaggcaagacgcgatctaccagaac
ctgacccagcttaaagctgcagtgggtgagctctcagagaaatccaagctgcaggagatc
taccaggagctgacccagctgaaggctgcagtgggtgagcttccagagaaatctaagctg
caggagatctaccaggagctgacccggctgaaggctgcagtgggtgagcttccagagaaa
tctaagctgcaggagatctaccaggagctgacctggctgaaggctgcagtgggtgagctt
ccagagaaatctaagatgcaggagatctaccaggagctgactcggctgaaggctgcagtg
ggtgagcttccagagaaatctaagcagcaggagatctaccaggagctgacccggctgaag
gctgcagtgggtgagcttccagagaaatctaagcagcaggagatctaccaggagctgacc
cggctgaaggctgcagtgggtgagcttccagagaaatctaagcagcaggagatctaccag
gagctgacccagctgaaggctgcagtggaacgcctgtgccacccctgtccctgggaatgg
acattcttccaaggaaactgttacttcatgtctaactcccagcggaactggcacgactcc
atcaccgcctgcaaagaagtgggggcccagctcgtcgtaatcaaaagtgctgaggagcag
aacttcctacagctgcagtcttccagaagtaaccgcttcacctggatgggactttcagat
ctaaatcaggaaggcacgtggcaatgggtggacggctcacctctgttgcccagcttcaag
cagtattggaacagaggagagcccaacaacgttggggaggaagactgcgcggaatttagt
ggcaatggctggaacgacgacaaatgtaatcttgccaaattctggatctgcaaaaagtcc
gcagcctcctgctccagggatgaagaacagtttctttctccagcccctgccaccccaaac
ccccctcctgcgtag

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