KEGG   Homo sapiens (human): 1465
Entry
1465              CDS       T01001                                 
Symbol
CSRP1, CRP, CRP1, CSRP, CYRP, D1S181E, HEL-141, HEL-S-286
Name
(RefSeq) cysteine and glycine rich protein 1
  KO
K09377  cysteine and glycine-rich protein
Organism
hsa  Homo sapiens (human)
Pathway
hsa04820  Cytoskeleton in muscle cells
Network
nt06539  Cytoskeleton in muscle cells
  Element
N01820  Sarcomere, Z-disc
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    1465 (CSRP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    1465 (CSRP1)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain LIM
    1465 (CSRP1)
SSDB
Motif
Pfam: LIM zf-C3HC4_IRF-2BP1_2 DUF6237 TNFR_c6 Zn_ribbon_ACC
Other DBs
NCBI-GeneID: 1465
NCBI-ProteinID: NP_001180500
OMIM: 123876
HGNC: 2469
Ensembl: ENSG00000159176
UniProt: P21291 A0A384P5K2
LinkDB
Position
1:complement(201483530..201507123)
AA seq 193 aa
MPNWGGGKKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKS
CYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHEEAPGHRPTTNPNASKFAQKIGGSERCP
RCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLADKDGEIYCKGCYAKNFGPKGF
GFGQGAGALVHSE
NT seq 582 nt   +upstreamnt  +downstreamnt
atgccgaactggggaggaggcaagaaatgtggggtgtgtcagaagacggtttactttgcc
gaagaggttcagtgcgaaggcaacagcttccataaatcctgcttcctgtgcatggtctgc
aagaagaatctggacagtaccactgtggccgtgcatggtgaggagatttactgcaagtcc
tgctacggcaagaagtatgggcccaaaggctatggctacgggcagggcgcaggcaccctc
agcactgacaagggggagtcgctgggtatcaagcacgaggaagcccctggccacaggccc
accaccaaccccaatgcatccaaatttgcccagaagattggtggctccgagcgctgcccc
cgatgcagccaggcagtctatgctgcggagaaggtgattggtgctgggaagtcctggcat
aaggcctgctttcgatgtgccaagtgtggcaaaggccttgagtcaaccaccctggcagac
aaggatggcgagatttactgcaaaggatgttatgctaaaaacttcgggcccaagggcttt
ggttttgggcaaggagctggggccttggtccactctgagtga

KEGG   Homo sapiens (human): 8048
Entry
8048              CDS       T01001                                 
Symbol
CSRP3, CLP, CMD1M, CMH12, CRP3, LMO4, MLP
Name
(RefSeq) cysteine and glycine rich protein 3
  KO
K09377  cysteine and glycine-rich protein
Organism
hsa  Homo sapiens (human)
Pathway
hsa04820  Cytoskeleton in muscle cells
Network
nt06539  Cytoskeleton in muscle cells
  Element
N01820  Sarcomere, Z-disc
Disease
H00292  Hypertrophic cardiomyopathy
H00294  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    8048 (CSRP3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    8048 (CSRP3)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain LIM
    8048 (CSRP3)
SSDB
Motif
Pfam: LIM zf-C3HC4_IRF-2BP1_2 DUF3718 Zn_ribbon_ACC Trm112p zf_UBZ zf-C3HC4_2
Other DBs
NCBI-GeneID: 8048
NCBI-ProteinID: NP_003467
OMIM: 600824
HGNC: 2472
Ensembl: ENSG00000129170
UniProt: P50461 A2TDB8
Structure
LinkDB
Position
11:complement(19182030..19201983)
AA seq 194 aa
MPNWGGGAKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKV
CYGRRYGPKGIGYGQGAGCLSTDTGEHLGLQFQQSPKPARSVTTSNPSKFTAKFGESEKC
PRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAKNFGPTG
IGFGGLTQQVEKKE
NT seq 585 nt   +upstreamnt  +downstreamnt
atgccaaactggggcggaggcgcaaaatgtggagcctgtgaaaagaccgtctaccatgca
gaagaaatccagtgcaatggaaggagtttccacaagacgtgtttccactgcatggcctgc
aggaaggctcttgacagcacgacagtcgcggctcatgagtcggagatctactgcaaggtg
tgctatgggcgcagatatggccccaaagggatcgggtatggacaaggcgctggctgtctc
agcacagacacgggcgagcatctcggcctgcagttccaacagtccccaaagccggcacgc
tcagttaccaccagcaacccttccaaattcactgcgaagtttggagagtccgagaagtgc
cctcgatgtggcaagtcagtctatgctgctgagaaggttatgggaggtggcaagccttgg
cacaagacctgtttccgctgtgccatctgtgggaagagtctggagtccacaaatgtcact
gacaaagatggggaactttattgcaaagtttgctatgccaaaaattttggccccacgggt
attgggtttggaggccttacacaacaagtggaaaagaaagaatga

KEGG   Homo sapiens (human): 9124
Entry
9124              CDS       T01001                                 
Symbol
PDLIM1, CLIM1, CLP-36, CLP36, HEL-S-112, hCLIM1
Name
(RefSeq) PDZ and LIM domain 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
hsa  Homo sapiens (human)
Pathway
hsa04820  Cytoskeleton in muscle cells
Network
nt06539  Cytoskeleton in muscle cells
  Element
N01820  Sarcomere, Z-disc
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    9124 (PDLIM1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:hsa04990]
    9124 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:hsa04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   9124 (PDLIM1)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2 DUF8106
Other DBs
NCBI-GeneID: 9124
NCBI-ProteinID: NP_066272
OMIM: 605900
HGNC: 2067
Ensembl: ENSG00000107438
UniProt: O00151 V9HW92
Structure
LinkDB
Position
10:complement(95237572..95291003)
AA seq 329 aa
MTTQQIDLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSN
MTHLEAQNRIKGCTDNLTLTVARSEHKVWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAH
NRSAMPFTASPASSTTARVITNQYNNPAGLYSSENISNFNNALESKTAASGVEANSRPLD
HAQPPSSLVIDKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESEEKGDPNKPSGFRSV
KAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRDRHRHPECYVCTDCGTNLKQKGHFF
VEDQIYCEKHARERVTPPEGYEVVTVFPK
NT seq 990 nt   +upstreamnt  +downstreamnt
atgaccacccagcagatagacctccagggcccggggccgtggggcttccgcctcgtgggc
ggcaaggacttcgagcagcctctcgccatttcccgggtcactcctggaagcaaggcggct
ctagctaatttatgtattggagatgtaatcacagccattgatggggaaaatactagcaat
atgacacacttggaagctcagaacagaatcaaaggctgcacagacaacttgactctcact
gtagccagatctgaacataaagtctggtctcctctggtgacggaggaagggaagcgtcat
ccatacaagatgaatttagcctctgaaccccaggaggtcctgcacataggaagcgcccac
aaccgaagtgccatgccctttaccgcctcgcctgcctccagcactactgccagggtcatc
acaaaccagtacaacaacccagctggcctctactcttctgaaaatatctccaacttcaac
aatgccctggagtcaaagactgctgccagcggggtggaggcgaacagcagacccttagac
catgctcagcctccaagcagccttgtcatcgacaaagaatctgaagtttacaagatgctt
caggagaaacaggagttgaatgagcccccgaaacagtccacgtctttcttggttttgcag
gaaatcctggagtctgaagaaaaaggggatcccaacaagccctcaggattcagaagtgtt
aaagctcctgtcactaaagtggctgcgtcgattggaaatgctcagaagttgcctatgtgt
gacaaatgtggcactgggattgttggtgtgtttgtgaagctgcgggaccgtcaccgccac
cctgagtgttatgtgtgcactgactgtggcaccaacctgaaacagaagggccatttcttt
gtggaggatcaaatctactgtgagaagcatgcccgggagcgagtcacaccacctgagggt
tatgaagtggtcactgtgttccccaagtga

KEGG   Homo sapiens (human): 64236
Entry
64236             CDS       T01001                                 
Symbol
PDLIM2, MYSTIQUE, SLIM
Name
(RefSeq) PDZ and LIM domain 2
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
hsa  Homo sapiens (human)
Pathway
hsa04820  Cytoskeleton in muscle cells
Network
nt06539  Cytoskeleton in muscle cells
  Element
N01820  Sarcomere, Z-disc
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    64236 (PDLIM2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:hsa04990]
    64236 (PDLIM2)
Domain-containing proteins not elsewhere classified [BR:hsa04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   64236 (PDLIM2)
SSDB
Motif
Pfam: PDZ DUF4749 PDZ_6 LIM PDZ_2 DmmA-like_C
Other DBs
NCBI-GeneID: 64236
NCBI-ProteinID: NP_001355049
OMIM: 609722
HGNC: 13992
Ensembl: ENSG00000120913
UniProt: Q96JY6
Structure
LinkDB
Position
8:22578741..22598026
AA seq 352 aa
MALTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGM
LHAEAQSKIRQSPSPLRLQLDRSQATSPGQTNGDSSLEVLATRFQGSVRTYTESQSSLRS
SYSSPTSLSPRAGSPFSPPPSSSSLTGEAAISRSFQSLACSPGLPAADRLSYSGRPGSRQ
AGLGRAGDSAVLVLPPSPGPRSSRPSMDSEGGSLLLDEDSEVFKMLQENREGRAAPRQSS
SFRLLQEALEAEERGGTPAFLPSSLSPQSSLPASRALATPPKLHTCEKCSTSIANQAVRI
QEGRYRHPGCYTCADCGLNLKMRGHFWVGDELYCEKHARQRYSAPATLSSRA
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggcgttgacggtggatgtggccgggccagcgccctggggcttccgtatcacagggggc
agggatttccacacgcccatcatggtgactaaggtggccgagcggggcaaagccaaggac
gctgacctccggcctggagacataatcgtggccatcaacggggaaagcgcggagggcatg
ctgcatgccgaggcccagagcaagatccgccagagcccctcgcccctgcggctgcagctg
gaccggtctcaggctacgtctccagggcagaccaatggggacagctccttggaagtgctg
gcgactcgcttccagggctccgtgaggacatacactgagagtcagtcctccttaaggtcc
tcctactccagcccaacctccctcagcccgagggccggcagccccttctcaccaccaccc
tctagcagctccctcactggagaggcagccatcagccgcagcttccagagtctggcatgt
tccccgggcctccccgctgctgaccgcctgtcctactcaggccgccctggaagccgacag
gccggcctcggccgcgctggcgactcggcggtgctggtgctgccgccttccccgggccct
cgttcctccaggcccagcatggactcggaagggggaagcctcctcctggacgaggactcg
gaagtcttcaagatgctgcaggaaaatcgcgagggacgggcggccccccgacagtccagc
tcctttcggctcttgcaggaagccctggaggctgaggagagaggtggcacgccagccttc
ttgcccagctcactgagcccccagtcctccctgcccgcctccagggccctggccacccct
cccaagctccacacttgtgagaagtgcagtaccagcatcgcgaaccaggctgtgcgcatc
caggagggccggtaccgccaccccggctgctacacctgtgccgactgtgggctgaacctg
aagatgcgcgggcacttctgggtgggtgacgagctgtactgtgagaagcatgcccgccag
cgctactccgcacctgccaccctcagctctcgggcctga

KEGG   Homo sapiens (human): 27295
Entry
27295             CDS       T01001                                 
Symbol
PDLIM3, ALP
Name
(RefSeq) PDZ and LIM domain 3
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
hsa  Homo sapiens (human)
Pathway
hsa04820  Cytoskeleton in muscle cells
Network
nt06539  Cytoskeleton in muscle cells
  Element
N01820  Sarcomere, Z-disc
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    27295 (PDLIM3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:hsa04990]
    27295 (PDLIM3)
Domain-containing proteins not elsewhere classified [BR:hsa04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   27295 (PDLIM3)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 27295
NCBI-ProteinID: NP_055291
OMIM: 605889
HGNC: 20767
Ensembl: ENSG00000154553
UniProt: Q53GG5
LinkDB
Position
4:complement(185500660..185535507)
AA seq 364 aa
MPQTVILPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESM
THADAQDRIKAAAHQLCLKIDRGETHLWSPQVSEDGKAHPFKINLESEPQDGNYFEHKHN
IRPKPFVIPGRSSGCSTPSGIDCGSGRSTPSSVSTVSTICPGDLKVAAKLAPNIPLEMEL
PGVKIVHAQFNTPMQLYSDDNIMETLQGQVSTALGETPLMSEPTASVPPESDVYRMLHDN
RNEPTQPRQSGSFRVLQGMVDDGSDDRPAGTRSVRAPVTKVHGGSGGAQRMPLCDKCGSG
IVGAVVKARDKYRHPECFVCADCNLNLKQKGYFFIEGELYCETHARARTKPPEGYDTVTL
YPKA
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgccccagacggtgatcctcccgggccctgcgccctggggcttcaggctctcagggggc
atagacttcaaccagcctttggtcatcaccaggattacaccaggaagcaaggcggcagct
gccaacctgtgtcctggagatgtcatcctggctattgacggctttgggacagagtccatg
actcatgctgatgcgcaggacaggattaaagcagcagctcaccagctgtgtctcaaaatt
gacaggggagaaactcacttatggtctccacaagtatctgaagatgggaaagcccatcct
ttcaaaatcaacttagaatcagaaccacaggacgggaactactttgaacacaagcataat
attcggcccaaacctttcgtgatcccgggccgaagcagtggatgcagcactccctccggg
attgactgtggcagtggacgcagcaccccttcttctgtcagtactgttagtaccatttgc
ccaggtgacttgaaagttgcggctaagctggcccctaacattcctttggaaatggaactt
cctggtgtgaagattgtacatgctcagtttaatacacctatgcagttgtactcagatgac
aatattatggaaacactccagggtcaggtttcaacagccctaggggaaacacctttgatg
agcgagcccacagcctcggtgccccccgagtcggacgtgtaccggatgctccacgacaat
cggaatgagcccacacagcctcgccagtcgggctccttcagagtgctccagggaatggtg
gacgatggctctgatgaccgtccggctggaacgcggagtgtgagagctccggtgacgaaa
gtccatggcggttcaggcggggcacagaggatgccgctctgtgacaaatgtgggagtggc
atagtcggtgctgtggtgaaggcgcgggataagtaccggcaccctgagtgcttcgtgtgt
gccgactgcaacctcaacctcaagcaaaagggctacttcttcatagaaggggagctgtac
tgcgaaacccacgcaagagcccgcacaaagcccccagagggctatgacacggtcactctg
tatcccaaagcttaa

KEGG   Homo sapiens (human): 8572
Entry
8572              CDS       T01001                                 
Symbol
PDLIM4, RIL
Name
(RefSeq) PDZ and LIM domain 4
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
hsa  Homo sapiens (human)
Pathway
hsa04820  Cytoskeleton in muscle cells
Network
nt06539  Cytoskeleton in muscle cells
  Element
N01820  Sarcomere, Z-disc
Disease
H01593  Osteoporosis
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    8572 (PDLIM4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:hsa04990]
    8572 (PDLIM4)
Domain-containing proteins not elsewhere classified [BR:hsa04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   8572 (PDLIM4)
SSDB
Motif
Pfam: PDZ LIM DUF4749 PDZ_6
Other DBs
NCBI-GeneID: 8572
NCBI-ProteinID: NP_003678
OMIM: 603422
HGNC: 16501
Ensembl: ENSG00000131435
UniProt: P50479
Structure
LinkDB
Position
5:132257696..132273454
AA seq 330 aa
MPHSVTLRGPSPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELM
THLEAQNRIKGCHDHLTLSVSRPEGRSWPSAPDDSKAQAHRIHIDPEIQDGSPTTSRRPS
GTGTGPEDGRPSLGSPYGQPPRFPVPHNGSSEATLPAQMSTLHVSPPPSADPARGLPRSR
DCRVDLGSEVYRMLREPAEPVAAEPKQSGSFRYLQGMLEAGEGGDWPGPGGPRNLKPTAS
KLGAPLSGLQGLPECTRCGHGIVGTIVKARDKLYHPECFMCSDCGLNLKQRGYFFLDERL
YCESHAKARVKPPEGYDVVAVYPNAKVELV
NT seq 993 nt   +upstreamnt  +downstreamnt
atgccccattccgtgaccctgcgcgggccttcgccctggggcttccgcctggtgggcggc
cgggacttcagcgcgcccctcaccatctcacgggtccatgctggcagcaaggctgcattg
gctgccctgtgcccaggagacctgatccaggccatcaatggtgagagcacagagctcatg
acacacctggaggcacagaaccgcatcaagggctgccacgatcacctcacactgtctgtg
agcaggcctgagggtaggagctggcccagtgcccctgatgacagcaaggctcaggcacac
aggatccacatcgatcctgagatccaggacggcagcccaacaaccagcaggcggccctca
ggcaccgggactgggccagaagatggcagaccaagcctgggatctccatatggacaaccc
cctcgctttccagtccctcacaatggcagcagcgaggccaccctgccagcccagatgagc
accctgcatgtgtctccaccccccagcgctgacccagccagaggcctcccgcggagccgg
gactgcagagtcgacctgggctccgaggtgtacaggatgctgcgggagccagccgagccc
gtggccgcggagcccaagcagtcaggctccttccgctacttgcagggcatgctagaggcc
ggcgagggcggggattggcccgggcctggcggcccccggaacctcaagcccacggccagc
aagctgggcgctccgctgagcggcctgcaggggctgcccgagtgcacgcgctgcggccac
ggcatcgtgggcaccatcgtcaaggcacgggacaagctctaccatcccgagtgcttcatg
tgcagtgactgcggcctgaacctcaagcagcgtggttacttctttctggacgagcggctc
tactgtgagagccacgccaaggcgcgcgtgaagccgcccgagggctacgacgtggtggcg
gtgtaccccaatgccaaggtggaactcgtctga

KEGG   Homo sapiens (human): 10611
Entry
10611             CDS       T01001                                 
Symbol
PDLIM5, ENH, ENH1, L9, LIM
Name
(RefSeq) PDZ and LIM domain 5
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
hsa  Homo sapiens (human)
Pathway
hsa04820  Cytoskeleton in muscle cells
Network
nt06539  Cytoskeleton in muscle cells
  Element
N01820  Sarcomere, Z-disc
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    10611 (PDLIM5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:hsa04990]
    10611 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:hsa04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   10611 (PDLIM5)
SSDB
Motif
Pfam: LIM PDZ PDZ_6 DUF4749 PDZ_2
Other DBs
NCBI-GeneID: 10611
NCBI-ProteinID: NP_006448
OMIM: 605904
HGNC: 17468
Ensembl: ENSG00000163110
UniProt: Q96HC4
Structure
LinkDB
Position
4:94451942..94668223
AA seq 596 aa
MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGPPR
KHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESEA
DNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTAAAAFKPVGSTGVIKS
PSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAGKRTPMC
AHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECG
RCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICHG
CEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgagcaactacagtgtgtcactggttggcccagctccttggggtttccggctgcagggc
ggtaaggatttcaacatgcctctgacaatctctagtctaaaagatggcggcaaggcagcc
caggcaaatgtaagaataggcgatgtggttctcagcattgatggaataaatgcacaagga
atgactcatcttgaagcccagaataagattaagggttgtacaggctctttgaatatgact
ctgcaaagagcatctgctgcacccaagcctgagccggttcctgttcaaaagggagaacct
aaagaagtagttaaacctgtgcccattacatctcctgctgtgtccaaagtcacttccaca
aacaacatggcctacaataaggcaccacggccttttggttctgtgtcttcaccaaaagtc
acatccatcccatcaccatcgtctgccttcaccccagcccatgcgaccacctcatcacat
gcttccccttcacccgtggctgccgtcactcctcccctgttcgctgcatctggactgcat
gctaatgccaatcttagtgctgaccagtctccatctgcactgagcgctggtaaaactgca
gttaatgtcccacggcagcccacagtcaccagcgtgtgttccgagacttctcaggagcta
gcagagggacagagaagaggatcccagggtgacagtaaacagcaaaatggcccaccaaga
aaacacattgtggagcgctatacagagttttatcatgtacccactcacagtgatgccagc
aagaagagactgattgaggatactgaagactggcgtccaaggactggaacaactcagtct
cgctctttccgaatccttgcccagatcactgggactgaacatttgaaagaatctgaagcc
gataatacaaagaaggcaaataactctcaggagccttctccgcagttggcttcctcggta
gcttccacacggagcatgcccgagagcctggacagcccaacctctggcagaccaggggtt
accagcctcacagctgcagctgccttcaagcctgtaggatccactggcgtcatcaagtca
ccaagctggcaacggccaaaccaaggagtaccttccactggaagaatctcaaacagcgct
acttactcaggatcagtggcaccagccaactcagctttgggacaaacccagccaagtgac
caggacactttagtgcaaagagctgagcacattccagcagggaaacgaactccgatgtgc
gcccattgtaaccaggtcatcagaggaccattcttagtggcactggggaaatcttggcac
ccagaagaattcaactgcgctcactgcaaaaatacaatggcctacattggatttgtagag
gagaaaggagccctgtattgtgagctgtgctatgagaaattctttgcccctgaatgtggt
cgatgccaaaggaagatccttggagaagtcatcagtgcgttgaaacaaacttggcatgtt
tcctgttttgtgtgtgtagcctgtggaaagcccattcggaacaatgtttttcacttggag
gatggtgaaccctactgtgagactgattattatgccctctttggtactatatgccatgga
tgtgaatttcccatagaagctggtgacatgttcctggaagctctgggctacacctggcat
gacacttgctttgtatgctcagtgtgttgtgaaagtttggaaggtcagacctttttctcc
aagaaggacaagcccctgtgtaagaaacatgctcattctgtgaatttttga

KEGG   Homo sapiens (human): 11155
Entry
11155             CDS       T01001                                 
Symbol
LDB3, CMD1C, CMD2L, CMH24, CMPD3, CYPHER, LDB3Z1, LDB3Z4, LVNC3, MFM4, ORACLE, PDLIM6, ZASP
Name
(RefSeq) LIM domain binding 3
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
hsa  Homo sapiens (human)
Pathway
hsa04820  Cytoskeleton in muscle cells
Network
nt06539  Cytoskeleton in muscle cells
  Element
N01820  Sarcomere, Z-disc
Disease
H00292  Hypertrophic cardiomyopathy
H00294  Dilated cardiomyopathy
H00595  Myofibrillar myopathies
H01216  Left ventricular noncompaction
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    11155 (LDB3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:hsa04990]
    11155 (LDB3)
Domain-containing proteins not elsewhere classified [BR:hsa04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   11155 (LDB3)
SSDB
Motif
Pfam: LIM DUF4749 PDZ PDZ_6 LIM_FHL2-3_N PDZ_2 DUF3854
Other DBs
NCBI-GeneID: 11155
NCBI-ProteinID: NP_009009
OMIM: 605906
HGNC: 15710
Ensembl: ENSG00000122367
UniProt: O75112
Structure
LinkDB
Position
10:86666788..86736072
AA seq 727 aa
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDTNGSLVAP
SPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTSPEGARDL
LGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLPIKDLAVD
SASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEEALRRSST
PIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAPASSPADS
PRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSP
GANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAPSVAYSGG
PAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLARGTVQRAE
RFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQNNVYCER
CYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKD
YINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDRPLCKK
HAHTINL
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgtcttacagtgtgaccctgactgggcccgggccctggggcttccgtctgcaggggggc
aaggacttcaacatgcccctcactatctcccggatcacaccaggcagcaaggcagcccag
tcccagctcagccagggtgacctcgtggtggccattgacggcgtcaacacagacaccatg
acccacctggaagcccagaacaagatcaagtctgccagctacaacttgagcctcaccctg
cagaaatcaaagcgtcccattcccatctccacgacagcacctccagtccagacccctctg
ccggtgatccctcaccagaaggaccccgctctggacacgaacggcagcctggtggcaccc
agccccagccctgaggcgagggccagcccaggcaccccaggcaccccggagctcaggccc
acctttagccctgccttctcccggccctccgccttctcctcactcgccgaggcctctgac
cctggccctccgcgggccagcctgagggccaagaccagcccagagggggcccgggaccta
ctcggcccaaaagccctgccgggctcgagccagccgaggcaatataacaaccccattggc
ctgtactcggcagagaccctgagggagatggctcagatgtaccagatgagcctccgaggg
aaggcctcgggtgtcggactcccaggagggagcctccctattaaggaccttgccgtagac
agcgcctctcccgtctaccaggctgtgattaagagccagaacaagccagaagatgaggct
gacgagtgggcacgccgttcctccaacctgcagtctcgctccttccgcatcctggcccag
atgacggggacagaattcatgcaagaccctgatgaagaagctctgcgaaggtcaagcacc
cctattgagcatgcgccggtgtgcaccagccaggccaccaccccgctgctgcccgcttct
gcccagccacctgctgctgcctctcccagtgcggcttcgccacccctggccacagctgct
gcccacactgccatcgcctccgcctccaccacagcccctgcttcaagtcctgccgacagc
ccaaggccccaggcctcttcctacagccccgcagtggccgcctcttcagcacctgccacc
cacaccagctacagtgagggccccgccgcccctgcacccaagccccgggttgtcaccact
gccagcatccggccttctgtctaccagccagtgcctgcatctacctacagcccgtcccca
ggggccaattacagtcccactccctacaccccctcccctgcccctgcctacaccccctcc
cctgcccctgcctacaccccctcacctgtccccacctacactccatccccagcaccagcc
tataccccctcacctgcccccaactataaccctgcaccctcggtggcctacagcgggggc
cctgcggagcctgccagccgtccaccctgggtgacagatgatagcttctcccagaagttt
gccccgggcaagagcaccacctccatcagcaagcagaccctgccccggggaggcccagcc
tacaccccagcgggtcctcaggtgccaccacttgccagggggaccgtccagagggctgag
cgattcccagccagcagccggactccactctgcggtcactgcaacaatgtcatccggggc
ccatttctggtagccatgggccgttcttggcaccctgaagagttcacctgtgcctactgc
aagacttccctggcagatgtgtgctttgtggaagagcagaacaacgtttactgtgagcga
tgttatgagcaattctttgccccgctgtgtgccaagtgcaacaccaaaattatgggggaa
gtaatgcatgccttgagacagacatggcacaccacctgcttcgtctgtgcggcctgcaag
aagccttttgggaacagcctcttccacatggaagacggggagccctactgcgagaaagac
tacatcaatctgttcagcaccaagtgccatggctgcgatttccccgtggaggctggcgac
aagtttatcgaagccctgggccacacttggcacgacacctgcttcatttgcgcagtctgc
catgtgaatctggaggggcagccgttctactccaagaaggacagacccctgtgcaagaag
cacgcacacaccatcaacttgtag

KEGG   Homo sapiens (human): 9260
Entry
9260              CDS       T01001                                 
Symbol
PDLIM7, LMP1, LMP3
Name
(RefSeq) PDZ and LIM domain 7
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
hsa  Homo sapiens (human)
Pathway
hsa04820  Cytoskeleton in muscle cells
Network
nt06539  Cytoskeleton in muscle cells
  Element
N01820  Sarcomere, Z-disc
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    9260 (PDLIM7)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:hsa04990]
    9260 (PDLIM7)
Domain-containing proteins not elsewhere classified [BR:hsa04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   9260 (PDLIM7)
SSDB
Motif
Pfam: LIM PDZ PDZ_6 PDZ_2 Zn_Ribbon_TF DUF4749
Other DBs
NCBI-GeneID: 9260
NCBI-ProteinID: NP_005442
OMIM: 605903
HGNC: 22958
Ensembl: ENSG00000196923
UniProt: Q9NR12
Structure
LinkDB
Position
5:complement(177483394..177497604)
AA seq 457 aa
MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGS
LTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKASAPAADPPRYTFAPSVSLNKTARPFG
APPPADSAPQQNGQPLRPLVPDASKQRLMENTEDWRPRPGTGQSRSFRILAHLTGTEFMQ
DPDEEHLKKSSQVPRTEAPAPASSTPQEPWPGPTAPSPTSRPPWAVDPAFAERYAPDKTS
TVLTRHSQPATPTPLQSRTSIVQAAAGGVPGGGSNNGKTPVCHQCHKVIRGRYLVALGHA
YHPEEFVCSQCGKVLEEGGFFEEKGAIFCPPCYDVRYAPSCAKCKKKITGEIMHALKMTW
HVHCFTCAACKTPIRNRAFYMEEGVPYCERDYEKMFGTKCHGCDFKIDAGDRFLEALGFS
WHDTCFVCAICQINLEGKTFYSKKDRPLCKSHAFSHV
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggattccttcaaagtagtgctggaggggccagcaccttggggcttccggctgcaaggg
ggcaaggacttcaatgtgcccctctccatttcccggctcactcctgggggcaaagcggcg
caggccggagtggccgtgggtgactgggtgctgagcatcgatggcgagaatgcgggtagc
ctcacacacatcgaagctcagaacaagatccgggcctgcggggagcgcctcagcctgggc
ctcagcagggcccagccggttcagagcaaaccgcagaaggcctccgcccccgccgcggac
cctccgcggtacacctttgcacccagcgtctccctcaacaagacggcccggccctttggg
gcgcccccgcccgctgacagcgccccgcagcagaatggacagccgctccgaccgctggtc
ccagatgccagcaagcagcggctgatggagaacacagaggactggcggccgcggccgggg
acaggccagtcgcgttccttccgcatccttgcccacctcacaggcaccgagttcatgcaa
gacccggatgaggagcacctgaagaaatcaagccaggtgcccaggacagaagccccagcc
ccagcctcatctacaccccaggagccctggcctggccctaccgcccccagccctaccagc
cgcccgccctgggctgtggaccctgcgtttgccgagcgctatgccccggacaaaacgagc
acagtgctgacccggcacagccagccggccacgcccacgccgctgcagagccgcacctcc
attgtgcaggcagctgccggaggggtgccaggagggggcagcaacaacggcaagactccc
gtgtgtcaccagtgccacaaggtcatccggggccgctacctggtggcgctgggccacgcg
taccacccggaggagtttgtgtgtagccagtgtgggaaggtcctggaagagggtggcttc
tttgaggagaagggcgccatcttctgcccaccatgctatgacgtgcgctatgcacccagc
tgtgccaagtgcaagaagaagattacaggcgagatcatgcacgccctgaagatgacctgg
cacgtgcactgctttacctgtgctgcctgcaagacgcccatccggaacagggccttctac
atggaggagggcgtgccctattgcgagcgagactatgagaagatgtttggcacgaaatgc
catggctgtgacttcaagatcgacgctggggaccgcttcctggaggccctgggcttcagc
tggcatgacacctgcttcgtctgtgcgatatgtcagatcaacctggaaggaaagaccttc
tactccaagaaggacaggcctctctgcaagagccatgccttctctcatgtgtga

KEGG   Homo sapiens (human): 2273
Entry
2273              CDS       T01001                                 
Symbol
FHL1, FCMSU, FHL-1, FHL1A, FHL1B, FLH1A, KYOT, RBMX1A, RBMX1B, SLIM, SLIM-1, SLIM1, SLIMMER, XMPMA
Name
(RefSeq) four and a half LIM domains 1
  KO
K14365  four and a half LIM domains protein 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa04630  JAK-STAT signaling pathway
hsa04820  Cytoskeleton in muscle cells
Network
nt06539  Cytoskeleton in muscle cells
  Element
N01820  Sarcomere, Z-disc
Disease
H00563  Emery-Dreifuss muscular dystrophy
H00656  Scapuloperoneal myopathy
H00657  Reducing body myopathy
H00697  X-linked myopathy with postural muscle atrophy
H02953  Uruguay facio-cardio-musculo-skeletal syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    2273 (FHL1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    2273 (FHL1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:hsa04990]
    2273 (FHL1)
Domain-containing proteins not elsewhere classified [BR:hsa04990]
 LIM domain-containing proteins
  FHL family proteins
   2273 (FHL1)
SSDB
Motif
Pfam: LIM LIM_FHL2-3_N Ureidogly_lyase zf_C2H2_ZNF598 DUF7479
Other DBs
NCBI-GeneID: 2273
NCBI-ProteinID: NP_001153174
OMIM: 300163
HGNC: 3702
Ensembl: ENSG00000022267
UniProt: Q13642
Structure
LinkDB
Position
X:136146702..136211359
AA seq 323 aa
MAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRF
WHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGT
VWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQP
WHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGKRTVSRVSHP
VSKARKPPVCHGKRLPLTLFPSANLRGRHPGGERTCPSWVVVLYRKNRSLAAPRGPGLVK
APVWWPMKDNPGTTTASTAKNAP
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcggagaagtttgactgccactactgcagggatcccttgcaggggaagaagtatgtg
caaaaggatggccaccactgctgcctgaaatgctttgacaagttctgtgccaacacctgt
gtggaatgccgcaagcccatcggtgcggactccaaggaggtgcactataagaaccgcttc
tggcatgacacctgcttccgctgtgccaagtgccttcaccccttggccaatgagaccttt
gtggccaaggacaacaagatcctgtgcaacaagtgcaccactcgggaggactcccccaag
tgcaaggggtgcttcaaggccattgtggcaggagatcaaaacgtggagtacaaggggacc
gtctggcacaaagactgcttcacctgtagtaactgcaagcaagtcatcgggactggaagc
ttcttccctaaaggggaggacttctactgcgtgacttgccatgagaccaagtttgccaag
cattgcgtgaagtgcaacaaggccatcacatctggaggaatcacttaccaggatcagccc
tggcatgccgattgctttgtgtgtgttacctgctctaagaagctggctgggcagcgtttc
accgctgtggaggaccagtattactgcgtggattgctacaagaactttgtggccaagaag
tgtgctggatgcaagaaccccatcactgggaaaaggactgtgtcaagagtgagccaccca
gtctctaaagctaggaagcccccagtgtgccacgggaaacgcttgcctctcaccctgttt
cccagcgccaacctccggggcaggcatccgggtggagagaggacttgtccctcgtgggtg
gtggttctttatagaaaaaatcgaagcttagcagctcctcgaggcccgggtttggtaaag
gctccagtgtggtggcctatgaaggacaatcctggcacgactactgcttccactgcaaaa
aatgctccgtga

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