Homo sapiens (human): 339745
Help
Entry
339745 CDS
T01001
Gene name
SPOPL, BTBD33
Definition
(RefSeq) speckle type BTB/POZ protein like
KO
K10523
speckle-type POZ protein
Organism
hsa
Homo sapiens (human)
Pathway
hsa04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
339745 (SPOPL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsa04121
]
339745 (SPOPL)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
339745 (SPOPL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BTB
MATH
Motif
Other DBs
NCBI-GeneID:
339745
NCBI-ProteinID:
NP_001001664
HGNC:
27934
Ensembl:
ENSG00000144228
Vega:
OTTHUMG00000153635
Pharos:
Q6IQ16
(Tdark)
UniProt:
Q6IQ16
LinkDB
All DBs
Position
2q22.1
AA seq
392 aa
AA seq
DB search
MSREPTPPLPGDMSTGPIAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PSDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGHTNTNTLK
VPECRLAEDLGNLWENTRFTDCSFFVRGQEFKAHKSVLAARSPVFNAMFEHEMEESKKNR
VEINDLDPEVFKEMMRFIYTGRAPNLDKMADNLLAAADKYALERLKVMCEEALCSNLSVE
NVADTLVLADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNQATDIMETSGWKSMI
QSHPHLVAEAFRALASAQCPQFGIPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggaacccaccccacctctacctggagatatgtctactggtcccatagcagaa
agctggtgttacacacaggttaaagtagtaaaattttcctatatgtggaccattaataac
ttcagtttttgtcgagaggaaatgggtgaagtgttaaaaagttcaacattttcatctggc
ccaagtgacaaaatgaaatggtgcctgagggtaaacccaaagggattagatgatgaaagt
aaagactacttgtccttatatttgcttttagtcagctgccccaaaagtgaagttcgagca
aaattcaaattttcccttctgaatgctaaaagggaagaaacaaaagcaatggaaagccaa
agagcatatcgatttgtgcaagggaaggactggggttttaaaaaattcattagaagggac
tttttgcttgatgaagctaatggtcttttaccagatgacaagcttacattattttgtgag
gtgagtgtggtccaagattcagtaaacatatcaggacatactaatacaaatactttgaag
gtgcctgagtgtcgtctagcagaagatttaggtaatctctgggaaaacacaagatttaca
gactgcagttttttcgtgagaggacaagaatttaaagctcataaatctgtgcttgcagct
cgatctccagtttttaacgccatgtttgaacatgaaatggaagaaagcaaaaagaatcga
gtggaaataaatgatttagaccctgaagtttttaaagaaatgatgagattcatttacaca
gggagagcaccaaaccttgacaaaatggctgacaacttgttggcagctgcagacaaatat
gcactggaacggctgaaggtcatgtgcgaagaagctttgtgtagtaacctctcagtagag
aatgttgcagatacccttgtccttgcagatttgcacagtgcagaacagttgaaagcacaa
gccatagactttattaataggtgcagtgtacttcgacaacttgggtgtaaagatgggaaa
aactggaacagcaaccaagcaaccgacataatggaaacatcagggtggaagtccatgatt
cagtctcaccctcatttagtagcagaagcctttcgagcactagcatctgcacagtgtcca
cagtttggcattccacgcaaacggctaaaacagtcctga
Homo sapiens (human): 8405
Help
Entry
8405 CDS
T01001
Gene name
SPOP, BTBD32, NEDMACE, NEDMIDF, NSDVS1, NSDVS2, TEF2
Definition
(RefSeq) speckle type BTB/POZ protein
KO
K10523
speckle-type POZ protein
Organism
hsa
Homo sapiens (human)
Pathway
hsa04340
Hedgehog signaling pathway
Disease
H02461
Neurodevelopmental disorder with microcephaly
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
8405 (SPOP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsa04121
]
8405 (SPOP)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
8405 (SPOP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BTB
MATH
BACK
Motif
Other DBs
NCBI-GeneID:
8405
NCBI-ProteinID:
NP_001007227
OMIM:
602650
HGNC:
11254
Ensembl:
ENSG00000121067
Vega:
OTTHUMG00000161496
Pharos:
O43791
(Tbio)
UniProt:
O43791
LinkDB
All DBs
Structure
PDB:
3IVV
4HS2
3HQL
3HQM
3IVB
6I5P
6I68
6I41
6F8F
4O1V
6F8G
3IVQ
6I7A
3HQH
4EOZ
4J8Z
3HTM
3HQI
3HU6
2CR2
Thumbnails
Position
17q21.33
AA seq
374 aa
AA seq
DB search
MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVE
NAAEILILADLHSADQLKTQAVDFINYHASDVLETSGWKSMVVSHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggttccaagtcctccacctccggcagaaatgtcgagtggccccgtagctgag
agttggtgctacacacagatcaaggtagtgaaattctcctacatgtggaccatcaataac
tttagcttttgccgggaggaaatgggtgaagtcattaaaagttctacattttcatcagga
gcaaatgataaactgaaatggtgtttgcgagtaaaccccaaagggttagatgaagaaagc
aaagattacctgtcactttacctgttactggtcagctgtccaaagagtgaagttcgggca
aaattcaaattctccatcctgaatgccaagggagaagaaaccaaagctatggagagtcaa
cgggcatataggtttgtgcaaggcaaagactggggattcaagaaattcatccgtagagat
tttcttttggatgaggccaacgggcttctccctgatgacaagcttaccctcttctgcgag
gtgagtgttgtgcaagattctgtcaacatttctggccagaataccatgaacatggtaaag
gttcctgagtgccggctggcagatgagttaggaggactgtgggagaattcccggttcaca
gactgctgcttgtgtgttgccggccaggaattccaggctcacaaggctatcttagcagct
cgttctccggtttttagtgccatgtttgaacatgaaatggaggagagcaaaaagaatcga
gttgaaatcaatgatgtggagcctgaagtttttaaggaaatgatgtgcttcatttacacg
gggaaggctccaaacctcgacaaaatggctgatgatttgctggcagctgctgacaagtat
gccctggagcgcttaaaggtcatgtgtgaggatgccctctgcagtaacctgtccgtggag
aacgctgcagaaattctcatcctggccgacctccacagtgcagatcagttgaaaactcag
gcagtggatttcatcaactatcatgcttcggatgtcttggagacctctgggtggaagtca
atggtggtgtcacatccccacttggtggctgaggcataccgctctctggcttcagcacag
tgcccttttctgggacccccacgcaaacgcctgaagcaatcctaa
DBGET
integrated database retrieval system
