Homo sapiens (human): 51010
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Entry
51010 CDS
T01001
Symbol
EXOSC3, CGI-102, PCH1B, RRP40, Rrp40p, bA3J10.7, hRrp-40, p10
Name
(RefSeq) exosome component 3
KO
K03681
exosome complex component RRP40
Organism
hsa
Homo sapiens (human)
Pathway
hsa03018
RNA degradation
Disease
H00897
Pontocerebellar hypoplasia
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
51010 (EXOSC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
51010 (EXOSC3)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
51010 (EXOSC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP40_S1
RRP40_N_mamm
KH_6
S1_RRP4
Rrp40_N
Motif
Other DBs
NCBI-GeneID:
51010
NCBI-ProteinID:
NP_057126
OMIM:
606489
HGNC:
17944
Ensembl:
ENSG00000107371
UniProt:
Q9NQT5
Structure
PDB
PDBj
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All DBs
Position
9:complement(37779714..37785092)
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AA seq
275 aa
AA seq
DB search
MAEPASVAAESLAGSRARAARTVLGQVVLPGEELLLPEQEDAEGPGGAVERPLSLNARAC
SRVRVVCGPGLRRCGDRLLVTKCGRLRHKEPGSGSGGGVYWVDSQQKRYVPVKGDHVIGI
VTAKSGDIFKVDVGGSEPASLSYLSFEGATKRNRPNVQVGDLIYGQFVVANKDMEPEMVC
IDSCGRANGMGVIGQDGLLFKVTLGLIRKLLAPDCEIIQEVGKLYPLEIVFGMNGRIWVK
AKTIQQTLILANILEACEHMTSDQRKQIFSRLAES
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctgcgtctgtcgcggctgaatctctcgcgggcagcagggcgcgcgctgca
cgcacagtactaggtcaggtggtgctcccgggtgaggagctgctcctgccggaacaggag
gacgcggaaggccctgggggtgcagtggagcgaccgttgagcctgaatgctagagcgtgc
tcgcgggtgcgcgttgtatgcggtccgggccttcggcgctgtggggaccgcctgctggtc
accaagtgcggccgcctccgtcacaaggagcccggcagtggcagcggcggcggtgtttac
tgggtggactctcagcagaagcggtatgttccagtaaaaggagaccatgtgattggcata
gtgacagctaaatctggagatatattcaaagttgatgttggagggagtgagccagcttct
ttgtcttacttgtcatttgaaggtgcaactaaaagaaacagaccaaatgtgcaggttgga
gatctcatctatggccagtttgtggttgctaataaagacatggaaccagagatggtctgt
attgacagctgtggacgagccaatggaatgggtgtcattggacaggatggtctgcttttt
aaagtgactctgggcttaattagaaagctattagctccagattgtgaaatcatacaggaa
gtgggaaaactctatccactggagatagtatttggaatgaatggaagaatatgggttaag
gcaaaaaccatccagcagactttaattttggcaaacattttagaagcttgtgaacacatg
acgtcagatcaaagaaaacagatcttctccagattggcagaaagttga
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