Homo sapiens (human): 55062
Help
Entry
55062 CDS
T01001
Symbol
WIPI1, ATG18, ATG18A, WIPI49
Name
(RefSeq) WD repeat domain, phosphoinositide interacting 1
KO
K17908
autophagy-related protein 18
Organism
hsa
Homo sapiens (human)
Pathway
hsa04136
Autophagy - other
hsa04140
Autophagy - animal
hsa05010
Alzheimer disease
hsa05014
Amyotrophic lateral sclerosis
hsa05016
Huntington disease
hsa05017
Spinocerebellar ataxia
hsa05022
Pathways of neurodegeneration - multiple diseases
hsa05131
Shigellosis
Network
nt06128
Autophagy (viruses and bacteria)
nt06164
Kaposi sarcoma-associated herpesvirus (KSHV)
nt06228
Autophagy
nt06413
Autophagy
nt06461
Huntington disease
nt06462
Spinocerebellar ataxia
Element
N00155
Autophagy-vesicle nucleation
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
55062 (WIPI1)
04136 Autophagy - other
55062 (WIPI1)
09160 Human Diseases
09171 Infectious disease: bacterial
05131 Shigellosis
55062 (WIPI1)
09164 Neurodegenerative disease
05010 Alzheimer disease
55062 (WIPI1)
05014 Amyotrophic lateral sclerosis
55062 (WIPI1)
05016 Huntington disease
55062 (WIPI1)
05017 Spinocerebellar ataxia
55062 (WIPI1)
05022 Pathways of neurodegeneration - multiple diseases
55062 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsa04131
]
55062 (WIPI1)
03029 Mitochondrial biogenesis [BR:
hsa03029
]
55062 (WIPI1)
Membrane trafficking [BR:
hsa04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
55062 (WIPI1)
Mitochondrial biogenesis [BR:
hsa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
55062 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5711
ANAPC4_WD40
BCAS3
Motif
Other DBs
NCBI-GeneID:
55062
NCBI-ProteinID:
NP_060453
OMIM:
609224
HGNC:
25471
Ensembl:
ENSG00000070540
Pharos:
Q5MNZ9
(Tbio)
UniProt:
Q5MNZ9
LinkDB
All DBs
Position
17:complement(68421281..68457496)
Genome browser
AA seq
446 aa
AA seq
DB search
MEAEAADAPPGGVESALSCFSFNQDCTSLATGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTLLDIPANPTGLCALSINHSNSYLAYPGSLTSGEIVLYDGNSLKTVC
TIAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEQVTNSRPEEPSTWSGYMGKMFMAATNYLPTQVSDMMHQ
DRAFATARLNFSGQRNICTLSTIQKLPRLLVASSSGHLYMYNLDPQDGGECVLIKTHSLL
GSGTTEENKENDLRPSLPQSYAATVARPSASSASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGNQKGKTKQS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggccgcggacgctcccccgggcggggttgagtcggcgctcagctgcttc
tctttcaaccaggactgcacatccctagcaactggaactaaagccgggtataagctgttt
tctctgagttctgtggagcagctggatcaagtccacggaagcaatgaaatcccggacgtc
tacatcgtggagcgcctcttctccagcagcctggtggtggtagtcagtcacacaaaacca
cggcagatgaacgtgtatcacttcaagaaaggcacagagatctgtaattacagctactcc
agcaacatcttgtccataaggctgaaccggcaaaggctgctggtttgcctagaagagtcc
atttatattcacaacattaaagacatgaagctgttgaagaccctcctggatattcctgca
aacccaacaggtctatgtgctctctctatcaaccattccaattcttacctggcctatcct
ggaagcctgacttcaggggagattgtgctttatgatggaaactccctgaaaacagtctgc
actattgctgcccatgagggaacactagctgccatcaccttcaatgcctcaggctccaaa
ctagcaagtgcgtctgaaaaaggcacagtcatccgggtgttctctgtccctgatgggcaa
aagctctatgagttccggagagggatgaaaaggtatgtgacaatcagctctctagtgttc
agtatggattcacaattcctctgcgcctccagtaacaccgagacggtacacatcttcaag
ctggaacaggtcaccaacagtcgaccagaagagccttcgacctggagtggctacatggga
aagatgtttatggctgctaccaactacctccctacccaggtgtcagacatgatgcatcag
gacagggcttttgccactgcacgcttgaacttctccggacagaggaacatctgtaccctc
tcaacgatccagaagttgccacggctgctagttgcgtcatccagtggacacctttatatg
tacaatttggatcctcaggatggaggagagtgtgtcttaatcaaaacccacagcttgctt
ggctcaggaacaacagaagagaataaagaaaatgacctcagaccttccttacctcagtct
tatgcagcgaccgtagccagaccaagtgcatcttcagcctccacggtgccaggttattct
gaggacggcggggcgctgcgaggagaagttattcctgaacatgagtttgcgacgggacca
gtgtgtcttgatgatgagaatgagtttcctcctataatcttgtgccgtggaaatcagaag
ggcaaaacgaagcagtcatga
Homo sapiens (human): 26100
Help
Entry
26100 CDS
T01001
Symbol
WIPI2, ATG18B, Atg21, CGI-50, IDDSSA, WIPI-2
Name
(RefSeq) WD repeat domain, phosphoinositide interacting 2
KO
K17908
autophagy-related protein 18
Organism
hsa
Homo sapiens (human)
Pathway
hsa04136
Autophagy - other
hsa04140
Autophagy - animal
hsa05010
Alzheimer disease
hsa05014
Amyotrophic lateral sclerosis
hsa05016
Huntington disease
hsa05017
Spinocerebellar ataxia
hsa05022
Pathways of neurodegeneration - multiple diseases
hsa05131
Shigellosis
Network
nt06128
Autophagy (viruses and bacteria)
nt06164
Kaposi sarcoma-associated herpesvirus (KSHV)
nt06228
Autophagy
nt06413
Autophagy
nt06461
Huntington disease
nt06462
Spinocerebellar ataxia
Element
N00155
Autophagy-vesicle nucleation
Disease
H02346
Intellectual developmental disorder with short stature
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
26100 (WIPI2)
04136 Autophagy - other
26100 (WIPI2)
09160 Human Diseases
09171 Infectious disease: bacterial
05131 Shigellosis
26100 (WIPI2)
09164 Neurodegenerative disease
05010 Alzheimer disease
26100 (WIPI2)
05014 Amyotrophic lateral sclerosis
26100 (WIPI2)
05016 Huntington disease
26100 (WIPI2)
05017 Spinocerebellar ataxia
26100 (WIPI2)
05022 Pathways of neurodegeneration - multiple diseases
26100 (WIPI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsa04131
]
26100 (WIPI2)
03029 Mitochondrial biogenesis [BR:
hsa03029
]
26100 (WIPI2)
Membrane trafficking [BR:
hsa04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
26100 (WIPI2)
Mitochondrial biogenesis [BR:
hsa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
26100 (WIPI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
VID27
Motif
Other DBs
NCBI-GeneID:
26100
NCBI-ProteinID:
NP_056425
OMIM:
609225
HGNC:
32225
Ensembl:
ENSG00000157954
Pharos:
Q9Y4P8
(Tbio)
UniProt:
Q9Y4P8
A0A024R823
Structure
PDB
LinkDB
All DBs
Position
7:5190233..5233855
Genome browser
AA seq
454 aa
AA seq
DB search
MNLASQSGEAGAGQLLFANFNQDNTEVKGASRAAGLGRRAVVWSLAVGSKSGYKFFSLSS
VDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTIL
AVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSAT
IGEVQVFDTINLRAANMIPAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFE
FRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLM
ASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADGYLYMYNLD
PQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTYGAAAGKGTYVPSSPTRLAYT
DDLGAVGGACLEDEASALRLDEDSEHPPMILRTD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagccagagcggggaggccggcgccggccagctgctcttcgccaacttc
aaccaggacaacacagaagtgaaaggggcatcaagagcagctggtcttggccgtcgcgct
gttgtctggtccctagctgttggtagtaagtccggttataaatttttctccctttcttct
gtggataagctggaacagatctatgaatgcaccgatacggaagatgtgtgcattgtagag
agattgttctccagcagcctagtggccatcgtcagccttaaagcaccaaggaagctaaag
gtttgccactttaagaagggaactgagatctgcaactacagctactccaacacgattctg
gctgtgaagctcaacaggcagaggctgatagtatgcctggaggagtccctgtacatccac
aacattcgggacatgaaggtgctgcatacgatcagggagacgcctccaaaccctgcaggc
ctgtgtgcgctgtcaatcaacaacgacaactgctacttggcgtacccagggagcgcgacc
atcggagaggtgcaggtcttcgataccattaatttgagagctgcaaacatgattccggct
cacgacagtcctttagcggcactggcctttgacgcaagtggaactaaacttgccacggct
tcggagaaggggaccgtgattagggtattttccattccagaaggacaaaaactctttgag
tttcggagaggagtaaagaggtgcgtgagcatctgctccctggccttcagcatggacggc
atgttcctctccgcctccagcaacactgagaccgtgcacatcttcaaactcgagactgtg
aaagaaaaacccccagaggagcccaccacctggaccgggtacttcgggaaagtgctcatg
gcctccaccagctacctgccttcccaagtgacagaaatgttcaaccagggcagagccttc
gccacggtccgcctgccattctgcggccacaaaaacatctgctcgctagccacaattcag
aagatcccgcggttgttggtgggtgccgccgacgggtacctgtacatgtacaacctggac
ccccaggagggcggcgagtgtgccctgatgaagcagcaccggctggacggcagtctggaa
acgaccaatgagatcttggactctgcctctcacgactgccccttagtcactcagacatac
ggcgcagctgcaggaaaaggtacttacgtgccttcatccccaacgagacttgcctacaca
gacgacctgggtgctgtgggtggcgcctgcctggaggacgaggccagcgccctgcgcctg
gatgaggacagcgagcacccgcccatgattcttcggactgactga
Homo sapiens (human): 53349
Help
Entry
53349 CDS
T01001
Symbol
ZFYVE1, DFCP1, PPP1R172, SR3, TAFF1, ZNFN2A1
Name
(RefSeq) zinc finger FYVE-type containing 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
hsa
Homo sapiens (human)
Pathway
hsa04140
Autophagy - animal
hsa05022
Pathways of neurodegeneration - multiple diseases
Network
nt06128
Autophagy (viruses and bacteria)
nt06164
Kaposi sarcoma-associated herpesvirus (KSHV)
nt06228
Autophagy
nt06413
Autophagy
nt06461
Huntington disease
nt06462
Spinocerebellar ataxia
Element
N00155
Autophagy-vesicle nucleation
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
53349 (ZFYVE1)
09160 Human Diseases
09164 Neurodegenerative disease
05022 Pathways of neurodegeneration - multiple diseases
53349 (ZFYVE1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsa01009
]
53349 (ZFYVE1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsa04131
]
53349 (ZFYVE1)
03029 Mitochondrial biogenesis [BR:
hsa03029
]
53349 (ZFYVE1)
Protein phosphatases and associated proteins [BR:
hsa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
53349 (ZFYVE1)
Membrane trafficking [BR:
hsa04131
]
Autophagy
Other autophagy associated proteins
Others
53349 (ZFYVE1)
Mitochondrial biogenesis [BR:
hsa03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
53349 (ZFYVE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
zf-B_box
GBP
AIG1
IBR
DUF429
Motif
Other DBs
NCBI-GeneID:
53349
NCBI-ProteinID:
NP_067083
OMIM:
605471
HGNC:
13180
Ensembl:
ENSG00000165861
Pharos:
Q9HBF4
(Tbio)
UniProt:
Q9HBF4
LinkDB
All DBs
Position
14:complement(72969445..73027106)
Genome browser
AA seq
777 aa
AA seq
DB search
MSAQTSPAEKGLNPGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRNHER
IRLKPGHVPYCDLCKGLSGHLPGVRQRAIVRCQTCKINLCLECQKRTHSGGNKRRHPVTV
YNVSNLQESLEAEEMDEETKRKKMTEKVVSFLLVDENEEIQVTNEEDFIRKLDCKPDQHL
KVVSIFGNTGDGKSHTLNHTFFYGREVFKTSPTQESCTVGVWAAYDPVHKVAVIDTEGLL
GATVNLSQRTRLLLKVLAISDLVIYRTHADRLHNDLFKFLGDASEAYLKHFTKELKATTA
RCGLDVPLSTLGPAVIIFHETVHTQLLGSDHPSEVPEKLIQDRFRKLGRFPEAFSSIHYK
GTRTYNPPTDFSGLRRALEQLLENNTTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSS
FFPDEYFTCSSLCLSCGVGCKKSMNHGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGE
EVSVVPKTSASTDSPWMGLAKYAWSGYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIV
HVWPGTDGFLKDNNNAAQRLLDGMNFMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQ
ILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNV
QLAVTEAQVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILH
CHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccagacttccccagcagagaagggcctgaatccggggctgatgtgccaggaa
agttacgcttgcagcgggactgatgaagctatctttgagtgtgatgagtgctgcagtctg
cagtgtctccgctgcgaggaggagctccatcggcaggagcgcctgagaaaccatgagcgg
ataagactcaaacctggccatgtcccttactgtgacctctgcaagggtctcagtgggcat
ttaccaggtgttaggcagagggcaatagtgaggtgccagacctgcaaaattaacttgtgc
ctggagtgccagaagaggactcattctgggggtaacaaaaggagacaccctgttactgtg
tacaatgtcagtaatctccaggagtcactggaggcagaagagatggatgaggagaccaag
aggaagaagatgactgagaaggttgtgagtttcctcctagtagacgaaaatgaagaaatt
caggtaacaaatgaagaagactttattagaaaattggactgcaaacctgatcagcatctg
aaagtggtttccatttttggaaatactggtgatggaaagtctcatactctcaaccacact
ttcttttatggtcgtgaagtctttaaaacctccccgacccaggagtcctgcactgtggga
gtgtgggcagcctatgacccagttcacaaagtagcagtgatcgatacggaagggctcctg
ggggccaccgtgaatctaagccagagaacacggctgctgcttaaggtcctggccatctca
gacctcgtcatctatcgaactcatgcagaccggctgcataacgacctcttcaaattcctt
ggggatgcctcagaagcttatctgaagcacttcaccaaggagctcaaggccaccactgct
cgctgtggcctggatgtccctttatccacactgggccctgcagttatcatcttccatgag
accgtgcacacccagctactgggctctgatcatccctcagaggtgccagagaagctcatc
caggaccggttccggaagctgggccgtttccctgaagcctttagttccattcactacaag
ggaacgaggacttacaaccctcccacggacttttctgggcttcggcgtgctttggagcag
ctactagagaataacaccacccgttctccccggcacccgggagtcatcttcaaagccctg
aaggcactaagtgaccgcttcagcggtgagatccccgatgaccagatggcgcacagctcc
ttttttccagatgagtatttcacctgctcctccttgtgcctcagctgtggggttggatgt
aagaaaagcatgaatcatgggaaggaaggagtgcctcatgaagccaagagccgctgcaga
tactcccaccagtatgacaaccgagtgtatacctgcaaggcctgctatgagagaggcgag
gaagtcagtgtagtgcccaaaacatctgcttccactgactccccctggatgggtctcgca
aaatatgcctggtctgggtatgtgatcgaatgtcctaactgtggcgtggtctatcgtagt
cggcagtactggtttggaaaccaagatcctgtggatacggtggtgcggacagagattgtg
catgtgtggcctggaactgatgggtttctgaaggacaacaacaatgctgcccagcgcctg
ttggacgggatgaacttcatggctcagtcggtgtccgagcttagccttggacccaccaag
gctgtgacttcctggctgacagaccagatcgcccctgcctactggaggcccaactcccag
attctgagctgcaacaagtgtgcgacgtcctttaaagataacgacactaagcatcactgc
cgagcctgtggggagggcttctgtgacagctgttcatcaaagactcggccagtgcctgag
cggggctggggccctgcgccagtgcgggtctgtgacaactgctacgaagccaggaacgtc
cagttagctgttaccgaggcacaagtggacgatgaaggtggaacgctcattgctcggaag
gtgggcgaggccgtgcagaacactctgggagccgtggtgacagccattgacataccacta
ggtctggtaaaggacgcggccaggcctgcgtactgggtgcctgaccacgaaatcctccac
tgccacaactgccggaaggagttcagcatcaagctctccaagcaccactgccgggcctgc
ggacagggcttctgtgatgagtgctcccatgaccgccgggctgttccttctcgtggctgg
gaccatcccgtccgagtctgcttcaactgcaataaaaagcccggtgacctttaa
DBGET
integrated database retrieval system