KEGG   Homo sapiens (human): 81929
Entry
81929             CDS       T01001                                 
Symbol
SEH1L, SEC13L, SEH1A, SEH1B, Seh1
Name
(RefSeq) SEH1 like nucleoporin
  KO
K14299  nucleoporin SEH1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03013  Nucleocytoplasmic transport
hsa04150  mTOR signaling pathway
hsa05014  Amyotrophic lateral sclerosis
Network
nt06464  Amyotrophic lateral sclerosis
  Element
N01152  Nuclear export of mRNA
N01153  Mutation-caused aberrant GLE1 to nuclear export of mRNA
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    81929 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    81929 (SEH1L)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    81929 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    81929 (SEH1L)
   04131 Membrane trafficking [BR:hsa04131]
    81929 (SEH1L)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     81929 (SEH1L)
Membrane trafficking [BR:hsa04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    81929 (SEH1L)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 81929
NCBI-ProteinID: NP_112493
OMIM: 609263
HGNC: 30379
Ensembl: ENSG00000085415
Pharos: Q96EE3(Tbio)
UniProt: Q96EE3
Structure
LinkDB
Position
18:12948011..12987536
AA seq 360 aa
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSP
MIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAI
ATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGTSNPSLGSTIPSLQNSLNGSSAGRKHS
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgtttgtggctcgcagcatcgcggcggaccacaaggatctcatccacgatgtctctttc
gacttccacgggcggcggatggcaacctgctccagcgatcagagcgttaaggtctgggat
aaaagtgaaagtggtgattggcattgtactgctagctggaagacacatagtggatctgta
tggcgtgtgacatgggcccatcctgaatttgggcaggttttggcttcctgttcttttgac
cgaacagctgctgtatgggaagaaatagtaggagaatcaaatgataaactgcgaggacag
agccactgggttaaaaggacaactctggtggatagcagaacatctgttactgatgtgaag
tttgctcccaagcacatgggtcttatgttagcaacctgttccgcagatggtatagtaaga
atctatgaggcaccagatgttatgaatctcagccagtggtctttgcagcatgagatctca
tgtaagctaagctgtagttgtatttcttggaacccttcaagctctcgtgctcattccccc
atgatcgccgtaggaagtgatgacagtagccccaacgcaatggccaaggttcagattttt
gaatataatgaaaacaccaggaaatatgcaaaagctgaaactcttatgacagtcactgat
cctgttcatgatattgcattcgctccaaatttgggaagatctttccatattctagcaata
gcgaccaaagatgtgagaatttttacattaaagcctgtgaggaaagaactgacttcctct
ggtgggccaacaaagtttgaaatccatatagtggctcagttcgataatcataattctcag
gtctggcgagtgagttggaatataacaggaacggtgctagcatcttcaggagatgatggg
tgtgtaagattgtggaaagctaattatatggacaattggaagtgtactggtattttgaaa
ggtaatgggagcccagtcaatgggagttctcagcagggaacctcaaatccttccctaggt
tcaactattccaagtcttcagaattcattaaatggatcttctgctggcagaaagcacagc
tga

KEGG   Homo sapiens (human): 55746
Entry
55746             CDS       T01001                                 
Symbol
NUP133, GAMOS8, NPHS18, hNUP133
Name
(RefSeq) nucleoporin 133
  KO
K14300  nuclear pore complex protein Nup133
Organism
hsa  Homo sapiens (human)
Pathway
hsa03013  Nucleocytoplasmic transport
hsa05014  Amyotrophic lateral sclerosis
Network
nt06464  Amyotrophic lateral sclerosis
  Element
N01152  Nuclear export of mRNA
N01153  Mutation-caused aberrant GLE1 to nuclear export of mRNA
Disease
H01657  Nephrotic syndrome
H01722  Galloway-Mowat syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    55746 (NUP133)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    55746 (NUP133)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    55746 (NUP133)
   03036 Chromosome and associated proteins [BR:hsa03036]
    55746 (NUP133)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     55746 (NUP133)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    55746 (NUP133)
SSDB
Motif
Pfam: Nucleoporin_C
Other DBs
NCBI-GeneID: 55746
NCBI-ProteinID: NP_060700
OMIM: 607613
HGNC: 18016
Ensembl: ENSG00000069248
Pharos: Q8WUM0(Tbio)
UniProt: Q8WUM0
Structure
LinkDB
Position
1:complement(229440259..229508341)
AA seq 1156 aa
MFPAAPSPRTPGTGSRRGPLAGLGPGSTPRTASRKGLPLGSAVSSPVLFSPVGRRSSLSS
RGTPTRMFPHHSITESVNYDVKTFGSSLPVKVMEALTLAEVDDQLTINIDEGGWACLVCK
EKLIIWKIALSPITKLSVCKELQLPPSDFHWSADLVALSYSSPSGEAHSTQAVAVMVATR
EGSIRYWPSLAGEDTYTEAFVDSGGDKTYSFLTAVQGGSFILSSSGSQLIRLIPESSGKI
HQHILPQGQGMLSGIGRKVSSLFGILSPSSDLTLSSVLWDRERSSFYSLTSSNISKWELD
DSSEKHAYSWDINRALKENITDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLVILAAAWH
SADNPCLIYYSLITIEDNGCQMSDAVTVEVTQYNPPFQSEDLILCQLTVPNFSNQTAYLY
NESAVYVCSTGTGKFSLPQEKIVFNAQGDSVLGAGACGGVPIIFSRNSGLVSITSRENVS
ILAEDLEGSLASSVAGPNSESMIFETTTKNETIAQEDKIKLLKAAFLQYCRKDLGHAQMV
VDELFSSHSDLDSDSELDRAVTQISVDLMDDYPASDPRWAESVPEEAPGFSNTSLIILHQ
LEDKMKAHSFLMDFIHQVGLFGRLGSFPVRGTPMATRLLLCEHAEKLSAAIVLKNHHSRL
SDLVNTAILIALNKREYEIPSNLTPADVFFREVSQVDTICECLLEHEEQVLRDAPMDSIE
WAEVVINVNNILKDMLQAASHYRQNRNSLYRREESLEKEPEYVPWTATSGPGGIRTVIIR
QHEIVLKVAYPQADSNLRNIVTEQLVALIDCFLDGYVSQLKSVDKSSNRERYDNLEMEYL
QKRSDLLSPLLSLGQYLWAASLAEKYCDFDILVQMCEQTDNQSRLQRYMTQFADQNFSDF
LFRWYLEKGKRGKLLSQPISQHGQLANFLQAHEHLSWLHEINSQELEKAHATLLGLANME
TRYFAKKKTLLGLSKLAALASDFSEDMLQEKIEEMAEQERFLLHQETLPEQLLAEKQLNL
SAMPVLTAPQLIGLYICEENRRANEYDFKKALDLLEYIDEEEDININDLKLEILCKALQR
DNWSSSDGKDDPIEVSKDSIFVKILQKLLKDGIQLSEYLPEVKDLLQADQLGSLKSNPYF
EFVLKANYEYYVQGQI
NT seq 3471 nt   +upstreamnt  +downstreamnt
atgttcccagccgccccttctccgcggaccccgggtaccgggtcccgaaggggcccgctg
gccggactcgggcccggctccacgccccggacggctagcaggaagggtctgcccctgggg
tctgcagtcagctccccagtgctcttctcgccggtcggccggcgtagctcgctaagctcg
cggggaacaccaacacgaatgttcccacaccactccataactgagtctgtgaactatgat
gtgaaaacgtttggatcttctcttcctgttaaagtcatggaagccctaacattggctgaa
gtcgatgaccagctgaccattaacatagatgaaggtggatgggcttgtctggtgtgcaaa
gagaagctcattatttggaagattgctctgtcacctattactaagttatccgtttgcaaa
gaacttcagctgccacctagtgatttccactggagtgccgacttagtggctctttcttac
tcttctccctcaggtgaagcacattctactcaggctgttgctgtcatggttgccaccaga
gaaggatctatccgctattggccaagccttgctggtgaagatacctacacagaggctttt
gtagattcgggaggtgataagacttacagtttcctaacagcagtgcagggaggaagtttt
attttgtcttcatcaggaagccaactaattcggttgatacctgagagctcaggaaagatt
catcagcatatcctgcctcaggggcaaggcatgctttcaggaattggtcgaaaagtttct
tctctttttggaattttatctcctagtagtgatctcacactttcaagtgttctctgggat
agagagagatcaagcttttatagcctgacgagttcaaacatcagtaaatgggaattagat
gattcttcagaaaagcatgcatacagttgggatataaatagagccctgaaggaaaacatt
accgatgctatttggggatctgaaagtaactatgaagctattaaagaaggagtcaacatt
cgatatttggacttgaagcaaaactgtgatgggctggtgattttggcagcagcatggcac
tcagcagacaatccatgtctcatctattactctctgataacaatagaagataatggttgc
caaatgtcagatgcagttactgtagaagtcactcaatataatccaccttttcagtctgaa
gacctgattttgtgtcagttgacggtcccaaacttttcaaaccagactgcctatctgtat
aacgaaagtgctgtctatgtgtgctccacaggaactgggaaattttctcttccccaggag
aaaattgtctttaatgcacaaggagatagtgttttaggtgctggtgcctgtggtggtgtt
cctatcattttttctagaaacagtggactggtgtctattacttcaagggaaaatgtgtct
atattggcagaagacttggaagggtctttagcatcttcagttgctggaccaaacagtgag
agtatgatttttgagaccactacaaagaatgaaactatagcccaggaagataaaatcaag
ttgctgaaagctgcctttctgcaatactgcagaaaagatttaggtcatgctcaaatggtg
gttgatgagctcttttcctctcactctgatttggattctgattctgaactagacagggca
gttacccaaatcagtgtagacctgatggatgactacccagcatctgacccacggtgggct
gagtctgtccctgaggaagcacctgggttcagcaatacgtcactgattatccttcaccag
ctagaagacaagatgaaagctcactcttttcttatggactttattcatcaagttggctta
tttggacgtctaggcagttttccagttagagggacaccgatggccactcgactgttgctc
tgtgagcatgccgaaaagctgtcagccgccattgttctcaagaaccaccactcccggctt
tctgaccttgtcaacacagccatattgattgctttgaacaagagggagtatgaaatccca
tccaacctgactcctgcagatgtctttttcagggaggtatcccaagtagataccatctgt
gagtgcttactggagcatgaggagcaagtcttgagggatgcacctatggattccattgaa
tgggctgaagtggtgatcaatgtgaacaatattctcaaggatatgctgcaggctgctagt
cattatcgccaaaatagaaactctttgtatagaagagaagaatcactagaaaaagaacct
gaatatgttccatggacggcaacaagtggtcctggtggcatccgaacggtaataatacgc
cagcatgagattgtcctgaaggtggcttatccacaggcagacagcaacctccgaaacatc
gtgaccgagcagctggtagccctgatcgattgcttcctggatggttatgtttctcagctt
aagtctgtggataaatccagtaatcgggaaagatatgacaatctggagatggaataccta
cagaaaagatcagatctcttatctcctcttctttcactaggccagtacctgtgggctgct
tctctagcagagaaatactgtgactttgatatattggtacaaatgtgtgagcagactgac
aaccagagccgactccagcgctacatgacccagtttgctgatcagaatttttcagacttt
ctcttccgttggtatctggagaaaggaaagcgaggcaaattattatctcagcccatttct
cagcatggacagttggcaaattttttgcaagctcatgaacatctcagctggttacatgaa
attaatagccaagaattagaaaaggctcatgcaacacttctgggtttggcaaatatggaa
actcgttactttgcaaagaagaaaacccttcttggcttgagtaaattggctgcattagct
tcagacttttcagaggatatgctacaagaaaaaattgaagaaatggctgagcaggagcgc
tttctactgcatcaggagaccctacctgaacagctgctggcggagaaacagctaaatctc
agtgcgatgccagtattgactgcaccacaactcattggtctatatatctgtgaagaaaat
agaagagctaatgaatatgatttcaagaaagctttggacttgttggaatatattgatgag
gaagaagatataaatataaatgatctaaaactggaaatcctttgcaaagctcttcagaga
gataactggtccagttctgatggcaaagatgatccaattgaagtatctaaagacagtata
tttgtgaagatcttacagaaacttttaaaagatggcattcagctcagtgagtacttaccg
gaggtgaaagacctgctacaagcggatcagcttggaagcttaaagtccaatccttacttc
gagtttgttttgaaagcaaattatgaatattatgttcagggacaaatataa

KEGG   Homo sapiens (human): 57122
Entry
57122             CDS       T01001                                 
Symbol
NUP107, NPHS11, NUP84, ODG6, GAMOS7
Name
(RefSeq) nucleoporin 107
  KO
K14301  nuclear pore complex protein Nup107
Organism
hsa  Homo sapiens (human)
Pathway
hsa03013  Nucleocytoplasmic transport
hsa05014  Amyotrophic lateral sclerosis
Network
nt06464  Amyotrophic lateral sclerosis
  Element
N01152  Nuclear export of mRNA
N01153  Mutation-caused aberrant GLE1 to nuclear export of mRNA
Disease
H00599  Ovarian dysgenesis
H01657  Nephrotic syndrome
H01722  Galloway-Mowat syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    57122 (NUP107)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    57122 (NUP107)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    57122 (NUP107)
   03036 Chromosome and associated proteins [BR:hsa03036]
    57122 (NUP107)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     57122 (NUP107)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    57122 (NUP107)
SSDB
Motif
Pfam: Nup84_Nup100 Phage_int_M DUF2310
Other DBs
NCBI-GeneID: 57122
NCBI-ProteinID: NP_065134
OMIM: 607617
HGNC: 29914
Ensembl: ENSG00000111581
Pharos: P57740(Tbio)
UniProt: P57740
Structure
LinkDB
Position
12:68686978..68745809
AA seq 925 aa
MDRSGFGEISSPVIREAEVTRTARKQSAQKRVLLQASQDENFGNTTPRNQVIPRTPSSFR
QPFTPTSRSLLRQPDISCILGTGGKSPRLTQSSGFFGNLSMVTNLDDSNWAAAFSSQRSG
LFTNTEPHSITEDVTISAVMLREDDPGEAASMSMFSDFLQSFLKHSSSTVFDLVEEYENI
CGSQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSALEEESVF
AVTAVNASEKTVVEALFQRDSLVRQSQLVVDWLESIAKDEIGEFSDNIEFYAKSVYWENT
LHTLKQRQLTSYVGSVRPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTE
EAQRLCKRCGQAWRAATLEGWKLYHDPNVNGGTELEPVEGNPYRRIWKISCWRMAEDELF
NRYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIQTSVATLDETEELPR
EYLGANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSKSRN
NLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLIREKHTNLIAFYTCHLPQDL
AVAQYALFLESVTEFEQRHHCLELAKEADLDVATITKTVVENIRKKDNGEFSHHDLAPAL
DTGTTEEDRLKIDVIDWLVFDPAQRAEALKQGNAIMRKFLASKKHEAAKEVFVKIPQDSI
AEIYNQCEEQGMESPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSVPQKPALIPQP
TFTEKVAHEHKEKKYEMDFGIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDAKEDH
ERTHQMVLLRKLCLPMLCFLLHTILHSTGQYQECLQLADMVSSERHKLYLVFSKEELRKL
LQKLRESSLMLLDQGLDPLGYEIQL
NT seq 2778 nt   +upstreamnt  +downstreamnt
atggacaggagtggctttggagagatatcatcccctgtaatccgggaggcagaggtgaca
cggactgcacggaaacagagtgctcagaaaagagttttacttcaggcatctcaagatgaa
aattttggtaatactacaccaagaaaccaggttatccctcgaactcctagctcatttcga
cagccttttaccccaacaagccgaagcttactaaggcagccagatatttcctgcattctt
ggaacaggagggaagtcgccccgacttacgcagtcttcagggttctttggaaatctctcc
atggttactaatctggatgacagtaactgggcagctgcattttcatcacagcgttccggg
ctgttcacaaacacagagccccacagtataacagaagatgtaactatcagtgctgttatg
ttacgtgaggatgatcctggagaagctgcatccatgagtatgttttctgatttcctgcag
tcttttctgaagcactcttcgagtacagtttttgatcttgtggaagagtatgaaaacatc
tgtggtagtcaggtgaatatactgagtaaaatagtgagtcgagcaacacctggacttcaa
aaattttcaaaaacagccagtatgctctggcttcttcaacaggagatggtcacatggagg
ctgctggcttctttgtatagagacagaatacagtctgcattagaagaggaaagtgtattc
gcagttactgctgttaatgccagtgaaaaaacagttgtggaagcgttatttcagagggat
tcacttgttcgacaaagtcagctggtggtagattggttagagagtattgccaaagatgaa
attggagaattttctgataatattgagttttatgcaaaatcagtatattgggaaaatact
ctgcataccttaaaacaacggcagctgacttcttacgttggaagtgttcgtccgcttgtc
actgaattggaccctgatgctcccataagacagaaaatgccccttgatgatctggataga
gaagatgaagttagattactcaaatatctctttactctaatccgtgctggaatgacagaa
gaggcacaacgactctgtaaacgctgtggtcaagcatggagagctgcaacacttgaaggc
tggaaactgtaccatgaccctaatgttaatggaggaacagaattagaacctgttgaaggg
aatccatatagacgcatttggaaaataagttgctggagaatggcagaagatgagcttttt
aatagatacgagagagcaatttatgcagctttaagtgggaatcttaagcagctgcttcct
gtctgtgacacctgggaagacacagtttgggcctacttccgggtgatggtggacagtctg
gtagaacaggagatccagacatcagtagcaactctggatgaaactgaagaactccctaga
gaatatctgggagcaaactggacgttagaaaaggtttttgaggaacttcaagctactgac
aaaaagagagttctggaagagaatcaagaacattatcatatagttcaaaagtttcttatc
ctgggagacattgatggtttgatggatgagtttagcaaatggctttccaaaagcagaaac
aatctacctggacacctgcttcgctttatgactcaccttattttgtttttccgtactctg
ggactacagaccaaggaggaagtttctattgaagttttaaagacatacatacagctttta
ataagagagaaacatacaaatcttatagcattttatacctgtcatttgcctcaagaccta
gctgttgcccagtatgcattatttttggaaagtgttacagaatttgaacagcgccaccat
tgcctggagttggctaaagaagcagatttggatgttgcaacaataacaaaaactgtagtt
gagaatattcgaaagaaagataatggtgaatttagtcatcatgacctggccccagcccta
gatactggcactactgaggaggatcgtttaaaaattgatgtaattgactggttggtattt
gacccagcgcagagggcagaagcactgaaacaaggcaatgcaattatgagaaaattcttg
gcatcaaaaaagcacgaagctgcaaaagaagtatttgtgaaaattcctcaggattctata
gcagaaatctataatcagtgcgaggaacaaggaatggaaagtccacttcctgctgaagat
gataatgctatccgagaacatttgtgcatcagagcttatttggaagcccatgaaaccttt
aatgagtggtttaagcatatgaattcagttccacaaaaacctgctttgatacctcaacca
acttttactgagaaagtggctcatgaacacaaagaaaagaaatatgaaatggattttggt
atttggaaagggcatttggatgccctaactgctgatgtgaaggagaaaatgtataacgtc
ttgttgtttgttgatggagggtggatggtggatgttagagaggatgccaaagaagaccat
gaaagaacacatcaaatggtcttactgagaaagctttgtctgccaatgttgtgttttctg
cttcatacgatattgcacagtactggtcagtatcaggaatgcctacagttagcagatatg
gtatcctctgagcgccacaaactgtacctggtattttctaaggaagagctaaggaagttg
ctgcagaagctcagagagtcctctctaatgctcctagaccagggacttgacccattaggg
tatgaaattcagttatag

KEGG   Homo sapiens (human): 79023
Entry
79023             CDS       T01001                                 
Symbol
NUP37, MCPH24, p37
Name
(RefSeq) nucleoporin 37
  KO
K14302  nuclear pore complex protein Nup37
Organism
hsa  Homo sapiens (human)
Pathway
hsa03013  Nucleocytoplasmic transport
hsa05014  Amyotrophic lateral sclerosis
Network
nt06464  Amyotrophic lateral sclerosis
  Element
N01152  Nuclear export of mRNA
N01153  Mutation-caused aberrant GLE1 to nuclear export of mRNA
Disease
H00269  Primary microcephaly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    79023 (NUP37)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    79023 (NUP37)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    79023 (NUP37)
   03036 Chromosome and associated proteins [BR:hsa03036]
    79023 (NUP37)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     79023 (NUP37)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    79023 (NUP37)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 79023
NCBI-ProteinID: NP_076962
OMIM: 609264
HGNC: 29929
Ensembl: ENSG00000075188
Pharos: Q8NFH4(Tdark)
UniProt: Q8NFH4
Structure
LinkDB
Position
12:complement(102073103..102120114)
AA seq 326 aa
MKQDASRNAAYTVDCEDYVHVVEFNPFENGDSGNLIAYGGNNYVVIGTCTFQEEEADVEG
IQYKTLRTFHHGVRVDGIAWSPETRLDSLPPVIKFCTSAADMKIRLFTSDLQDKNEYKVL
EGHTDFINGLVFDPKEGQEIASVSDDHTCRIWNLEGVQTAHFVLHSPGMSVCWHPEETFK
LMVAEKNGTIRFYDLLAQQAILSLESEQVPLMSAHWCLKNTFKVGAVAGNDWLIWDITRS
SYPQNKRPVHMDRACLFRWSTISENLFATTGYPGKMASQFQIHHLGHPQPILMGSVAVGS
GLSWHRTLPLCVIGGDHKLLFWVTEV
NT seq 981 nt   +upstreamnt  +downstreamnt
atgaagcaagatgcctcaagaaatgctgcctacactgtggattgtgaagattatgtgcat
gtggtagaatttaatccctttgagaatggggattcaggaaacctaattgcatatggtggc
aataattatgtggtcattggcacgtgtacgtttcaggaagaagaagcagacgttgaaggc
attcagtataaaacacttcgaacatttcaccatggagtcagggttgatggcatagcttgg
agcccagagactagacttgattcattgcctccagtaatcaaattttgtacttcagctgct
gatatgaaaattagattatttacttcagatcttcaggataaaaatgaatataaggtttta
gagggccataccgatttcattaatggtttggtgtttgatcccaaagaaggccaagaaatt
gcaagtgtgagtgacgatcacacctgcaggatttggaacttggaaggagtgcaaacagct
cattttgttcttcattctcctggcatgagtgtgtgctggcatcctgaggagacttttaag
ctaatggttgcagagaagaatggaacaatccggttttatgatcttttggcccaacaggct
attttatctcttgaatcagaacaagtgccattaatgtcagcacactggtgcttaaaaaac
accttcaaagttggagccgttgcaggaaatgattggttaatttgggatattactcggtcc
agttatcctcaaaataagagacctgttcacatggatcgagcctgcttattcaggtggtcc
acaattagtgaaaatctgtttgcaaccactggttatcctggcaaaatggcaagccagttt
caaattcatcatttaggacaccctcagcccatcctcatgggttctgtagccgttggatct
ggactgtcctggcatcgaactctccctctgtgtgtaattggaggagaccacaagctgttg
ttttgggtgactgaagtataa

KEGG   Homo sapiens (human): 23279
Entry
23279             CDS       T01001                                 
Symbol
NUP160, NPHS19
Name
(RefSeq) nucleoporin 160
  KO
K14303  nuclear pore complex protein Nup160
Organism
hsa  Homo sapiens (human)
Pathway
hsa03013  Nucleocytoplasmic transport
hsa05014  Amyotrophic lateral sclerosis
Network
nt06464  Amyotrophic lateral sclerosis
  Element
N01152  Nuclear export of mRNA
N01153  Mutation-caused aberrant GLE1 to nuclear export of mRNA
Disease
H01657  Nephrotic syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    23279 (NUP160)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    23279 (NUP160)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    23279 (NUP160)
   03036 Chromosome and associated proteins [BR:hsa03036]
    23279 (NUP160)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     23279 (NUP160)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    23279 (NUP160)
SSDB
Motif
Pfam: Nup160
Other DBs
NCBI-GeneID: 23279
NCBI-ProteinID: NP_056046
OMIM: 607614
HGNC: 18017
Ensembl: ENSG00000030066
Pharos: Q12769(Tbio)
UniProt: Q12769
Structure
LinkDB
Position
11:complement(47778118..47848544)
AA seq 1402 aa
MAAAGALERSFVELSGAERERPRHFREFTVCSIGTANAVAGAVKYSESAGGFYYVESGKL
FSVTRNRFIHWKTSGDTLELMEESLDINLLNNAIRLKFQNCSVLPGGVYVSETQNRVIIL
MLTNQTVHRLLLPHPSRMYRSELVVDSQMQSIFTDIGKVDFTDPCNYQLIPAVPGISPNS
TASTAWLSSDGEALFALPCASGGIFVLKLPPYDIPGMVSVVELKQSSVMQRLLTGWMPTA
IRGDQSPSDRPLSLAVHCVEHDAFIFALCQDHKLRMWSYKEQMCLMVADMLEYVPVKKDL
RLTAGTGHKLRLAYSPTMGLYLGIYMHAPKRGQFCIFQLVSTESNRYSLDHISSLFTSQE
TLIDFALTSTDIWALWHDAENQTVVKYINFEHNVAGQWNPVFMQPLPEEEIVIRDDQDPR
EMYLQSLFTPGQFTNEALCKALQIFCRGTERNLDLSWSELKKEVTLAVENELQGSVTEYE
FSQEEFRNLQQEFWCKFYACCLQYQEALSHPLALHLNPHTNMVCLLKKGYLSFLIPSSLV
DHLYLLPYENLLTEDETTISDDVDIARDVICLIKCLRLIEESVTVDMSVIMEMSCYNLQS
PEKAAEQILEDMITIDVENVMEDICSKLQEIRNPIHAIGLLIREMDYETEVEMEKGFNPA
QPLNIRMNLTQLYGSNTAGYIVCRGVHKIASTRFLICRDLLILQQLLMRLGDAVIWGTGQ
LFQAQQDLLHRTAPLLLSYYLIKWGSECLATDVPLDTLESNLQHLSVLELTDSGALMANR
FVSSPQTIVELFFQEVARKHIISHLFSQPKAPLSQTGLNWPEMITAITSYLLQLLWPSNP
GCLFLECLMGNCQYVQLQDYIQLLHPWCQVNVGSCRFMLGRCYLVTGEGQKALECFCQAA
SEVGKEEFLDRLIRSEDGEIVSTPRLQYYDKVLRLLDVIGLPELVIQLATSAITEAGDDW
KSQATLRTCIFKHHLDLGHNSQAYEALTQIPDSSRQLDCLRQLVVVLCERSQLQDLVEFP
YVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRT
LRGLEKQGNCYLAALNCLRLIRPEYAWIVQPVSGAVYDRPGASPKRNHDGECTAAPTNRQ
IEILELEDLEKECSLARIRLTLAQHDPSAVAVAGSSSAEEMVTLLVQAGLFDTAISLCQT
FKLPLTPVFEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKESSATDEAWRLLST
YLERYKVQNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVDLV
SEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALGENSANSHNIALSQKILD
KLEDYQQKVDKATRDLLYRRTL
NT seq 4209 nt   +upstreamnt  +downstreamnt
atggcggcggcgggagccctggaacggagcttcgtggagctaagcggagctgagcgcgaa
aggccgaggcactttcgggaattcacagtctgcagcattgggactgcaaatgccgtggct
ggcgccgtaaaatacagtgaaagcgcgggaggcttttactacgtggagagtggcaagttg
ttctccgtaaccagaaacaggttcattcattggaagacctctggagatacattggagctg
atggaggagtcactggacataaatctgttgaataatgccattcgcctaaaattccaaaat
tgcagtgttttacctggaggggtttatgtctctgagactcagaatcgtgtgataatcttg
atgttaaccaatcaaacagtgcacaggttacttttaccacacccctcccggatgtatagg
agtgagttggtagttgacagtcagatgcagtcaatattcactgacattggaaaagttgat
ttcacagatccttgcaactatcagttaattccagcagtacctggaatatctcctaattcc
accgcctctacagcctggctcagcagtgatggggaggccctgtttgccttaccatgtgct
tctgggggaatctttgttcttaagctacctccttatgacatacctggtatggtgtcagtc
gtggaactgaaacagagttcagtaatgcaacgattgcttacaggctggatgccaacagct
atcaggggtgaccagtcgccttcagatcgtcccctcagtcttgctgttcattgtgtggag
catgatgccttcatctttgctttgtgtcaggatcataaactacgaatgtggtcttacaag
gagcaaatgtgcctaatggtagctgacatgctggagtatgtccctgtgaagaaagacctt
cggcttactgctggaactggacacaaattacggcttgcttattcccccaccatgggactc
tacctggggatatacatgcatgcaccaaaacgaggacagttctgcattttccagttggtg
agcactgagagtaatcgctatagtctcgatcatatttcttcactgttcacttctcaggag
acactgattgactttgccttaacttccacggatatctgggccctgtggcatgatgctgag
aaccaaacagtagtgaaatacatcaactttgaacataatgttgcaggtcagtggaatcca
gtttttatgcagcctctgccagaggaagagattgtcatcagagatgatcaagaccccaga
gagatgtatctgcaaagtctttttacaccaggacaattcacaaatgaagctttatgtaag
gctttacagattttctgccgaggaactgagaggaatttggatctttcctggagtgaactg
aagaaagaagttactttagctgttgaaaatgagcttcaaggaagtgtaacagagtatgaa
ttctcccaggaggagtttcgaaatttacaacaagaattctggtgcaagttctatgcctgt
tgtcttcagtatcaagaagccctctctcaccctcttgccctacatttgaatccacacaca
aacatggtgtgcctgctgaaaaaagggtacctgtctttccttattccctcatccttagtg
gatcatttgtatctcctgccttatgagaaccttttgacagaagatgagacaaccatatct
gatgatgtggacatcgctcgggatgtcatatgtcttataaaatgcctccggctgattgaa
gagtcagtaactgtggatatgtcagttataatggaaatgagttgttataacctacagtct
ccggaaaaggctgcagagcagattctggaagatatgatcactattgatgtagaaaatgtg
atggaggatatttgtagtaaactgcaagagattaggaacccaatccatgcaattggacta
cttatacgggaaatggattatgaaacagaagtggaaatggaaaagggattcaatccagct
cagcctttgaatattcgaatgaatcttacccagctctatggtagtaacacagcagggtat
attgtgtgcagaggggtgcataaaatcgccagtactcgtttcctgatctgcagagatctt
ttgatcttacagcagctgttaatgaggcttggagatgctgtgatttggggaactggtcag
ctctttcaagctcagcaagacctactacatcgaacagctcccctactcttatcttattac
ctcattaaatggggaagtgagtgcttggcaactgatgttccacttgacacactggagtct
aatctccaacacttatcagtactggaattaacagactctggtgctttaatggcaaatagg
tttgtatctagtcctcagactattgtggagttattcttccaagaagttgcaagaaaacac
attatatctcacctcttctctcagccaaaggcacctctgagccaaactggattgaattgg
cctgaaatgattactgcaattaccagttatttattgcagcttttatggcctagcaatcct
ggttgtctctttctagaatgtttgatgggaaattgccaatatgtacaattgcaggattat
attcaactgctacatccctggtgtcaagtcaatgttggttcctgtcgatttatgctggga
aggtgttacctagttacaggagaaggacagaaggctctggaatgtttttgtcaggcagca
tctgaagtaggcaaagaggaattcttggatcgcttgattcgctcagaggatggggagatc
gtgtctacccccaggctgcagtattatgacaaggttttacgactactagatgtcattggt
ttgcctgaactggttattcagttggctacatcagccataactgaagcaggtgatgactgg
aaaagtcaggctactctaaggacatgtattttcaaacatcatttggatttgggtcacaat
agccaagcatatgaagccttaacccaaattcctgattccagcaggcaattagattgttta
cggcagttggtggtagttctttgtgaacgctcacagctacaggatcttgtagagtttccc
tatgtgaatctgcataatgaggttgtgggaataattgagtcacgtgctagagctgtggac
cttatgactcacaattactatgaacttctgtatgcctttcacatctatcgccacaattac
cgcaaggctggcacagtgatgtttgagtatggaatgcggcttggcagagaagttcgaact
ctccggggacttgagaaacaaggcaactgttatctggctgctctcaattgtttacgactt
attcgtccagaatatgcgtggattgtgcagccagtgtctggtgcagtgtatgatcgccct
ggagcatcccctaagaggaatcatgatggagaatgcacagctgcccccacaaatcgacaa
attgaaatcctggaactggaagatctggagaaagagtgttccttggctcgcatccgcctc
actttggctcagcatgatccatcagcggttgcagttgctggaagttcatcagcagaggaa
atggtcactctcttggttcaggcgggcctctttgacactgccatatcactctgtcagact
tttaagcttcccttaacgccagtctttgaagggcttgccttcaaatgcatcaaattgcaa
tttggaggagaggcagcacaagcagaagcctgggcctggctagcagccaatcagctctca
tctgtcatcactactaaggagtctagtgctacagatgaagcatggcgactattatccact
tacctggagaggtacaaagtccagaataacttgtatcaccactgtgtaatcaacaagctc
ttgtctcatggagtgcctctgcctaattggcttataaacagttacaagaaggttgatgct
gctgaattgcttcgtttatacttaaactatgaccttttagaagaagctgtggatttggtg
tcagaatatgtggatgctgtattgggaaaaggacatcaatacttcggaattgagtttcca
ctgtccgcaacagccccaatggtgtggcttccatactcctctattgatcagcttctccaa
gctctgggagagaacagtgccaacagtcacaacatcgcactgtcccagaaaatacttgac
aaattggaggactaccagcaaaaagttgataaggcaacacgggatttattatatcgtcgg
accttgtga

KEGG   Homo sapiens (human): 79902
Entry
79902             CDS       T01001                                 
Symbol
NUP85, FROUNT, NPHS17, Nup75
Name
(RefSeq) nucleoporin 85
  KO
K14304  nuclear pore complex protein Nup85
Organism
hsa  Homo sapiens (human)
Pathway
hsa03013  Nucleocytoplasmic transport
hsa05014  Amyotrophic lateral sclerosis
Network
nt06464  Amyotrophic lateral sclerosis
  Element
N01152  Nuclear export of mRNA
N01153  Mutation-caused aberrant GLE1 to nuclear export of mRNA
Disease
H01657  Nephrotic syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    79902 (NUP85)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    79902 (NUP85)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    79902 (NUP85)
   03036 Chromosome and associated proteins [BR:hsa03036]
    79902 (NUP85)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     79902 (NUP85)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    79902 (NUP85)
SSDB
Motif
Pfam: Nucleopor_Nup85 TPR_4
Other DBs
NCBI-GeneID: 79902
NCBI-ProteinID: NP_079120
OMIM: 170285
HGNC: 8734
Ensembl: ENSG00000125450
Pharos: Q9BW27(Tbio)
UniProt: Q9BW27
Structure
LinkDB
Position
17:75205679..75235758
AA seq 656 aa
MEELDGEPTVTLIPGVNSKKNQMYFDWGPGEMLVCETSFNKKEKSEMVPSCPFIYIIRKD
VDVYSQILRKLFNESHGIFLGLQRIDEELTGKSRKSQLVRVSKNYRSVIRACMEEMHQVA
IAAKDPANGRQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSL
SADVLGSENPSKHDSFWNLVTILVLQGRLDEARQMLSKEADASPASAGICRIMGDLMRTM
PILSPGNTQTLTELELKWQHWHEECERYLQDSTFATSPHLESLLKIMLGDEAALLEQKEL
LSNWYHFLVTRLLYSNPTVKPIDLHYYAQSSLDLFLGGESSPEPLDNILLAAFEFDIHQV
IKECSIALSNWWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFAHPSLWQLG
VDYFDYCPELGRVSLELHIERIPLNTEQKALKVLRICEQRQMTEQVRSICKILAMKAVRN
NRLGSALSWSIRAKDAAFATLVSDRFLRDYCERGCFSDLDLIDNLGPAMMLSDRLTFLGK
YREFHRMYGEKRFADAASLLLSLMTSRIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYEL
MRCLEDLTSRRPVHGESDTEQLQDDDIETTKVEMLRLSLARNLARAIIREGSLEGS
NT seq 1971 nt   +upstreamnt  +downstreamnt
atggaggagctcgatggcgagccaacagtcactttgattccaggcgtgaattccaagaag
aaccaaatgtattttgactggggtccaggggagatgctggtatgtgaaacctccttcaac
aaaaaagaaaaatcagagatggtgccaagttgcccctttatctatatcatccgtaaggat
gtagatgtttactctcaaatcttgagaaaactcttcaatgaatcccatggaatctttctg
ggcctccagagaattgacgaagagttgactggaaaatccagaaaatctcaattggttcga
gtgagtaaaaactaccgatcagtcatcagagcatgtatggaggaaatgcaccaggttgca
attgctgctaaagatccagccaatggccgccagttcagcagccaggtctccattttgtca
gcaatggagctcatctggaacctgtgtgagattctttttattgaagtggccccagctggc
cctctcctcctccatctccttgactgggtccggctccatgtgtgcgaggtggacagtttg
tcggcagatgttctgggcagtgagaatccaagcaaacatgacagcttctggaacttggtg
accatcttggtgctgcagggccggctggatgaggcccgacagatgctctccaaggaagcc
gatgccagccccgcctctgcaggcatatgccgaatcatgggggacctgatgaggacaatg
cccattcttagtcccgggaacacccagacactgacagagctggagctgaagtggcagcac
tggcacgaggaatgtgagcggtacctccaggacagcacattcgccaccagccctcacctg
gagtctctcttgaagattatgctgggagacgaagctgccttgttagagcagaaggaactt
ctgagtaattggtatcatttcctagtgactcggctcttgtactccaatcccacagtaaaa
cccattgatctgcactactatgcccagtccagcctggacctgtttctgggaggtgagagc
agcccagaacccctggacaacatcttgttggcagcctttgagtttgacatccatcaagta
atcaaagagtgcagcatcgccctgagcaactggtggtttgtggcccacctgacagacctg
ctggaccactgcaagctcctccagtcacacaacctctatttcggttccaacatgagagag
ttcctcctgctggagtacgcctcgggactgtttgctcatcccagcctgtggcagctgggg
gtcgattactttgattactgccccgagctgggccgagtctccctggagctgcacattgag
cggatacctctgaacaccgagcagaaagccctgaaggtgctgcggatctgtgagcagcgg
cagatgactgaacaagttcgcagcatttgtaagatcttagccatgaaagccgtccgcaac
aatcgcctgggttctgccctctcttggagcatccgtgctaaggatgccgcctttgccacg
ctcgtgtcagacaggttcctcagggattactgtgagcgaggctgcttttctgatttggat
ctcattgacaacctggggccagccatgatgctcagtgaccgactgacattcctgggaaag
tatcgcgagttccaccgtatgtacggggagaagcgttttgccgacgcagcttctctcctt
ctgtccttgatgacgtctcggattgcccctcggtctttctggatgactctgctgacagac
gccttgccccttttggaacagaaacaggtgattttctcagcagaacagacttatgagttg
atgcggtgtctggaggacttgacgtcaagaagacctgtgcatggagaatctgataccgag
cagctccaggatgatgacatagagaccaccaaggtggaaatgctgagactttctctggca
cgaaatcttgctcgggcaattataagagaaggctcactggaaggttcctga

KEGG   Homo sapiens (human): 348995
Entry
348995            CDS       T01001                                 
Symbol
NUP43, bA350J20.1, p42
Name
(RefSeq) nucleoporin 43
  KO
K14305  nuclear pore complex protein Nup43
Organism
hsa  Homo sapiens (human)
Pathway
hsa03013  Nucleocytoplasmic transport
hsa05014  Amyotrophic lateral sclerosis
Network
nt06464  Amyotrophic lateral sclerosis
  Element
N01152  Nuclear export of mRNA
N01153  Mutation-caused aberrant GLE1 to nuclear export of mRNA
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    348995 (NUP43)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    348995 (NUP43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    348995 (NUP43)
   03036 Chromosome and associated proteins [BR:hsa03036]
    348995 (NUP43)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     348995 (NUP43)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    348995 (NUP43)
SSDB
Motif
Pfam: WD40
Other DBs
NCBI-GeneID: 348995
NCBI-ProteinID: NP_942590
OMIM: 608141
HGNC: 21182
Ensembl: ENSG00000120253
Pharos: Q8NFH3(Tdark)
UniProt: Q8NFH3 Q8TEA6
Structure
LinkDB
Position
6:complement(149724315..149749358)
AA seq 380 aa
MEEIYAKFVSQKISKTRWRPLPPGSLQTAETFATGSWDNEENYISLWSIGDFGNLDSDGG
FEGDHQLLCDIRHHGDVMDLQFFDQERIVAASSTGCVTVFLHHPNNQTLSVNQQWTTAHY
HTGPGSPSYSSAPCTGVVCNNPEIVTVGEDGRINLFRADHKEAVRTIDNADSSTLHAVTF
LRTPEILTVNSIGQLKIWDFRQQGNEPSQILSLTGDRVPLHCVDRHPNQQHVVATGGQDG
MLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPEHLFTCSEDGSLWHWDASTDVPEKSS
LFHQGGRSSTFLSHSISNQANVHQSVISSWLSTDPAKDRIEITSLLPSRSLSVNTLDVLG
PCLVCGTDAEAIYVTRHLFS
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggaggaaatttatgcgaagtttgtgtcccagaaaatcagcaaaacccgctggcgaccg
ctgcctccgggaagtttacagaccgcggagacgttcgctacaggatcttgggacaatgag
gaaaattatatttcactgtggtctattggagattttggaaacttggactctgatggaggg
tttgaaggagaccatcagttattgtgtgatatcagacaccatggtgatgtaatggattta
cagttttttgaccaggaaagaattgtcgctgcttcatcaacaggatgtgtaacagttttc
cttcaccatccaaataaccagactctgtcagtcaaccagcagtggactacagctcactac
cacacaggccctggcagtccttcctatagcagtgcaccatgtacaggtgttgtgtgcaac
aacccagaaatcgttacagttggagaggatggtcgaataaatctcttcagagctgatcac
aaggaagctgtaagaaccatagacaatgcagatagtagtacactccatgctgtaaccttt
cttcgaactcctgagattcttactgtaaattcaattggacagttgaaaatatgggatttc
agacaacaaggaaatgagccttctcagatattgtcactgactggtgaccgagtgccactc
cactgtgttgatagacatcccaaccaacagcatgttgtagctactggtggccaagatgga
atgttgagtatttgggatgttagacaaggtactatgcctgtatctctgctgaaggctcat
gaagctgaaatgtgggaagttcactttcacccatccaacccagaacatctttttacctgc
tctgaagatggatccctctggcactgggatgcttccacagatgtacctgaaaagtcgtca
ctctttcaccaaggaggaagaagcagtacttttttgtctcatagcattagtaaccaagct
aatgttcaccagtctgtcattagctcctggctcagcactgatcctgcaaaagaccgaatt
gaaatcacaagcttacttcccagtaggtctctgtctgtgaacactttggatgttttaggt
ccttgtcttgtttgtggaaccgatgcagaagcaatttatgttactagacatcttttttcg
tag

KEGG   Homo sapiens (human): 23636
Entry
23636             CDS       T01001                                 
Symbol
NUP62, IBSN, SNDI, p62
Name
(RefSeq) nucleoporin 62
  KO
K14306  nuclear pore complex protein Nup62
Organism
hsa  Homo sapiens (human)
Pathway
hsa03013  Nucleocytoplasmic transport
hsa05014  Amyotrophic lateral sclerosis
Network
nt06464  Amyotrophic lateral sclerosis
  Element
N01152  Nuclear export of mRNA
N01153  Mutation-caused aberrant GLE1 to nuclear export of mRNA
Disease
H01177  Infantile bilateral striatal necrosis
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    23636 (NUP62)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    23636 (NUP62)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    23636 (NUP62)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     23636 (NUP62)
SSDB
Motif
Pfam: Nsp1_C DUF4164 Exonuc_VII_L
Other DBs
NCBI-GeneID: 23636
NCBI-ProteinID: NP_001180286
OMIM: 605815
HGNC: 8066
Ensembl: ENSG00000213024
Pharos: P37198(Tbio)
UniProt: P37198
Structure
LinkDB
Position
19:complement(49906825..49929504)
AA seq 522 aa
MSGFNFGGTGAPTGGFTFGTAKTATTTPATGFSFSTSGTGGFNFGAPFQPATSTPSTGLF
SLATQTPATQTTGFTFGTATLASGGTGFSLGIGASKLNLSNTAATPAMANPSGFGLGSSN
LTNAISSTVTSSQGTAPTGFVFGPSTTSVAPATTSGGFSFTGGSTAQPSGFNIGSAGNSA
QPTAPATLPFTPATPAATTAGATQPAAPTPTATITSTGPSLFASIATAPTSSATTGLSLC
TPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATATTTSSSSTTGFALNLKPLAPA
GIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQLESLINKWSLELEDQERHFLQQATQVNA
WDRTLIENGEKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLSPLEELVKEQSGT
IYLQHADEEREKTYKLAENIDAQLKRMAQDLKDIIEHLNTSGAPADTSDPLQQICKILNA
HMDSLQWIDQNSALLQRKVEEVTKVCEGRRKEQERSFRITFD
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgagcgggtttaattttggaggcactggggcccctacaggcgggttcacgtttggcact
gcaaagacggcaacaaccacacctgctacagggttttctttctccacctctggcactgga
gggtttaattttggggctcccttccaaccagccacaagtaccccttccaccggcctgttc
tcacttgccacccagactccggccacacagacgacaggcttcacttttggaacagcgact
cttgcttcggggggaactggattttctttggggatcggtgcttcaaagctcaacttgagc
aacacagctgccaccccagccatggcaaaccccagcggctttgggctgggcagcagcaac
ctcactaatgccatatcgagcaccgtcacctccagccagggcacagcacccaccggcttt
gtgtttggcccctccaccacctctgtggctccagctaccacatctggaggcttctcattc
actggtggaagcacggcccaaccctccggtttcaacattggctcagcagggaattcagcc
cagcccacggcacctgccacgttgcccttcactccggccacgccagcagccaccacagca
ggtgccacacagccagctgctcccacacccacagccaccatcaccagcactgggcccagc
ctctttgcgtcaatagcaactgctccaacctcatctgccaccactggactctccctctgt
acccctgtgaccacagcgggcgcccccactgctgggacacagggcttcagcttaaaggca
cctggagcagcttccggcacctccacaacaacatccaccgctgccaccgccaccgccacc
accaccagcagcagcagcaccaccggctttgccttgaatttaaaaccactggcgccagcc
gggatccccagcaatacagcagctgccgtgaccgctccacctggccctggcgcagctgca
ggggcggctgccagctccgccatgacctacgcgcagctggagagcctgatcaacaaatgg
agcctggagctagaggaccaggagcggcacttcctccagcaggccacccaggtcaacgcc
tgggaccgcacgctgatcgagaatggagaaaagatcaccagcctgcaccgcgaggtggag
aaggtgaagctggaccagaagaggctggaccaggagctcgacttcatcctgtcccagcag
aaggagctggaagacctgctgagcccactggaggagttggtcaaggagcagagcgggacc
atctacctgcagcacgcggatgaggagcgtgagaaaacctacaagctggctgagaacatc
gatgcacagctcaagcgcatggcccaggatctcaaggacatcatcgagcacctgaacacg
tccggggcccccgccgacaccagtgacccactgcagcagatctgcaagatcctcaatgcg
cacatggactcactgcagtggatcgaccagaactcggccctgctgcagaggaaggtggag
gaggtgaccaaggtgtgcgagggccggcgcaaggagcaggagcgcagcttccggatcacc
tttgactga

KEGG   Homo sapiens (human): 9818
Entry
9818              CDS       T01001                                 
Symbol
NUP58, NUP45, NUPL1, PRO2463
Name
(RefSeq) nucleoporin 58
  KO
K14307  nucleoporin p58/p45
Organism
hsa  Homo sapiens (human)
Pathway
hsa03013  Nucleocytoplasmic transport
hsa05014  Amyotrophic lateral sclerosis
Network
nt06464  Amyotrophic lateral sclerosis
  Element
N01152  Nuclear export of mRNA
N01153  Mutation-caused aberrant GLE1 to nuclear export of mRNA
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    9818 (NUP58)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    9818 (NUP58)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    9818 (NUP58)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     9818 (NUP58)
SSDB
Motif
Pfam: Nucleoporin_FG2 FapA PSY3 Nup49_C ASNSD1-SEP
Other DBs
NCBI-GeneID: 9818
NCBI-ProteinID: NP_054808
OMIM: 607615
HGNC: 20261
Ensembl: ENSG00000139496
Pharos: Q9BVL2(Tdark)
UniProt: Q9BVL2
Structure
LinkDB
Position
13:25301625..25349800
AA seq 599 aa
MSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSVGLNFGNLGSTSTPATTSAPS
SGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPATTSAATTGFSLGFNKPAASAT
PFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTATTTTASTGLSLGGALAGLGG
SLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGIDFSSSSDKKSDKTGTRPEDSK
ALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAANG
IQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYAAPADYFRILVQQFEVQLQQY
RQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLGY
RKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPNAAAVAMAATLTQQQQPATGP
QPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGTSSGFGCSTTGASTFGFGTTNKPSGS
LSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRGKR
NT seq 1800 nt   +upstreamnt  +downstreamnt
atgtccacagggttctccttcgggtccgggactctgggctccaccaccgtggccgccggc
gggaccagcacaggcggcgttttctccttcggaacgggagcgtctagcaacccttctgtg
gggctcaattttggaaatcttggaagtacttcaactccagcaactacatctgctccttca
agtggttttggaaccgggctctttggatctaaacctgccactgggttcactctaggagga
acaaatacaggaatagcaacaactataactacaggattaactctgggaacgccagccact
acatctgcagctacaacaggcttcagtttaggattcaataaacctgcagcatctgccaca
ccatttgctctacctattacctctacctcagctagcggtctgactctttcgtctgctctg
acatcaactccagcagcatccacaggatttactctaaataatttgggtgggacaacagcc
acaactacaactgcatcaacaggcctctctttagggggagccttagctggtttgggaggt
tcacttttccagagtacaaacacaggaacatcaggacttggacagaatgctttagggttg
actttgggaactacagcagctacttcaactgcaggcaatgaaggccttggtggtatagat
ttcagtagctcctcagataaaaagagtgataaaacgggaacaagaccagaggatagtaaa
gctctgaaggatgaaaatctacctcctgtcatctgccaggatgttgaaaatctccagaaa
tttgtgaaggagcagaaacaagttcaagaagaaattagtagaatgtcttcaaaagcaatg
cttaaggtacaagaagatattaaagctctgaagcagctcctgtcgttggctgccaatgga
atacagagaaacactctcaacattgacaaattgaaaatagaaactgctcaggagttgaag
aatgctgaaatagctttaagaacccagaagacaccacctggacttcaacatgaatatgca
gctcctgctgactacttcagaatcttggttcagcaatttgaggtacagcttcagcagtac
aggcagcagattgaagaactagaaaaccatcttgccactcaagcaaataattcacatata
acccctcaagatttgtcaatggctatgcagaaaatttatcaaacatttgtagctttagcg
gcacaacttcagtctattcatgaaaatgtaaaggttctgaaagaacagtaccttggctac
aggaaaatgttcttgggagatgctgttgatgtgtttgaaacaaggcgagcagaagccaag
aagtggcagaacacacccagagttactactggacccactcctttcagcaccatgccaaac
gcagcagccgttgccatggctgcaacacttacacagcagcaacagcctgctacagggcca
cagccatctctgggagttagttttggaacgccattcggctcaggtattggcactggcttg
caatcaagtggcttaggttcttcaaaccttggaggatttggaactagctctggttttgga
tgcagcaccacaggggcctccacatttggatttggaacaacaaataaaccctcaggaagt
cttagtgcaggctttggcagctcaagtacatctgggtttaacttcagcaatcctggcatc
acggcatcagctggtttgacttttggggtgtccaatcctgcctctgcaggttttggaaca
ggaggacaactccttcagttgaagaaacctccagctggaaacaaaagaggaaaaagataa

KEGG   Homo sapiens (human): 53371
Entry
53371             CDS       T01001                                 
Symbol
NUP54, DYT37
Name
(RefSeq) nucleoporin 54
  KO
K14308  nuclear pore complex protein Nup54
Organism
hsa  Homo sapiens (human)
Pathway
hsa03013  Nucleocytoplasmic transport
hsa05014  Amyotrophic lateral sclerosis
Network
nt06464  Amyotrophic lateral sclerosis
  Element
N01152  Nuclear export of mRNA
N01153  Mutation-caused aberrant GLE1 to nuclear export of mRNA
Disease
H00831  Primary dystonia
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    53371 (NUP54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    53371 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    53371 (NUP54)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     53371 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 53371
NCBI-ProteinID: NP_059122
OMIM: 607607
HGNC: 17359
Ensembl: ENSG00000138750
Pharos: Q7Z3B4(Tdark)
UniProt: Q7Z3B4
Structure
LinkDB
Position
4:complement(76114664..76148397)
AA seq 507 aa
MAFNFGAPSGTSGTAAATAAPAGGFGGFGTTSTTAGSAFSFSAPTNTGTTGLFGGTQNKG
FGFGTGFGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQTTLGGLFSQPTQAPTQSNQLINT
ASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSC
MPSNKDEDGLVVLVFNKKETEIRSQQQQLVESLHKVLGGNQTLTVNVEGTKTLPDDQTEV
VIYVVERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQNP
PAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISE
LQKNQTTSVAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQGE
LNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHLKQQQEGLSHLISI
IKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq 1524 nt   +upstreamnt  +downstreamnt
atggccttcaattttggggctccctcgggcacctccggtaccgctgcagccaccgcggcc
cccgcgggtgggtttggaggatttgggacaacatctacaactgcaggttctgcattcagc
ttttctgccccaactaacacaggcactactggactctttggtggtactcagaacaaaggt
tttggatttggtactggttttggcacaacaacgggaactagtactggtttaggtactggt
ttgggaactggactgggatttggaggatttaatacacagcagcagcagcaaactacatta
ggtggtctcttcagtcagcctacacaagctcctacccagtccaaccagctgataaatact
gcgagtgctctttctgctccaacgctgttgggagatgagagagatgctattttggcaaaa
tggaatcaactgcaggccttttggggaacaggaaaagggtatttcaacaataatattccg
ccagtggaattcacacaagaaaatcccttttgccgatttaaggcagtaggttatagttgc
atgcccagtaataaagatgaagatgggctagtggttttagttttcaacaaaaaagaaaca
gagattcgaagccaacaacaacagttggtagaatcattgcataaagttttgggaggaaac
cagacccttactgtaaatgtagagggcactaaaacattgccagatgatcagacagaagtt
gttatttatgttgttgagcgttcgccaaatggtacttcaagaagagttccagctacaacg
ctatatgcccattttgaacaagccaatataaaaacacaattgcagcaacttggtgtaacc
ctttctatgactagaacagaactttctcctgcacagatcaaacagcttttacagaatcct
cctgctggtgttgatcctattatctgggaacaggccaaggtagataaccctgattctgaa
aagttaattcctgtaccaatggtgggttttaaggaacttctccgaagactgaaggttcaa
gatcagatgactaagcagcatcaaaccagattagatatcatatctgaagatattagtgag
ctacaaaagaatcaaactacatctgtagccaaaattgcacaatacaagaggaaactcatg
gatctttcccatagaactttacaggtcctaatcaaacaggaaattcaaaggaagagtggt
tatgccattcaggctgatgaagagcagttgcgagttcagctggatacgattcagggtgaa
ctaaatgcacctactcagttcaagggccgactaaatgaattgatgtctcaaatcaggatg
cagaatcattttggagcagtcagatctgaagaaaggtattacatagatgcagatctgtta
cgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccatttgattagcatc
attaaagacgatctagaagatataaagctggtcgaacatggattgaatgaaaccatccac
atcagaggtggtgtctttagttga

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