Hymenobacter sublimis: MWH26_04510
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Entry
MWH26_04510 CDS
T09379
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hsb
Hymenobacter sublimis
Pathway
hsb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MWH26_04510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsb03019
]
MWH26_04510
03400 DNA repair and recombination proteins [BR:
hsb03400
]
MWH26_04510
Enzymes [BR:
hsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MWH26_04510
Messenger RNA biogenesis [BR:
hsb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MWH26_04510
DNA repair and recombination proteins [BR:
hsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MWH26_04510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Ligase_CoA_2
Motif
Other DBs
NCBI-ProteinID:
UPL50174
UniProt:
A0ABY4JFN6
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All DBs
Position
1044875..1046794
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AA seq
639 aa
AA seq
DB search
MLPPTDDILHVLRHTWGHTQFRPMQEDIIRAVLAGQDTLALLPTGGGKSICFQVPALARP
GLCLVVSPLIALMKDQVENLRKRGIKAEAVYAGMSHQEIDQTLDNCVYGPVKFLYVSPER
LLTDMFRARVPKMKINLLAVDEAHCLSQWGYDFRPPYLRIQELRELLPGVPCIALTATAT
EQVRQDIVEKLAFGATHQVFQQSFARPNLSYSVLSTEDKFKRLVEVVRGVGAQKTSIVYA
RTRRQTEEAATYLRQQGLAAAPYHAGLPSEQRTRTQQDWMQNKTRCIVATNAFGMGIDKP
DVRLVVHLEAPDNLEAYYQEAGRAGRDEKYAFAVLLQGPNDGEELRRRTQQAYPPLDTVR
RVYQALANFSRTAVGGGELVAFDFDLQQFAETYRIKALDAHNSLRILEREGFVQLNEAVN
NPARVHIPINHTDLYHFQVANQQHDQLIKSLLRFNGGELFAGFQRISENSLAQYLRLSVV
DVRKMLLFLHRSGIIHYQPKHESPQALFTTARYDADKLPLDQKRLNEARELARHKTESVI
RYAAGGRCRQQLLLEYFGELDAPACKVCDFCLAKKKARQETPAAPELRGHLVALLKATPQ
TPREVLTHFAPGQATTVTSLLRELVELGELTYAPDGRLT
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcctcctaccgacgatattctgcacgtactgcgccacacctgggggcatacgcag
tttcggcccatgcaggaagacatcatccgagcggtgctggcgggacaggatacgctggcg
ttgctgcccacgggtgggggcaaaagcatctgctttcaggtgccggccctggcccgaccg
gggctctgcctggtggtgtcgccactgattgccctcatgaaggaccaggtggaaaaccta
cgcaaacgcggcatcaaggccgaggccgtgtacgcgggtatgagccaccaggaaatcgac
cagaccctggacaattgcgtgtacgggccagtgaaattcctgtacgtctcgccggagcgg
ctgctaaccgatatgttccgggccagggttccgaaaatgaagattaacctgctggcggtg
gatgaggcgcattgcctttcccagtggggctacgattttcgcccgccctacctgcgtatt
caggaattgcgggaactgctgccgggggtgccctgcatagccctcacggccaccgccacc
gagcaggtgcgccaggatattgtggagaagctggcattcggggccacgcaccaggtgttt
cagcagagctttgcccggcctaatctgtcgtactccgtgctgagcaccgaggataagttt
aagcgcctagtggaggtagtgcgcggggtaggcgcccagaaaaccagcattgtgtatgcc
cgcacccgccgccaaacggaggaggccgctacctacctgcggcagcagggactggccgcc
gcgccctaccacgccgggctgcccagcgagcagcgcacccgcacccagcaagactggatg
cagaacaaaacgcgctgcattgtggccactaatgcctttggcatgggcatcgacaagccc
gatgtgcgcttggtggtgcacctggaggcgcccgataatctggaggcttactaccaggaa
gccggccgggccggtcgcgacgagaaatacgcctttgccgtgctgctgcaagggcccaac
gacggcgaggagttgcgccgccgcacccagcaggcctacccccccttggatactgtgcgg
cgggtgtaccaggccctggccaacttttctcgcacggctgtgggcgggggcgagttggtg
gccttcgacttcgatctgcagcagttcgccgaaacctaccgcattaaagccctggatgcg
cacaatagcctgcgcattctggagcgggaaggatttgtgcagctaaatgaggccgtaaac
aacccggcccgtgttcatatccccatcaaccacaccgacctctaccactttcaggtagcc
aaccagcagcacgaccagctcattaagagcctgctgcgctttaacgggggcgagctgttt
gccggctttcagcggatttcggagaatagcctggctcaatacctgcgcctgagcgtggtg
gatgtgcgcaagatgttgctatttctgcaccgttcgggcattatccactaccagcccaag
cacgagtcgccgcaggccctgtttactaccgcccgctatgatgccgataaacttccactg
gatcaaaaacggctgaacgaagcccgggagctggcccgccataaaaccgagtccgtcatt
cggtacgccgcgggggggcgctgccgccagcaactgctgctggaatactttggggagctg
gacgccccggcctgcaaggtctgcgacttctgcctggcgaagaaaaaggcccggcaggaa
acaccagcggccccggaactgcgcgggcacctggtggcgctgctcaaggctaccccccaa
acgccccgggaagttctgacgcacttcgccccaggccaggccactaccgtcacgagtttg
ctgcgggaactggtggagctaggggaattgacgtatgcccccgacggccggctaacctaa
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