Acetivibrio saccincola: HVS_06395
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Entry
HVS_06395 CDS
T05223
Symbol
sigK
Name
(GenBank) RNA polymerase sigma-28 factor precursor
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
hsc
Acetivibrio saccincola
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsc03021
]
HVS_06395 (sigK)
Transcription machinery [BR:
hsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HVS_06395 (sigK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_3
HTH_23
HTH_31
HTH_24
HTH_19
MarR_2
KORA
HTH_28
HTH_Crp_2
HTH_37
Phage_CII
Trp_repressor
HTH_29
HTH_38
HTH_25
MarR
HTH_10
HTH_17
Sigma70_r4_2
HNF-1_N
FAM76
Motif
Other DBs
NCBI-ProteinID:
AUG57205
UniProt:
A0A2K9EDB8
LinkDB
All DBs
Position
complement(1420535..1421242)
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AA seq
235 aa
AA seq
DB search
MFNILFIPFIECLKNIFFVFGYISNTSSFPQPLKPEEEQYYIKKLSEGDEEARNVLIERN
LRLVAHIVKKYTSTISDSDDLISIGTIGLIKAIATFNYDKGTRLATYAARCIENEILMQI
RSNKKIQSEVSLQDPIGMDRDGNEISLIDVLGNDSESVVEEVELKMQVRRLYKKMKDVLK
HREKMVLELRYGLLNGTSKTQREIAKMLGISRSYVSRIEKKAIKKLSKELKSEGC
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaatattctgtttattccatttattgaatgccttaaaaacatcttttttgtattt
ggttatatatccaataccagctcttttccacaacctcttaaacccgaagaggagcagtat
tatataaaaaaattgtcagaaggcgatgaggaagccaggaatgttttaattgaaagaaac
ttacgtcttgttgcacatattgtaaaaaaatacacctccaccataagcgactctgatgac
ttaatttcaataggaacaataggtcttataaaggccattgctacctttaactatgacaaa
ggcacaaggcttgcaacttatgctgcacggtgtatagaaaatgaaatacttatgcaaata
aggtcaaataaaaaaatccaaagcgaagtatccctccaagaccccataggtatggacaga
gacggcaatgaaatttctttaattgatgttttaggcaatgactctgaatctgttgtagaa
gaagtggagttaaagatgcaggtcaggcgcctttataagaaaatgaaggatgttttaaag
catagagaaaaaatggtgttagaattaagatacggccttttaaacggcaccagcaaaacc
cagagggaaattgctaaaatgcttggaatatcaaggtcgtatgtatcaaggatagaaaaa
aaagctataaaaaaacttagcaaagaattaaaatcagagggctgttaa
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