Herbinix luporum: SD1D_0825
Help
Entry
SD1D_0825 CDS
T04072
Symbol
sigG
Name
(GenBank) RNA polymerase sigma-G factor
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
hsd
Herbinix luporum
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsd03021
]
SD1D_0825 (sigG)
Transcription machinery [BR:
hsd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SD1D_0825 (sigG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
HTH_28
HTH_10
HTH_3
HTH_23
KORA
Trp_repressor
HTH_31
HTH_37
GerE
HTH_26
MOZ_SAS
Phage_antitermQ
ParM_N
Motif
Other DBs
NCBI-ProteinID:
CUH92373
UniProt:
A0A0K8J4V9
LinkDB
All DBs
Position
I:894426..895205
Genome browser
AA seq
259 aa
AA seq
DB search
MALYKVEICGVNTSKLPLLKNSEKEELFQRILKGDKEARELYIRGNLRLVLSIIQRFSNS
NENVDDLFQIGCIGLMKAIDNFDITQNVKFSTYAVPMIIGEIRRYLRDNNAIRVSRSLRD
TAYKAIYAKEALTKKNDKEPTISEIAQEIGISKEDIVYALDAIQSPVSLYDPVYVEGGDA
LYIMDQVSDKKNKEENWIEAISLKEAMSKLPPREYNIIKLRFFEGKTQMEVAKEINISQA
QVSRLEKSALKNMRNYLTG
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggctctttataaggtagaaatatgtggcgtaaatacatcgaagttgccattactaaaa
aacagtgaaaaagaggaattatttcaaagaattttaaagggcgacaaggaggcgagggag
ctctatattaggggaaatttacgtcttgtactatccattatccagcggttctccaatagt
aatgaaaatgtggatgacttatttcagattggctgcatcggactgatgaaggccatagat
aattttgatattacacagaatgttaaattttctacctatgctgttcccatgataatcggt
gaaattcgccggtaccttagagataataatgctatacgtgtaagcagatcattacgggat
acggcttataaggcaatatacgccaaggaagccttaactaagaagaatgataaggaaccc
actatcagcgagatagcccaggaaattggcattagcaaagaagatatagtatatgccctt
gatgcaattcaaagtcctgtatctttgtatgatcctgtttatgttgagggaggagatgcc
ctatatattatggaccaggtcagtgataaaaagaacaaagaggaaaattggattgaggct
atatcactaaaggaggcaatgagcaaacttcccccaagggagtacaatataattaaatta
cgattttttgaaggtaaaactcagatggaggtagcaaaagaaattaatatttctcaagca
caagtaagccgtttggagaaatctgcactgaaaaatatgagaaattatttaaccggataa
DBGET
integrated database retrieval system