Herbinix luporum: SD1D_1051
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Entry
SD1D_1051 CDS
T04072
Symbol
alaS1
Name
(GenBank) Alanine-tRNA ligase 1
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
hsd
Herbinix luporum
Pathway
hsd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SD1D_1051 (alaS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hsd01007
]
SD1D_1051 (alaS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsd03016
]
SD1D_1051 (alaS1)
Enzymes [BR:
hsd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
SD1D_1051 (alaS1)
Amino acid related enzymes [BR:
hsd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SD1D_1051 (alaS1)
Transfer RNA biogenesis [BR:
hsd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SD1D_1051 (alaS1)
Prokaryotic type
SD1D_1051 (alaS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
TSC22
ZapB
Herpes_BLRF2
YabA
Motif
Other DBs
NCBI-ProteinID:
CUH92597
UniProt:
A0A0K8J549
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All DBs
Position
I:1135992..1138634
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AA seq
880 aa
AA seq
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MQTYGVNDLRKMFLDFFESKDHLVLKSFPLIPQNDNSLLLINAGMAPLKPYFTGQEEPPR
KRIATCQKCIRTGDIENVGKTSRHATFFEMLGNFSFGDYFKREAIAWSWEFLTQVIGLDK
NRLYPSVYEKDDEAFEIWNKEIGIAKDRIYRMGKEDNFWEIGSGPCGPCSEIYYDRGEKY
GCGKPDCEVGCECDRFIEVWNNVFTQFNGDGKGNYTELENKNIDTGMGLERLAVIVQDVG
SIFDIDTFKAIRDKICDIAGVTYLSDPNKDISIRLISDHIRAVTFMASDGIIPSNEGRGY
VFRRLLRRAARHGRLLGIKDKFLADLSITVVNEFKAGYPELEEKKDYIIKLLSIEEDKFN
KTIDQGLSILQEMQNNLEKKNLKILPGEDVFKLYDTYGFPFDLTKEILEEKGYQVDEEGF
KKSMEIQRETARSARTTTNYMGSEETVYQHLDHNLTSKFVGYDSLVHESKIIALTTETEL
ASDLVAGQKGTIVVEETPFYAVSGGQIGDTGVIVTDSAEFAVEDTIKLPGDKIGHVGRVI
KGIFKIDDRVSLKVDENLRAATAKNHSATHLLHKALRMVLGSHVEQAGSYVSNDRLRFDF
THFSAMTDDEITRVENIVNQQILMNLPVNTQLMNIDDAKKEGAMALFGEKYSDKVRVVSM
GDFSKELCGGTHVANTGHITVFKIISETGIAAGVRRIEALTGNGVINHYKDLETKLYEAA
KVAKTEPSSLIHRIESLLEEIKVLKSENEKLKSKLASNTLGDVMNEVQDVSGVKLLAVNV
PELDMNGLRNLGDKLKDKLGEGVIILASSTAPDKVSLVAMVSQEAINRGAHAGNLIKELA
VLVGGGGGGRPNMAQAGGKNAAGIADVIAKAKDVLSKQLK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacttatggtgtaaatgatttgaggaaaatgtttttggatttctttgaaagcaag
gatcatcttgtacttaaaagttttcctttaatacctcaaaatgacaatagcctgctttta
attaatgcaggaatggctcctttaaagccatattttacaggacaggaggaacctccaaga
aaaagaatagctacatgtcaaaaatgtattagaaccggtgatattgaaaatgtaggaaag
acatcccgtcatgctacattttttgagatgcttggtaatttctcctttggagattatttt
aaacgggaggctattgcctggtcatgggaatttttaacccaggtaataggccttgataaa
aatcgcctttatccttccgtatatgaaaaagatgatgaggcctttgaaatttggaataag
gaaatcggcatagcaaaagaccgtatctatcgtatgggcaaagaagataacttttgggaa
atcggttccggaccatgcggcccttgttctgaaatatattacgaccggggcgaaaaatat
ggctgcggtaagcctgactgtgaagtaggctgtgaatgcgataggtttattgaggtttgg
aataatgtatttacccagtttaacggagacggtaaaggcaattatactgaactggaaaat
aaaaatattgatacaggtatgggactagaaagacttgctgttattgtgcaagacgtaggg
tctatttttgatatagacacctttaaggcaataagagataaaatatgtgacattgcaggg
gtaacatatcttagtgatcctaataaagatatttctatccgcttgataagtgaccatatt
cgggcagttacttttatggcttccgacggaattattccttccaatgaaggaagaggttat
gtgttccgcagactccttcgccgtgctgcaagacatggacgtttacttggaattaaggat
aaatttttagcagacttatcaataacagttgtaaacgagtttaaagccggttatccggaa
ctggaagaaaagaaagattatattataaagcttctttctattgaagaagataaatttaat
aaaaccattgaccaaggattatctattcttcaagaaatgcaaaacaacttagaaaagaag
aatttaaaaatcctgccgggagaagatgtatttaaattatatgatacctatggctttcct
tttgatttaactaaggaaatattagaagaaaagggctatcaggtagatgaagaaggcttc
aaaaaatccatggaaattcaaagggaaactgccagaagcgcaagaactaccacaaattat
atgggttctgaagaaactgtataccagcatctagatcataatcttacttcaaaattcgta
ggatatgatagcttagttcatgaatcaaaaattatagccttaactaccgagactgagctg
gcttctgatttggtggccggacaaaaaggtactattgtagtggaagagactcccttttat
gcagtcagtggtggtcaaattggtgataccggtgtaatagttactgattctgctgaattt
gcagtagaagataccattaaacttcccggagataagatcggacatgtcggtagagtaatc
aagggaatatttaagattgacgatagggttagtctaaaggttgatgaaaatcttagggcg
gcaacggctaaaaaccattccgcaacccatttacttcataaggcccttcgtatggtattg
ggtagtcatgtggaacaagccggttcatatgtttcaaatgatagattaagatttgacttt
actcatttttcggccatgaccgatgatgaaattactagggtagaaaatattgttaaccag
caaatattaatgaatcttcctgtaaatacccagctgatgaatatagacgatgctaagaaa
gagggagccatggcacttttcggtgaaaaatattccgataaagttcgtgttgtttccatg
ggagatttcagtaaagaattatgtgggggaacccatgtggcaaataccggccatataact
gtatttaagataatatcagaaacaggtattgcagccggtgtaagaagaatagaagccttg
accggaaacggtgtaattaatcattataaggatttagaaactaagttatatgaagcagca
aaagttgctaaaacagaacccagcagccttattcatagaatagaaagtttactggaagaa
attaaagttctaaaatctgaaaatgaaaaacttaaatccaaactggccagcaacacactt
ggggatgttatgaatgaggttcaggatgtatcgggagtaaaattactggctgttaatgta
cctgaacttgatatgaacggtctaagaaacttaggagataagttaaaagataaattaggt
gaaggtgtaattattcttgcttcttctacggcgccagataaagtaagcttagttgccatg
gtaagccaggaagccataaataggggtgcccatgccggtaatctaattaaagagctggct
gtattagtaggcggtggcggtggcggaagaccaaatatggcacaggccggaggaaaaaat
gcagccggtatagctgatgttattgccaaagcaaaagatgttttaagcaaacaattaaaa
taa
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