Herbinix luporum: SD1D_2344
Help
Entry
SD1D_2344 CDS
T04072
Symbol
clpB
Name
(GenBank) Chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
hsd
Herbinix luporum
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hsd03110
]
SD1D_2344 (clpB)
Chaperones and folding catalysts [BR:
hsd03110
]
Heat shock proteins
HSP100
SD1D_2344 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
DUF815
ATPase_2
nSTAND3
AAA_14
AAA_7
IstB_IS21
AAA_18
Zeta_toxin
NACHT
Mg_chelatase
Roc
RNA_helicase
NBD_SMAX1
RuvB_N
VapE-like_dom
AAA_24
bpMoxR
ABC_tran
T2SSE
ResIII
AAA_19
DNA_pol3_delta2
DUF87
AAA_23
Motif
Other DBs
NCBI-ProteinID:
CUH93856
UniProt:
A0A0K8J895
LinkDB
All DBs
Position
I:complement(2523788..2526370)
Genome browser
AA seq
860 aa
AA seq
DB search
MNINKFTQNSILAVQNCEKLAYEYGHQEIDIEHLLYSLISLDDSLIEKLLEKMGINTKVF
IAQVKGLLDKRAKVSGGQLYISSDLNKVLIYAEDEAKHMGDLYVSVEHLFLSMLKQSGGK
VKELFTDFNITRESFLAALRSVRGNQKVVSDNPEATYDTLEKYGYDLVTRAKEQKLDPII
GRDAQIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPHSLKDKKIFALD
MGALVAGAKYRGEFEERLKAVLEEVKKSQGQIILFIDELHTIVGAGKTDGALDAGNMLKP
MLARGELHCIGATTLNEYRQYIEKDAALERRFQPVLVDEPTVEETISILRGLKEGYEVFH
GVKITDGALVSAATLSDRYISDRFLPDKAIDLVDEACALIKTELDSMPTKLDDMQRRIMQ
MEIEEAALKKENDRLSMERLEELRKELVELKETFTLEKAKWDNEKAAIKKVQKLREEMEE
VNKQIELAQRDYDLNKAAELKYGRLPQLNKQLQIEEEKLKSKESQMVRERVSEEDIARIV
SRWTGIPVTKLTESEKNKTLNLPDYLHKGVIGQEEAVLKVSDAILRSKAGIKDPNKPIGS
FLFLGPTGVGKTKLAKALAESLFDNEQNMIRIDMSEYMEKHSVARLIGAPPGYVGYDEGG
QLTEAVRRRPYAVILFDEVEKAHKDVFYVLLQVLDDGRITDSQGRTIDFKNTIIILTSNI
GSRYLLEGVSESGEISSECEAMVMDELRASFRPEFINRLDEIIMFKPLTKENISDIINLM
IADVNKRLKERDITIQVTQGAKDYIVQRAYDPVYGARPLKRYLQKNVETLSARLILSDQA
SSGDTIIIDQGEDGLTARVM
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaataagtttacacaaaattcaattctggcggtacaaaattgtgaaaaatta
gcttatgaatatgggcatcaggaaatagatatagaacatttgctttatagtcttatttcc
ttggatgatagtcttatagaaaagttattggagaagatggggataaacaccaaggttttt
atagcccaggttaagggtcttttagataaaagggcaaaggtatccgggggacaactatat
attagcagtgacttaaataaggtcttaatctatgccgaggatgaggcaaagcatatggga
gatttatatgtatcggtagagcatctatttcttagtatgctaaagcagtccggagggaaa
gttaaggaattgtttactgactttaacattacaagggaatccttccttgcagccttaaga
agtgtaagaggaaatcaaaaggtggtcagtgataatcctgaggctacctatgacaccctt
gaaaaatacggatacgatttggttacccgggccaaggaacaaaagttagatcccattatc
ggtagggatgcccagattcgtaatgtcatccggatattatctagaaaaactaagaacaat
cccgttcttatcggagagccgggagtaggcaaaacagcagttgtagaagggcttgcacaa
agaattgtaaaaggggacgtaccccattccttaaaagataagaaaatatttgcattagat
atgggagctttagttgccggagccaagtataggggggaatttgaagagaggctaaaggca
gtactagaggaagtaaaaaagagccaaggacagattatattatttatagatgagcttcat
accattgtaggagcaggaaaaaccgatggagccttagatgcaggtaatatgcttaaacct
atgctagccaggggagaacttcattgtatcggagcaactacccttaacgaataccgtcaa
tatattgaaaaggatgcagccttggaaagaaggtttcaaccggttttagttgatgaacct
actgtggaagagaccatatctattcttaggggattaaaggaaggttatgaggtctttcat
ggagttaaaattaccgacggggctttggtcagcgcagccaccttgtctgacagatatata
tcagaccgcttccttcccgataaggctattgaccttgtagatgaagcctgtgccctgatt
aagacagaactagattccatgcctacaaagcttgatgatatgcagcgaagaattatgcaa
atggaaattgaagaagcggcccttaagaaggaaaatgaccgtttaagtatggagcggctt
gaagaacttagaaaggaactggtagaacttaaagagacatttacccttgaaaaggctaaa
tgggataatgagaaagcagctattaagaaagttcaaaaacttcgggaagaaatggaagaa
gttaataaacaaatcgaactggcccagcgtgactatgatctaaataaagcagcagaatta
aagtatggacgacttccccagttaaataagcaacttcaaatagaagaagaaaaattaaaa
agtaaggaaagtcaaatggttcgtgaaagggtaagtgaagaggatattgccaggatagta
tctagatggaccggtattcctgtaacaaagcttacagaaagtgagaaaaataaaactctt
aatttaccggattatcttcacaaaggggtcataggacaagaggaagcagttttgaaagta
tcagatgccatacttcgttccaaagcaggaataaaagaccccaataaacctattggctca
tttttattcttaggccctaccggagtaggtaaaacgaaactggccaaggctttggctgaa
agtctgtttgacaatgaacagaacatgataagaatagatatgagtgaatatatggaaaag
cattctgttgccagactaataggagcacctccgggatatgtaggctatgatgaagggggc
caacttaccgaagcagttaggagaagaccttatgcagttattttatttgatgaggtagaa
aaagctcataaggatgtattttatgtgctacttcaagttttagatgacggtagaattaca
gattctcagggtagaacaattgattttaaaaatacaattattattcttacctctaatatc
ggttcaagatatttattagagggggtcagtgaaagtggagaaatcagttcagaatgtgaa
gccatggtaatggatgagttgagagcctcatttaggcctgaatttataaatcggctggat
gaaattattatgtttaagccccttactaaggagaatatcagtgatattattaatttaatg
atagcagatgtaaataagagactaaaagagagggatattactatccaagtaacccagggg
gccaaagattacattgttcaaagagcatatgatcctgtctatggtgcaagacccttaaag
aggtacctgcaaaagaatgtagaaaccttaagtgcaaggctaattttaagtgaccaggct
tctagtggagatactataataatagatcaaggagaagatggccttactgctagggttatg
taa
DBGET
integrated database retrieval system
