Herbaspirillum seropedicae SmR1: Hsero_1536
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Entry
Hsero_1536 CDS
T01268
Name
(GenBank) outer membrane lipoprotein
KO
K07278
translocation and assembly module TamA
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_1536
Transporters [BR:
hse02000
]
Other transporters
Pores ion channels [TC:
1
]
Hsero_1536
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_TamA_1
Motif
Other DBs
NCBI-ProteinID:
ADJ63051
UniProt:
D8IQ05
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Position
complement(1770596..1772362)
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AA seq
588 aa
AA seq
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MKWTRSLAITLLWCAAEPAIAAYQVDIEAPKPVQSLLKDFLDLSRYQDRDDISDEQLKFM
MDTAGEQVRDLTATEGYFTPVTKVSEESAAGKDGVRRITVTVDPGPRTLVESAEISVTGS
AASQDAARVAQLRTDWSLSPGEPFRQQDWDKAKNAGLATLQQKKYAAARIADSEARIAPQ
AQQADLSVRYDSGPAFTLGALQITGTRRYPESIIRNVSPLIVGEPYDVDRLLALQRQIQN
TPYFSNAIVAIDDDPAHPDQTPVKVQVTEFPTQRIRTGVGYGTDTGAQAEGRYSHYNVFN
RAYVFDSQLRLEQKRQYGLLSLAMPPDSKAFVNSINTAYDRTTLEGIDLRTQQVGLKRAR
NSDNYDTTYSLTYYRDELVQENGVTLPANTIVTPGKHRALVPGFAWSRRNVDNPIFPRHG
NLLTLEAGLALKGVLTDQSFSRLYGRFKQFVPVGKRDIVVLRAELGGVFTAGRAGSVPAS
LLFRTGGNDSVRGYSYQSIGNEQNGTVYPTKYLAVGSTEYQRWFSENWGAAVFYDMGAAA
DNWSNKTFYHGVGTGARWRSPVGTLNLDLAYGIQKRQIRPHISLGIAF
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggacccgcagcctggccatcaccctcctctggtgcgccgcagaacccgctatt
gccgcctaccaggtggatatcgaagcgcccaagccggtgcagtcgctgctcaaggacttc
cttgacttgtcccgctaccaggaccgcgacgacatcagcgacgagcaactgaagttcatg
atggacaccgccggcgagcaggtgcgcgacctgaccgccaccgaaggctatttcacgccc
gtgaccaaggtcagcgaagagagcgccgccggcaaggacggcgtgcggcgcatcacggtc
accgtcgatcccggcccgcgcaccctggtcgaatcggccgagatcagcgtcaccggcagc
gccgccagccaggatgcggcgcgcgtggcgcagttgcgcaccgactggtcgctcagcccc
ggcgaacccttccgccagcaggactgggacaaggccaagaatgccggcctggcaacgctg
caacagaagaaatacgccgccgcccgcatcgccgactccgaagcccgcatcgccccgcag
gcgcagcaggccgatctgagcgtgcgctatgacagcggtccggcctttaccctgggtgcg
ctgcagatcaccggcaccaggcgctaccccgaatcgatcatccgcaacgtcagtccactg
atcgtaggcgagccctatgatgtggaccggctcctggcgctgcaacggcagatccagaac
acgccctacttctccaacgccatcgttgccatcgacgacgaccccgcccatcccgaccag
accccggtgaaggtgcaggtcaccgagttccccacccagcgcatccgcaccggcgtgggc
tatggcaccgataccggggcccaggccgaagggcgctattcgcattacaacgtgttcaac
cgcgcctatgtcttcgacagccagctgcggctggagcagaagcgccagtacggcctgctg
tcgctggccatgccgccggacagcaaggccttcgtcaacagcatcaataccgcgtacgac
cgcaccacgctggaaggcatcgacctgcgcacccagcaggtcggcctcaagcgcgcccgc
aacagcgataactacgacaccacctattcgctgacctattaccgcgatgagctggtgcag
gaaaacggcgtgaccctgccggccaacaccatcgtcaccccgggcaagcaccgcgcgctg
gtgccgggctttgcctggtcgcgccgcaatgtggacaatcccattttcccccgccacggc
aacctcctgacgctggaagccggcctggccctcaagggggtgctgaccgaccagagcttc
agccgcctgtatggacgcttcaagcagttcgtgccggtcggcaagcgcgatatcgtggtc
ttgcgcgccgagctgggcggcgtcttcacggcaggccgggccggctcggtgccggcctca
ctgctgttccgtaccggcggcaacgattcggtgcgcggctacagctaccagagcatcggc
aatgagcagaacggcaccgtctatcccaccaagtacctggccgtgggcagtaccgaatac
cagcgctggttcagcgagaactggggcgctgccgtgttctatgacatgggcgcggcggcg
gacaactggagcaacaagaccttctatcatggcgtgggcacgggcgcgcgctggcgcagt
ccggtcggcaccctcaacctggacctggcctatggcatccagaaacgccagatccgacct
cacatctcgctggggatcgctttctag
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