Herbaspirillum seropedicae SmR1: Hsero_3292
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Entry
Hsero_3292 CDS
T01268
Symbol
trpB
Name
(GenBank) tryptophan synthase (beta chain) protein
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00260
Glycine, serine and threonine metabolism
hse00400
Phenylalanine, tyrosine and tryptophan biosynthesis
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
hse01230
Biosynthesis of amino acids
Module
hse_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Hsero_3292 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
Hsero_3292 (trpB)
Enzymes [BR:
hse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
Hsero_3292 (trpB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
ComFB
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
ADJ64773
UniProt:
D8J1Z0
LinkDB
All DBs
Position
complement(3770564..3771823)
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AA seq
419 aa
AA seq
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MKELNPLGGFAERQAIPAAALHQTAHYNLPDSRGHFGPYGGSFVSETLTLALNELREAYA
RYQHDEQFLAEFHTELKHFVGRPSPVYHAKRWSEMAGGAQIYFKREDLNHTGAHKINNVI
GQALLAKRMGKKRIIAETGAGQHGVATATICARFGMECIVYMGSEDVKRQLQNVYRMNLL
GAKVVPVESGSKTLKDALNEAMRDWVTNVETTFYIIGTVAGPHPYPMMVRDFQSVIGNEC
IQQMPEIASRQPDYVVAAVGGGSNAMGIFYPYIDYPDVKLVGVEAAGDGLDTGRHSASLT
LGSPGVLHGNRTYLLQDANGQIIETHSVSAGLDYPGVGPEHAWLKDSGRASYACITDDEA
LEAFNTCCRIEGIIPALESSHALAHAAKLAATLPRDQIVLVNLSGRGDKDMHTVQQRQG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgaatcccctcggcggtttcgccgagcgtcaagccattcctgccgccgcc
ctgcaccagacggcccactacaacctgcccgattcccgcggccatttcggcccgtacggc
ggcagcttcgtgtccgaaacgctgaccctggccttgaacgagctgcgcgaggcctatgcg
cgttaccagcacgatgagcagttcctggccgaattccataccgaactgaagcatttcgtc
ggtcgtcccagcccggtgtaccacgccaagcgctggtccgagatggcgggtggcgcgcag
atctacttcaagcgcgaagacctgaaccacaccggcgcccacaagatcaacaacgtgatc
ggccaggcgctcttggccaagcgcatgggcaagaagcgcatcatcgccgagaccggcgcc
ggccagcacggcgtggccacggccaccatctgcgcgcgcttcggcatggaatgcatcgtc
tacatgggcagtgaagacgtgaagcgccaattgcagaacgtctaccgcatgaacctcttg
ggcgccaaggtggtgccggtggagtccggttccaagaccctgaaggatgcgctcaatgaa
gccatgcgcgactgggtcaccaatgtcgagaccaccttctacatcatcggcaccgtggcc
ggtccgcacccctatccgatgatggtgcgcgacttccagtcagtgatcggcaacgagtgc
atccagcagatgccggaaatcgcctcgcgccagcccgactacgtggtggcggcggtgggt
ggtggttccaacgccatgggcatcttctatccctacatcgactacccggacgtcaagctg
gtcggcgtggaagccgccggcgatggcctggacactggccgtcactcggcctcgctgacc
ctgggctcgcccggcgtgctgcacggcaaccgtacctacctgctgcaggacgccaacggc
cagatcatcgagacccactcggtctcggccggcctggactatccgggcgtgggcccggaa
cacgcctggctcaaggacagcggtcgcgccagctatgcctgcatcaccgatgacgaggcg
ctcgaagccttcaatacctgctgccgcatcgaaggcatcatccccgcgctggagtccagc
cacgcactggcccatgcggccaagctggcggccaccttgccgcgggaccagatcgtgctg
gtcaacctgtccggccggggggacaaggacatgcataccgtgcaacagcgccagggttga
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