Herbaspirillum seropedicae SmR1: Hsero_3942
Help
Entry
Hsero_3942 CDS
T01268
Symbol
gabT
Name
(GenBank) 4-aminobutyrate aminotransferase protein
KO
K00823
4-aminobutyrate aminotransferase [EC:
2.6.1.19
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00250
Alanine, aspartate and glutamate metabolism
hse00410
beta-Alanine metabolism
hse00640
Propanoate metabolism
hse00650
Butanoate metabolism
hse01100
Metabolic pathways
hse01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Hsero_3942 (gabT)
00650 Butanoate metabolism
Hsero_3942 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Hsero_3942 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Hsero_3942 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hse01007
]
Hsero_3942 (gabT)
Enzymes [BR:
hse01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
Hsero_3942 (gabT)
Amino acid related enzymes [BR:
hse01007
]
Aminotransferase (transaminase)
Class III
Hsero_3942 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Motif
Other DBs
NCBI-ProteinID:
ADJ65413
UniProt:
D8ISJ7
LinkDB
All DBs
Position
complement(4515790..4517160)
Genome browser
AA seq
456 aa
AA seq
DB search
MIEAELESLNFTDAPKMVTPTYPGPKTAAALELSARTESMARGGGRMPIAMDQAFGVTFK
DPDGNTFIDLSAGVGVSSVGRCNPRVVEAIRKQSESLMHSMEVNSSKRTELAAKISEIMP
DGLRGDCITFFTQGGSDALEAAVKFAKRVTGRHQIIAFHGGYHGIWNASNALTTGTAYRK
GFGPFMGGVIHAPYPYAYRFPFDTSHKSAEQIAGEYVDYLLNTPYTAADDVAAVIVEPVQ
GEGGYVPPSPEFLQILRKACDRSGALLIVDEVQAGAGRTGKMWAVEHSGVKPDMLTFGKG
IGGDMPMAGLVMRSDLAAKIPDGSQPNTFAANSISAAVALTNISILQDPRLDLVNRAHTL
GLEAQERIRSFNSPWVGEVRGRGLMIGIELVENRETREPLSREKLGKLMDYVVGHGVLMI
PCGRYTNVMRVMPSLTIPRSLMFKGLDIFGAGLASL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagcagaactggagtcgctcaacttcaccgacgctcccaagatggtaacgccc
acctaccccggtcccaagaccgcggcggcgctggaactgtcggcccgcaccgaatcgatg
gcgcgcggcggcggccgcatgcccatcgccatggaccaggccttcggcgtgaccttcaag
gacccggacggcaataccttcatcgacctttccgctggcgtgggcgtgagcagcgtgggg
cgctgcaatccgcgcgtggtcgaagccatccgcaagcagtccgaatcgctgatgcactcg
atggaagtcaacagctccaagcgcaccgagctggccgccaagatctctgagatcatgccc
gatggcctgcgcggtgattgcatcaccttcttcacccagggcggcagcgatgccctggaa
gccgccgtcaagttcgccaagcgcgtcaccggccgccaccagatcatcgccttccacggc
ggctaccacggcatctggaacgcctccaatgcgctcaccaccggcactgcctaccgcaag
ggcttcggtcccttcatgggcggcgtgatccacgccccgtatccctacgcctatcgtttc
cccttcgacaccagccacaagagcgccgagcagatcgccggcgagtacgtcgattacctg
ctcaacaccccctataccgcggccgatgacgtggccgccgtgatcgtcgagccggtgcag
ggcgagggtggttacgtgccgccgtcgccggagttcctgcagatcctgcgcaaagcctgc
gaccgcagcggcgcactgctgatcgtcgatgaagtgcaggctggcgctggccgcaccggc
aagatgtgggcggtggagcattccggcgtgaagcccgacatgctgaccttcggcaagggc
atcggcggcgacatgcccatggccggcctggtgatgcgctcggacctggctgccaagatc
cccgacggttcgcagcccaataccttcgccgccaattcaatctcggcggcggtggcgctg
accaacatcagcatcctgcaagacccgcgcctggacctggtcaaccgcgcccacaccctg
ggcctggaagcacaggaacgcatccgcagcttcaacagcccctgggtgggcgaggtgcgc
ggacgcggcctgatgatcggcatcgagctggtggagaaccgcgaaacccgcgaaccgctc
tcgcgcgagaagctgggcaagctgatggattacgtggtcggtcatggcgtgctgatgatt
ccttgcggccgctataccaacgtcatgcgcgtgatgccttcgctgaccattccgcgctcg
ctgatgttcaaggggctggacatcttcggtgcgggtctggcttcgctgtga
DBGET
integrated database retrieval system
