Helicobacter suis: NHP194022_15410
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Entry
NHP194022_15410 CDS
T07888
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hsh
Helicobacter suis
Brite
KEGG Orthology (KO) [BR:
hsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsh03016
]
NHP194022_15410 (gidA)
03036 Chromosome and associated proteins [BR:
hsh03036
]
NHP194022_15410 (gidA)
Transfer RNA biogenesis [BR:
hsh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NHP194022_15410 (gidA)
Prokaryotic type
NHP194022_15410 (gidA)
Chromosome and associated proteins [BR:
hsh03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
NHP194022_15410 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
HI0933_like
Pyr_redox
FAD_binding_2
AlaDh_PNT_C
Pyr_redox_3
TipAS
FlxA
Motif
Other DBs
NCBI-ProteinID:
BCD51870
LinkDB
All DBs
Position
1504285..1506159
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AA seq
624 aa
AA seq
DB search
MLDIVVVGGGHAGIEASIVAAKMGAKVHLLTLLIENIGLASCNPAIGGLGKGHLVKEIDA
LGGVMGILSDLSGLQFRILNASKGPAVRGTRAQIDMDLYRQNARNLVLNTSNLSVSQEMV
EGLLIENGAVVGVKSTLGKEYKASKVILTTGTFLQGLVHIGTHTSQNGRFGESASIELAK
HLKTLGLEIGRLKTGTCPRLAGNSIDFTELEAHFGDFPPPKFSHKTKDFNPIQLPCFITY
TNSKTHALIEQNFHLAPMFSGQIEGVGPRYCPSIEDKIYRFKDKERHQLFLEPQTKSGSE
YYVNGLSTSLPFHLQEQVIHSIKGLEHAHITRYGYAIEYDFIQPTGLEYSLESKQIKNLY
LAGQINGTTGYEEAAAQGLLAGINACLTLQNKPPLILRRDEAYIGVMIDDLVSKGTQEPY
RMFTSRAEYRLLLREDNARWRLCKYAYALGLMSEKEHAKLQKQQDQITKALENLKNTHFT
PSKETLQKLQDLGQEGINDKCNGVFLAGRDSCSVEILSSLFSFLQNLEPEVLEQVKIACK
YHSYIEKQSASIARMEQMLQNKIPSDFVFHKIPGLGLEAIEKLERFRPKSLFEASQISGI
TPSNLEVLQLYLHLHTKTTLKELP
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttagatattgttgttgtgggaggggggcatgcaggtattgaggcttctattgtggcg
gctaaaatgggcgctaaggtgcatctactcacgcttttaatagaaaatatcgggctagct
agctgtaacccggccattggtggacttggtaaggggcatttggttaaagaaattgatgcc
ttaggcggggtcatggggattttaagcgatttatctggtttgcaatttcgcatccttaat
gcctctaaaggaccagctgtacggggtacgcgcgctcaaattgatatggatctctaccgc
caaaatgcccgcaatttagtgttaaacacttctaatttaagcgtttctcaagaaatggtg
gagggtttactcatagaaaatggggctgtggtgggggttaaaagtactcttggtaaagaa
tataaagcctcaaaggttattctcactacaggaacttttttacaaggcctagtacacatc
gggacacatacaagccaaaacgggcgctttggtgagagcgcttctattgagctagccaag
catttaaaaactctaggtttagaaatagggcggcttaaaaccggcacctgcccgcgtttg
gctggaaatagcattgattttacagagctagaagcccactttggggattttcctccgcct
aaatttagccataaaacaaaggattttaaccccatacaattaccctgttttatcacctac
actaattctaaaacccacgcccttattgagcaaaatttccatttagcgcctatgtttagc
ggccaaatagagggggtggggccgcgttattgccctagcattgaggataaaatttatcgc
tttaaagataaagagcgccaccaactttttttagaaccccaaacaaaaagtggcagtgag
tattatgtcaacgggctaagtacttctctaccctttcatttacaagaacaagttattcac
tccattaaaggcttagagcacgcccacattacgcgctatggttatgccattgagtatgat
tttatccagcctacagggcttgaatactccctagagagtaaacagattaaaaatctctat
ttagcaggccaaatcaatggtacaactggctatgaagaggcagcagcacaaggattactt
gccggaattaatgcttgtttgactttacaaaataaaccccccttaattttgcggcgtgat
gaggcctacatcggtgtgatgattgatgatttagtcagtaagggcacacaagaaccttat
cgcatgtttacctctcgcgctgaataccgcctactactacgagaggataatgcaaggtgg
cgtctttgcaagtatgcttatgctttaggattaatgagtgagaaagagcatgccaaatta
caaaagcaacaagatcagatcacaaaagccctagaaaatcttaaaaacacacattttacg
ccctctaaagaaaccctacaaaaactccaagatttaggacaagaggggattaatgataaa
tgtaatggggtgtttttagccggacgcgatagctgtagtgtagagattttaagctctctt
tttagctttttacaaaatttagagccagaggttttagagcaagttaaaattgcctgtaaa
taccatagctacattgaaaaacaaagcgcctctattgcaagaatggagcagatgttacaa
aataaaatcccctcagattttgtcttccataaaatccccggtcttggcctagaggccata
gaaaagttagagagatttcgccctaaaagtctctttgaggcctcacagattagcggaatc
accccttctaacttagaagtgttgcaactctacctccacctacacactaaaaccactctt
aaagagctcccatga
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