Hydrocurvibacter sulfurireducens: WCY03_02595
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Entry
WCY03_02595 CDS
T11236
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
hsj Hydrocurvibacter sulfurireducens
Pathway
hsj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hsj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WCY03_02595 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsj03021
]
WCY03_02595 (rpoB)
03400 DNA repair and recombination proteins [BR:
hsj03400
]
WCY03_02595 (rpoB)
Enzymes [BR:
hsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WCY03_02595 (rpoB)
Transcription machinery [BR:
hsj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WCY03_02595 (rpoB)
DNA repair and recombination proteins [BR:
hsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WCY03_02595 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
XAU10449
LinkDB
All DBs
Position
487740..491885
Genome browser
AA seq
1381 aa
AA seq
DB search
MLNTLYSGNRLRVDFAKTPQQIEVPNLLQLQQSSYDNFLMLDANDRSKSGIENVFQSVFP
IHDAQNRLTVEYIGSEVGKPKYTVRECMERGLTYAVSLRMKTRLVIWERNENTKEKLGVK
DIKEQSIFVRDIPLMTERTSFIINGVERVVVNQLHRSPGVIFKEEEATTSGNKLIYTGQI
IPDRGSWLYFEYDPKDILYMRINKRRKVPVTIMFRALGYSKQDILKLFYPLQTITIKDNS
FTIKFNPDDFKGRLEFDLVDDKGNTLITTGKRLSAKKAQKFIEDGVTNIMYPLDVLVERY
LAEPIINPETGEVLFDTMTPIDETKLKKMAEAGVESFVIANDLAEGVDGSIINAFIADAD
SLKLLKQTEDIEDENDLSAIRIYKVMRPGEPVTKDAAKAFVNQLFFDPERYDLTRVGRMK
MNHKLGMSIPEYVTVLTNEDIINTVKYVIKVKNGQGHIDDRDHLGNRRIRSIGELLGNEL
HNGLIKMQKAIKDKLSTMSGPMNELMPHDLINSKMITSTIMEFFSGGQLSQFMDQTNPLS
ELTHKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPIETPEGQNIGLINTLATYSKVN
EHGFIEAPYKVVKEGIVTNEVVYLTATQEEGKMIAAASNKLDAKGQFIEDLIAVRQDGEI
IYRSPKDCEYADLSSHMVVGVAASLIPFLEHDDANRALMGSNMQRQAVPLLRPQAPMVGT
GVEKLVARDSWECIYAKRSGIVEKADAKHIYIKGEDEDGIFIDYYPLQKNLRTNQNTSFS
QKPIVKIGQFVEKGHIIADGPNMDQGELALGVNAMVAFMPWNGYNYEDAIVISERMIRED
AFTSVHIYEKECEARELKHGVEEITRDIPNVREEELAHLDESGIVKIGTNVKGGMILVGK
VSPKGEVKPTPEERLLRAIFGEKSGHVVNKSLYCPPSMEGVVVDIKIFTKKGYDKDPRSL
ELEKEERDYLEREHYDRLLMIDKEEIFRITALLTKEPLGKDITINGTDYKKGDIINGEDL
KDVNRFAMNNIVKSFSEDIQNQYNVMKNYFQKQKRIFRDEHEEKLAILENDDILPNGVVK
YVKVYIATKRHLKVGDKMAGRHGNKGIVSNIVPEVDMPYMEDGRSVDVCLNPLGVPSRMN
IGQVLEMHLGMVGRELGHQIQAEFDAKQAEFLDNIRAKMIEISDVSGLMNAAEVLAKMSN
DELLKYAQDWAKGVKFATPIFEGVDQAEFAKLFELAKMDSDGKTVLFDGKTGEKMHERVN
VGYMYILKLHHLVDEKIHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGASAV
LKEMLTIKSDDVDGRVRAYKALTKGELVPESGIPETLFVLTKELQSLALDVEIFDEVEDD
E
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacactttatattctggaaatcgtttacgtgtagactttgcaaaaactcctcag
caaatagaagttccaaatctactccaattacaacaaagttcttatgacaatttcttaatg
cttgatgcaaatgatcgttcaaaaagtggtattgaaaatgtatttcaatcggtatttcct
attcatgatgcgcaaaacagattgacagtcgagtatataggctctgaagtcggcaagcct
aaatataccgtccgcgaatgtatggagcgcgggctgacatacgctgtttcactgagaatg
aaaacacgtcttgtcatctgggaacgtaatgaaaacacgaaggaaaaactaggtgtcaaa
gatataaaagagcaaagtatctttgtccgtgatatccctttgatgacagaacgtacttca
tttattatcaacggcgtagagcgtgttgtcgttaatcagttacacagatctccgggtgtt
atttttaaagaagaagaagcaacgacttccggtaataaacttatttataccggtcagatc
attccggatcgcggttcttggttgtattttgagtatgatccaaaagatatcctttatatg
agaatcaacaaacgccgtaaagttcctgttacgatcatgttccgtgctttaggatattct
aaacaagatattttaaaactgttttatccgttacaaactattacgatcaaagacaacagt
ttcaccattaagttcaatcctgacgattttaaaggaagattggagttcgatctagttgat
gataaaggaaatacgcttatcacgacagggaaaagactttctgcgaaaaaagctcagaaa
ttcatagaagacggtgtgacaaacatcatgtatcctttggatgttttagtcgagcgttat
cttgctgaaccgatcattaaccctgaaaccggtgaagtcctatttgacacgatgactccg
atcgatgaaacaaaactgaaaaagatggccgaagcaggcgttgagtcgtttgtaatcgct
aatgatctcgccgaaggcgtggacggctctatcatcaatgcttttattgcagatgcagat
tcattaaaacttttaaaacaaacggaagatatcgaggatgaaaacgatctttcggctatc
cgtatctataaagtaatgcgtccaggcgagcctgtaacaaaagatgcagcaaaagcgttt
gtcaaccagcttttctttgatccggaaagatatgatttgactcgcgtcggtcgtatgaag
atgaatcacaagcttggtatgagcattcctgagtatgttacagtcttaacgaatgaagat
attatcaatactgttaaatacgttatcaaagttaaaaacggtcaaggtcacatagatgac
agagatcacttgggtaaccgtcgtatccgttctatcggtgaacttttaggaaacgagtta
cataacggtcttatcaagatgcaaaaagcgatcaaagacaagctttctactatgagcggt
cctatgaatgagcttatgcctcatgacctgatcaactctaagatgatcacttcgacgatc
atggagttcttctccggcggacagttgtctcaatttatggatcagacgaacccgttatcg
gaattgacgcataaacgtcgtctatcagcacttggagagggcggtcttgttaaagagaga
gcaggatttgaagtccgtgacgttcacccgactcattacggccgtatctgtccgatcgag
actcctgagggacaaaacatcggtcttatcaatactcttgcaacctattctaaggttaat
gagcatggatttatcgaagctccgtataaagttgtcaaagagggtatcgtaactaatgag
gtcgtataccttacggctactcaagaagagggcaagatgatcgctgctgcttcgaataaa
cttgatgcaaaaggacagtttatagaggatctgatcgctgtacgccaagacggtgagatc
atctaccgttcaccgaaagattgtgaatatgcggacctttcttctcatatggtcgtcggt
gtcgccgcatcacttattccgttcttggaacacgatgatgccaaccgtgcacttatggga
tcgaacatgcagcgccaagcggtaccgttattgcgtccgcaggctcctatggtcggaaca
ggtgtcgagaaacttgttgcccgcgacagctgggagtgtatctatgcgaagcgttcgggt
atcgtcgagaaagccgatgcgaaacatatctatatcaaaggtgaagatgaagatggtatc
tttatagattactatcctctgcaaaagaatcttcgtacgaaccaaaatacgtcgttctcg
caaaaaccgatcgtaaaaatcggtcagtttgttgaaaaaggacatattatcgctgatggt
ccgaacatggatcaaggtgagcttgctcttggcgtcaatgcaatggtcgcattcatgccg
tggaacggatataactacgaggatgcgatcgtcatctccgagcgtatgatccgcgaagat
gcatttacatccgtacatatctatgaaaaagagtgtgaagcacgtgaacttaaacacggt
gtcgaagagattacccgcgatattccaaacgttcgtgaagaggagctggctcatcttgat
gaaagcggtatcgttaaaataggtacgaacgtcaaaggcggtatgatcctcgtaggaaaa
gtaagtcctaagggtgaagttaaaccgactccggaagagagacttttacgtgcgatcttc
ggtgaaaaatcaggtcacgttgtaaataaatctctttactgtccgccgtctatggaaggt
gtggtagtagatatcaagatctttacgaaaaaagggtatgacaaagatcctcgttctctg
gaacttgaaaaagaggagcgtgattacttagagcgcgagcactatgaccgtcttcttatg
atagataaagaggagatattcagaataactgcacttttaacaaaagagccgttaggaaaa
gatatcactatcaacggaacagattataaaaaaggcgacatcatcaacggtgaagacctt
aaagacgtaaaccgttttgctatgaataacattgtcaagtcgttctccgaagatattcag
aaccaatacaatgttatgaaaaactatttccaaaagcaaaagagaatcttccgtgacgag
cacgaagagaaacttgctattttggaaaatgatgacattcttccaaacggtgtcgtaaaa
tacgtaaaagtatatatagcgacaaaacgccacctcaaagtcggtgataagatggcagga
cgtcacggaaacaaaggtatcgtatctaatatagtacctgaggtagatatgccgtatatg
gaagacggacgcagcgttgacgtttgtcttaacccgctaggggttccgtctcgtatgaat
atcgggcaggtgttggagatgcaccttggtatggtcggtcgtgaactgggtcatcagatc
caagcggaatttgatgccaagcaagcagagttcttagataatatccgtgcaaaaatgatc
gaaatatcagatgtttccggacttatgaatgctgctgaagttctagcgaaaatgagtaac
gacgagctgcttaaatatgcgcaggactgggcaaaaggcgtgaagtttgcgacaccgatt
tttgaaggtgtcgatcaagcggaatttgcaaaactgtttgaactggcgaagatggacagt
gacggtaaaaccgttttatttgacggtaaaacaggcgagaagatgcatgaacgtgtaaat
gtcggttatatgtatatcttgaaactgcatcacttggttgatgagaagattcatgcccgt
tccacaggaccatactctcttgttacacagcaaccagtcggcggtaaagcgctcttcggt
ggtcaaagattcggagagatggaagtctgggctcttgaagcatacggtgcttctgcagtt
cttaaagagatgttgaccatcaaatcggatgatgtcgacggccgtgtccgtgcatataaa
gcgcttacaaaaggtgagttggttcctgaatcaggtatcccggaaacattattcgtattg
acaaaagagctgcaatcactggctcttgatgtagagatttttgacgaggttgaagacgat
gagtaa
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