KEGG   Hymenobacter sediminicola: H4317_12580
Entry
H4317_12580       CDS       T09117                                 
Name
(GenBank) carbohydrate-binding protein
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
hsk  Hymenobacter sediminicola
Pathway
hsk00040  Pentose and glucuronate interconversions
hsk01100  Metabolic pathways
hsk02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hsk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    H4317_12580
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    H4317_12580
Enzymes [BR:hsk01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     H4317_12580
SSDB
Motif
Pfam: Pectate_lyase_4 Flg_new_2 CBM_6 Por_Secre_tail CBM_35 BclA_C LPAM_1 Beta_helix
Other DBs
NCBI-ProteinID: QNH61013
UniProt: A0A7G7W3S0
LinkDB
Position
complement(2948158..2950152)
AA seq 664 aa
MNKLLLFLLLALLLAGPGSRAQTPGATFGLFGYAGTTTGTTGGAGGTSVTVNTGTALQAA
INSKGAQPLTIYINGTITPANSPGLDKIEVKNKNDISIIGFATLGEFNGIGIKVFRANNI
ILQNLKVHHVLASFGDGDCISIEGPASHVWVDHCELYNVYQGTGVDDYDGLLDAKSDCEY
LTFSWNYLHDAWKASLMGFTDTDNFDRKITYHHNRFENINSRLPLFRFGSGHVFNNYYKD
IASTCINPRMGACVKIENNYFDNARNPYVTAYSAQDGFGDVSGNVLVNSPFVYASDVRVL
PVCTATIPYAYASVLNPAADVPALVLANAGIGIVGPTLAPGTFQVSTAVVGQGSVSPASG
VYNQGQLLTLTATPASGWQFAGWSGDTTATTNPLTFPVRRSRALTATFTQSTTPGAPGSL
VRIEDSALPATGLCSFDGVVSTNSGADNGSVINLTNSSGRGITWKVEVAPAGLYQLKWRY
VNSSASSAFTAKLSINGTEVNPAVPFPRTSNSTTFALTTLDVTLGPGVNEIRLETTQTAS
FADIDWLEVSGTRLVAANCASAVGTITGVLPVKTPRGAPAVVQVYPNPGKSAFTFDVTLR
RAGHVQAALYSATGAKVADLLPGGKLLPAGTHQLLYQNTTLPAGVYYYILETGYETCSGK
LLVE
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgaataaactactactcttcctcctgctggctctgctgctggccgggccgggcagccgc
gcccagacgcccggcgccacttttggcctgtttggctacgcaggtactactacgggcact
actggcggcgcgggcggcacttctgttaccgtgaacaccggtaccgccctgcaggcagcc
atcaacagcaaaggcgcgcagccacttaccatctacatcaacggcaccatcacgcccgcc
aattcgccgggcctcgacaagattgaggtcaagaacaaaaacgatatttccatcatcggc
ttcgcgacactgggtgagttcaatggcattggcattaaggtatttcgggccaacaatatc
attctgcagaacctgaaagtacaccacgtgctggcttctttcggcgacggcgactgtatc
agcatcgaggggccggccagccacgtgtgggtggaccactgcgagctgtacaatgtgtac
cagggcaccggcgtggacgactacgacggcctgctggacgccaaatccgactgcgagtat
ctgaccttttcctggaactacctccacgacgcctggaaagccagcctgatgggcttcacg
gataccgacaacttcgaccgtaaaatcacctaccaccacaaccgcttcgagaacatcaac
tcccggctgcccctgtttcgcttcggcagcggccacgtgttcaacaactactacaaagac
attgcctctacctgtatcaatccgcgcatgggggcctgcgtgaaaatcgagaacaactac
ttcgacaacgcccgcaacccttacgtgacggcttacagcgcccaggacggattcggagac
gtgtcgggaaatgtgctggtgaacagcccattcgtgtatgcctccgacgtgcgcgtgctg
cccgtctgcactgccaccatcccttatgcgtatgccagcgtgctgaacccggccgccgat
gtgccggcgctggtgctagccaatgccggcatcgggatagtaggccctacgctggccccg
ggcacgtttcaggtgagtacggcggtagttgggcaggggagtgtaagcccggccagcggc
gtctacaaccaaggtcagctgctgacgctgaccgccacgccggcttccggctggcagttc
gcgggctggtccggcgacactacggctaccaccaacccgctcacgtttccggtgcgccgc
agccgcgccctcaccgccactttcacgcaaagcaccacgccgggcgcaccgggtagtcta
gtccgcatcgaggactcggctttgccggccacgggcctgtgcagcttcgatggagtggtg
agcaccaacagcggcgccgacaacggctcggttatcaacctgaccaattccagcgggcgg
ggtatcacctggaaagtagaagtggcgccggcaggactctatcagcttaaatggcgctac
gtgaacagcagtgcttcttcggctttcacggcgaagctaagcattaacggcacggaagta
aacccagctgtaccgttcccgcgcacttctaacagcaccacttttgcgctgaccacgctg
gacgtgacactgggaccgggcgtcaacgaaatcagactggaaaccacccagacggcttct
ttcgcggatatcgactggctggaggtttcaggtacgcgcttggtggctgccaactgtgcc
agtgcggtgggtaccatcaccggcgtgctgcccgtgaagaccccgcgcggcgcgccggcc
gtggtgcaggtctacccaaatcccggcaaatcggcctttacgttcgatgtgacgctgcgc
cgcgccggccacgtgcaggctgcgctttactccgctaccggcgcaaaagtagccgacctg
ctgcccggtggcaagctgctgcccgctggtacgcatcaactgctttaccagaatacgacg
ctgcccgctggcgtgtactactacatactggaaaccggctacgaaacctgttcgggcaag
ctgctggtggaatag

DBGET integrated database retrieval system