Halobacterium salinarum R1: OE_3906F
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Entry
OE_3906F CDS
T00662
Symbol
udg
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hsl
Halobacterium salinarum R1
Pathway
hsl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OE_3906F (udg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsl03400
]
OE_3906F (udg)
Enzymes [BR:
hsl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
OE_3906F (udg)
DNA repair and recombination proteins [BR:
hsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OE_3906F (udg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAP14526
UniProt:
B0R707
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All DBs
Position
1518804..1519385
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AA seq
193 aa
AA seq
DB search
MDGAAVTACCTRCDALVESRSQVVNGDGPSDADVLFIGEAPGATEDDTGVPFVGRSGDVL
DDELAAAGLAREDVRITNCVRCRPPDNRDPHSEELANCRSHLVAEVDSVDPAVIVTLGKV
PSEHVLERSVAVTGEAGSVERVSLGGTTRDVVVCLHPAATLYDASQRPAFRETIEQAATM
AGADGGQARLGDY
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggacggggcggctgtgacggcgtgttgcacgcggtgtgacgcgctcgtggagtcacgc
agtcaggtcgtgaacggcgacggccccagcgacgccgacgtgttgttcatcggggaggcg
ccgggcgcaaccgaggacgacaccggcgtgccgttcgtcgggcgcagcggcgacgttctg
gacgacgagctcgcggccgccgggctcgcccgtgaagacgtccgcatcacgaactgcgtc
cggtgtcggccgccggacaaccgcgatccgcacagcgaggagctcgcgaactgtcggtca
catctcgtggccgaagtcgacagcgtcgaccccgcggtgatcgtgacgctcggcaaagtc
cccagcgagcacgtcctcgaacggtcggtcgccgtcaccggcgaggcgggcagcgtcgaa
cgggtgtcactgggcggcaccacccgggatgtggtggtgtgtctgcatccggctgcaacc
ctctacgacgcgagccagcggccggcgttccgggagacaatcgagcaggccgcgacgatg
gcgggcgcggacggcgggcaggcccggctcggcgactactga
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