Halobacterium salinarum R1: OE_4740R
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Entry
OE_4740R CDS
T00662
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
hsl
Halobacterium salinarum R1
Pathway
hsl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hsl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OE_4740R (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsl03021
]
OE_4740R (rpoA1)
Enzymes [BR:
hsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OE_4740R (rpoA1)
Transcription machinery [BR:
hsl03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
OE_4740R (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HTH_31
HTH_3
HTH_24
Motif
Other DBs
NCBI-ProteinID:
CAP15003
UniProt:
B0R8D4
LinkDB
All DBs
Position
complement(1983861..1986776)
Genome browser
AA seq
971 aa
AA seq
DB search
MSAGQAPKEIGEISFGLMDPEEYRDMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGL
ECKTCGQRSGGCNGHFGHIELAAPVIHVGFSKLIRRLLRGTCRECASLLLTEEEKDEYRE
NLDRTRSLRQDVSDVMTAAIREARKKDHCPHCGEVQYDVKHEKPTTYYEVQQVLASDYSE
RIAASMQPDEDEDDAGVSPQELAEQTDIDISRINEILSGEFRPRREDREAIETAIGADLT
TEDMNKLMPSDIRDWFEDIPGEDLEALGVNSDRSRPEWMILTVLPVPPVTARPSITLDNG
QRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPAR
HRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPDRVATEMT
QTMVVNEQNLERARRYVRNGPEGHPGANYVTRPDGRRVRVTEKVCEELAERVEPGWEVQR
HLIDGDIIIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNMHALQN
EEARAEARVLMRVQEQILSPRFGENIIGAIQDHISGTYLLTNDNPRFNETQASDLLRQTR
IDELPAAAGTDEDGDQYWTGHQIFSELLPDDLSLEFTGTTGDTVVIEDGQLLEGTIADDE
VGEYGSEIVDTITKVHGNTRARIFINEVASLAMRSIMHFGFSIGIDDETVSTEARERIDE
AIQSAYDRVQELIETYENGDLESLPGRTVDETLEMKIMQTLGKARDSAGDVAEENFDEDN
PAVVMANSGARGSMLNLTQMAGCVGQQAVRGERINRGYEDRTLSHFAPNDLSSEAHGFVE
NSYTSGLTPKEFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELETQYDGTVRDTSD
TIVQFEFGEDGTSPVQVSSNEEVDIDVEHVADRILNSEFDSDTQKAEFLEVEEPPTNLSE
HGAAWEVESDD
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaggacaagcccccaaggaaatcggcgaaatcagcttcgggctgatggaccca
gaggagtaccgcgacatgtccgccacgaaggtcatcacggcggacacgtacgacgacgac
ggcttcccgatcgacatggggctgatggacccccggctgggcgtcatcgatccgggcctg
gagtgcaagacgtgtgggcagcgctcgggcggctgcaacggccacttcggccacatcgag
ctcgcggccccggtgattcacgtggggttctcgaagctcatccgccggctcctgcgtggg
acgtgtcgggagtgcgcgagcctgctgctcaccgaggaggagaaagacgagtaccgggag
aacctcgatcggacgcggagcctccgccaggacgtctctgacgtgatgacggcggcgatc
cgtgaggcccgcaagaaagaccactgcccgcactgcggggaggtccagtacgacgtcaaa
cacgagaagccgacgacgtactacgaggtccagcaggtgttggcgtcggattacagcgag
cgcatcgcggcgtcgatgcagcccgatgaggacgaggacgacgctggcgtgagcccccag
gagctcgccgagcagaccgacatcgacatcagccggatcaacgagatcctctccggggag
ttccggccgcgccgcgaggaccgtgaggccatcgagacggccatcggcgcggacctcacc
accgaggacatgaacaagctgatgccgtcggacatccgggactggttcgaggacatcccc
ggcgaggacctcgaagcgctgggcgtgaactcggaccgcagtcggcccgagtggatgatc
ctgacggtgctaccggtgccgccggtgacggcgcgaccgtcgatcacgcttgacaacggc
cagcgcagcgaggacgacctcacgcacaagctggtggacatcatccgcatcaaccagcgg
ttcatggagaaccgcgaggcgggtgcgccacagctcatcatcgaggacctctgggagctg
ttgcagtaccacgtcacgacgttcatggacaacgagatcagcgggacgccgccggcgcga
caccggtccggccgcccgctgaagacgctatcccagcgcctcaagggcaaagaggggcgg
ttccgcggcagcctctcggggaaacgcgtgaacttctccgcccggaccgtcatctcgccg
gaccccacgctgtcgctgaacgaggtcggggtgccggatcgggtggcgacggagatgaca
cagacgatggtcgtcaacgagcagaacctcgagcgcgcccgacgctacgtccggaacggc
cccgaggggcatccgggcgcgaactacgtcacccggcccgacggccgtcgcgtgcgcgtc
accgagaaggtgtgtgaggagctcgccgagcgcgtcgagcccggctgggaggtccagcgc
cacctcatcgacggcgacatcatcatcttcaaccggcagccgtcgctgcaccggatgtcg
atcatggcccacgaggtcgtggtgatgccgtacaagacgttccgcctgaatacggtcgtc
tgtccgccgtacaacgccgacttcgacggcgacgagatgaacatgcacgccctccagaac
gaggaggcgcgggccgaggcgcgcgtgctgatgcgcgtccaagagcagatcctctccccg
cggttcggggagaacatcatcggcgcgatccaggaccacatctccgggacgtacctgctc
acgaacgacaatccgcggttcaacgagacgcaggcgtcggacctgctccggcagacccgg
atcgacgagctgccggcggccgccggcaccgacgaggacggcgaccagtactggaccggc
caccagatcttctccgagttgctgcccgacgacctctcgcttgagttcaccggcacgacc
ggtgacacggtcgtcatcgaggacggccagctcttggagggcaccatcgccgacgacgag
gtcggagagtacggcagtgagatcgtggacaccatcacgaaagtccacgggaacacgcgc
gcccgcatcttcatcaacgaggtcgcgtcgctggcgatgcggtcgatcatgcacttcggg
ttctcgatcggcatcgacgacgagacggtgtcgacggaggcccgcgagcgcatcgacgag
gcgatccagtcggcgtacgaccgcgtgcaggaactcatcgagacctacgagaacggggac
ctagagagcctgcccggccgcacggtcgacgagaccctggagatgaagatcatgcagacg
ctcggaaaggctcgggactccgcgggggacgtcgccgaggagaacttcgacgaggacaac
cccgcggtcgtgatggcgaactccggcgcgcgtgggtcgatgttgaacctcacgcagatg
gcggggtgtgtcggccagcaggcggttcgtggcgagcgcatcaaccgcggctacgaggac
cgcacgctctcccatttcgcgcccaacgacctctccagtgaggcccatggcttcgtggag
aactcctacaccagcgggctgaccccgaaggagttcttcttccacgcgatggggggccgc
gaggggctggttgacacggcagtccggacgtcgaagtccggctacctgcagcgccggctg
atcaacgcgctgtcggagctggagacgcagtacgacggcaccgtgcgggacaccagcgac
acgatcgtgcagttcgagttcggggaggacggcaccagtccggtgcaggtgtcctccaac
gaggaggtcgacatcgacgtcgagcacgtcgccgaccgcatcctgaactcggagttcgac
agcgacacccagaaggccgagttcctggaggtcgaggagccgccgacgaacctctccgag
cacggcgccgcctgggaggtggaatcggatgactga
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