Hippoglossus stenolepis (Pacific halibut): 118104004
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Entry
118104004 CDS
T08308
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hsp04054
]
118104004
Pattern recognition receptors [BR:
hsp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
118104004
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
118104004
NCBI-ProteinID:
XP_035006928
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All DBs
Position
20:20938141..20948588
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AA seq
988 aa
AA seq
DB search
MQLEENIIQYMKNQLKRFQRALSPDCSEYTYLESHSEDEGMMYEDDDEQRRRCRKAFLRI
TVHFLRRMKLNELANSLKNRTRAGVCQRKLKSNLKEKFQCVFEGITRAGNPTFLDQIYTE
LYITEGGTGEVNNEHEVRQIETASWKPDRPETTIRQEDIFKATSGRDGPIRTVLTKGVAG
IGKTVLTQKFTLDWAEDRANPDIQFTFPFTFRELNVLKEKKYSLVELVHHFFTETKEAGI
CRFEEFQVVFIFDGLDECRLPLDFHNTEILTDITASTSVDVLLTNLIRGKLLPSARLWIT
TRPAAANQIPPECVDRVTEVRGFTDPQKEEYFRKRFSDEKQANTIIAHIQTSRSLHIMCH
IPVFCWITATVLKDVLKTREGGELPKTLTEMYIHFLVVQSKLKKVRYDRGAEADPLWSRQ
NRKMIESLGKLAFEQLQKGNLIFYESDLTECDIDIRAASVYSGVFTQIFKEEKGLYQDKV
FCFVHLSVQEFLAALHVHLTFINSGVNLMSKQQAASRLPRVFKDRVKLNVLYQSAVDKAL
QSPNGHLDLFLRFLLGLSVQTNQKHLQGLLTQTGSNGQIKQKTVHYIKEKISQDLSVERS
INLFHCLNELSDRSLEEEIQQSLKSGRLSTEKLSPAQWSALNFILLSSGKDLEVFDLKKY
SGSEEALLRLLPVVKASNKALLSGCNLSERSCKALSSVLSSTSCRLTELDLSNNDLQDSG
VKLLSAGLKSPHCKLETLSLSGCLITDESCAALASALSANHLHLRELDLNNNNLQDSGVK
LLSAGLDDQYWRLDCLKVDNGGEQMLTPGLRKFSCDLTLDPITAHRNLRLSDGYRKLELV
NEQQSYPDDPERFDIFCQLLCRNGLSGRCYWEVVWSGQVDIAVTLRGIRRKGYRKACRFG
GNDQSWCLSCSDYCYSVWHNNTETLVPLPAASISHRVGVYVDCLAGILSFYRVSLDAPIH
LHTFNIKFTNLFYPGFRVWFGSVSLCSE
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcagttagaggaaaacattatccaatatatgaaaaaccagctgaagagattccagagg
gctctgagtcccgactgctcagaatacacgtacttagagagccactctgaggatgagggg
atgatgtacgaagacgatgacgagcagaggaggagatgcagaaaggcctttctgaggatt
acagtgcacttcctcagaagaatgaagctaaatgaactggctaactctctaaaaaacaga
acaagagctggagtgtgtcagcggaaactcaagtctaacttgaaggagaagttccagtgt
gtgttcgaggggatcactagagcaggaaacccaacctttctggatcagatctacacagag
ctctacatcacagagggaggcactggagaggtcaataatgaacatgaggtcagacagatt
gaaacagcatcctggaaaccagacagaccagaaacaaccatcagacaagaagacatcttt
aaagccacatctggaagagacggaccaatcaggacagttctgacaaagggagtggccggc
attgggaaaaccgtcctaacacagaagttcaccctggactgggctgaagacagagccaac
cccgacatacagttcacatttccattcactttcagagagctgaatgtgctgaaggagaag
aagtacagcttggtggagctcgtccatcacttcttcactgaaaccaaagaagcaggaatc
tgcaggtttgaagagttccaggtcgtcttcatcttcgacggtctggacgagtgtcgactt
cctctggacttccacaacacagagatcctgaccgacatcacagcgtccacctcagtggac
gtgctgctgacgaacctcatcagggggaaactgctgccctctgctcgcctctggataacc
acacgacctgcggcagccaatcagatccctcctgagtgtgtggacagggtgacggaggtc
agagggttcactgaccctcagaaggaggagtacttcaggaagaggttcagcgacgaaaaa
caggccaacacgatcatcgctcacatccagacgtcacgaagcctccacatcatgtgccac
atcccggtcttctgctggatcactgctacagttctgaaggacgtgttgaaaaccagagag
gggggggagctgcccaagaccctgacggagatgtacatccacttcctggtggttcagtcc
aaactgaagaaggtcaggtacgacagaggagctgaggcagatccactctggagtcgacag
aacaggaagatgattgagtctctgggaaaactggcttttgagcagctgcagaaaggaaac
ctgatcttctatgaatccgacctgacagagtgtgacatcgatatcagagccgcctccgtt
tactcaggagtgttcacgcagatctttaaagaggagaaaggcctgtaccaggacaaggtg
ttctgcttcgtccacctgagcgtccaggagtttctggctgctcttcacgtccatctgacc
ttcatcaactctggagtcaatctgatgtccaaacaacaagcagcttcacggttacccaga
gtctttaaagacagagttaaactaaacgttctctatcagagtgcagtggacaaggcctta
cagagtccaaatggacacctggacttgttcctccgtttcctcctgggtctttcagtgcag
accaatcagaaacatctacaaggcctgttgacacagacaggaagtaacggacagataaaa
cagaaaacagtccattacatcaaggagaagatcagtcaggatctgtctgtggagagaagc
atcaacctgttccactgtctgaatgaactgagtgaccgttctctagaggaggagatccaa
cagtccctgaaatcaggacgtctctccacagagaaactgtctcctgctcagtggtcagct
ctgaacttcatcttactgtcatcaggaaaagatctggaggtgtttgacctgaagaaatac
tctggttcagaggaggctcttctcaggctgctgccggtggtcaaagcctccaacaaagct
ctgctgagcggctgtaacctctcagagagaagttgtaaagctctgtcctcagtcctcagc
tctacgtcctgcagactgacagaactggacctgagtaacaatgacctgcaggattcagga
gtgaagctgctgtctgcaggactgaagagtccacactgcaaactggaaactctcagtctg
tcaggttgtctgatcacagacgaaagctgtgccgctctagcttctgccctgagtgccaac
cacctccatctgagagaactggacctgaacaacaacaacctgcaggattcaggagtgaag
ctactgtccgctggactggacgaccagtactggagactggactgtcttaaggtggacaat
ggtggagagcagatgctgactcctggtctgaggaaattttcctgtgacctcactctcgac
ccaatcaccgctcacaggaacctccgactgtctgacggctacaggaagctggagctggtg
aacgagcagcagtcgtaccctgatgacccggaaagattcgacatcttctgtcagctgctg
tgcagaaatggtctgagcggtcgctgttactgggaggtggtgtggagtggacaggttgac
atcgcggtgactctcagaggaatcagaaggaaaggttacagaaaggcctgcaggttcgga
gggaacgatcagtcctggtgtctgagctgctctgattattgttattctgtgtggcacaac
aacacagaaacactcgtccctctccccgcggcctccatctcccacagagtgggagtgtat
gtggattgtcttgccggcatcttgtccttctaccgagtttccttggacgcaccgatacac
ctccacaccttcaacatcaaattcacgaatcttttctaccctgggttcagggtgtggttt
ggttcagtgtctctgtgctcggagtaa
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