Hippoglossus stenolepis (Pacific halibut): 118104693
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Entry
118104693 CDS
T08308
Name
(RefSeq) desmin-like
KO
K07606
vimentin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118104693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118104693
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118104693
04147 Exosome [BR:
hsp04147
]
118104693
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
118104693
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
118104693
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118104693
Exosomal proteins of other cancer cells
118104693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
HH_AprE
CC_Bre1
bZIP_2
DivIC
Cep57_CLD_2
DUF1664
CENP-F_leu_zip
SlyX
DUF7491
PUMA_CC
DUF3450
ADIP
TPR
DUF4407
TPR_MLP1_2
DUF2730
WXG100
COLEC12
HB_LcnD
FKBP15
BLOC1_2
Herpes_UL25
Sec10_N
COG3_N
Motif
Other DBs
NCBI-GeneID:
118104693
NCBI-ProteinID:
XP_035007631
LinkDB
All DBs
Position
3:11295548..11298098
Genome browser
AA seq
378 aa
AA seq
DB search
MRATSYSQKSLQVSGSGSRVRVQSPSPSRCRGSSYDSRGRSGYRSTAIELGTEIHEQHAN
EKEEMQELNVKFAGYIEKVQALEQRNAALHAELASLQSRYKGGPTGIGEEYELKFKEVRE
LIEALTNEKGAADIERGYIEEEVDVWKLKLEEELTLKEEAEMILREFRQDVDNATLQKAD
LERRIEQLVAEIEFLKKLHDEEVADLMKQIEDSKITAELDGDRPDLAAYLRNMRAEIESV
AARNVQEAEKWYKSKFDTLKEHAGKHEDQMKTMKDEISTFHNQVTDLQNQIDGLRARNAA
LEQQLEDMEMAHLDKSGGLEGIIAQLEAQLCETKLEMTKYLKDYQELLHIKLKLDAEIAT
YRKLLEGEEQRLGMAKDV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagagccacatcttactcccagaagagcctgcaagttagcggctctggcagcagagta
agggttcagagcccgtcgccctcccggtgccgtggatcctcgtacgacagtcgtggacgc
tccggatatcgcagcaccgccatcgagttgggcacagagatacacgagcagcatgccaat
gagaaagaggagatgcaggagctcaatgtcaagtttgcaggatacatcgaaaaggtccag
gcacttgagcagagaaatgctgctctccacgctgagctggcgtccctgcagagccgctac
aagggaggccccacaggcatcggagaagaatatgagctcaagtttaaagaagtgcgggag
ctgattgaggccctgactaatgagaagggagcagctgatattgagagaggctacattgaa
gaagaggttgacgtgtggaaacttaagctggaggaggagctgacacttaaagaagaggca
gaaatgattcttagggagttccgccaggatgttgacaacgcaacactgcagaaggctgac
ctggagaggcgcattgaacaactggtggctgagatagagttcctcaagaagctgcacgac
gaagaggtggctgacctcatgaagcaaatagaggactcaaagatcactgctgaactcgat
ggcgatcgtcctgacctggctgcctacctgcgcaacatgcgcgcagagatcgagtctgtc
gctgctcgcaatgtccaggaagctgagaaatggtacaagtccaagtttgacaccctcaag
gagcacgctggcaaacacgaggaccagatgaagaccatgaaagacgagatctccactttc
cacaaccaggtgacagacctgcagaaccagatcgatgggctgagggctcgcaacgctgcc
ctggagcagcagcttgaggatatggagatggcccaccttgataagtcgggaggcctagag
ggtatcatcgctcaattggaggcccagctctgcgaaaccaagctagagatgaccaagtat
ctcaaagattatcaagaactgctgcacattaagctgaagctggatgcagagatcgccaca
tacaggaagctgctggaaggcgaggagcagaggcttgggatggccaaagatgtctga
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