Hippoglossus stenolepis (Pacific halibut): 118114383
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Entry
118114383 CDS
T08308
Symbol
ncam3
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
hsp04514
Cell adhesion molecule (CAM) interaction
hsp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
118114383 (ncam3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118114383 (ncam3)
04517 IgSF CAM signaling
118114383 (ncam3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118114383 (ncam3)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118114383 (ncam3)
04090 CD molecules [BR:
hsp04090
]
118114383 (ncam3)
00536 Glycosaminoglycan binding proteins [BR:
hsp00536
]
118114383 (ncam3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hsp00537
]
118114383 (ncam3)
04091 Lectins [BR:
hsp04091
]
118114383 (ncam3)
Membrane trafficking [BR:
hsp04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
118114383 (ncam3)
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
NCAM1/2
118114383 (ncam3)
CD molecules [BR:
hsp04090
]
Proteins
118114383 (ncam3)
Glycosaminoglycan binding proteins [BR:
hsp00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
118114383 (ncam3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hsp00537
]
Others
118114383 (ncam3)
Lectins [BR:
hsp04091
]
I-type lectins (Siglecs)
118114383 (ncam3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
FN3_DSCAM-DSCAML_C
fn3
V-set
Ig_6
C2-set_2
Ig_PDGFR_d4
Ig_4
Ig_5
Zwei_Ig_N
C2-set
Lep_receptor_Ig
Motif
Other DBs
NCBI-GeneID:
118114383
NCBI-ProteinID:
XP_035020725
LinkDB
All DBs
Position
8:5520311..5528797
Genome browser
AA seq
672 aa
AA seq
DB search
MTNPSALLRLASLLLLLVCGTDAEIQIIPNKIDVLVGGDTLLLCKAGGEADITWQKDGED
IEEEKVTKIDETSSKLIIKNVTIQNTGKYTCVCEFESGHNDKVQAQLFVYEGPSFGGTTI
YHEFLEGTNGVVPCLATGRPAVDIQWIRNTQEIPSKEGGRLRRLPDNTLHIEKVRREDAG
TYVCQAQIRGRTIYQQLSVSVVINAPPKVHLREEVKKVMAGSETNESLLCLVDGHPKPNI
TWTMPLSLDPFRHQFNSDRSQLTIRAVARADFGEYICTAANKIGEDRATIMLHVFEAPEV
FVSAVQQSVSGGERASVSCNVSGHPQPELHWLNKNNGQTLDSTSGRIHVVDGVLLIDDMM
PSDGGTYSCMAVSISRNASRDVKIYTQPGLPHYLSVSPGPTSVFFSLKTLPISGGMPITS
FALQWRQSSAEKWNEVTLPASDPLAVTALKPYTLYTVRLAALNAAGLGQFSDPNSVRTQG
IREPDSPVLSLNEIKVKGNTFSTPLKQIDDGGVPLLHFIIRYKQDKEGAEWKEMQLPSTT
DTVSLKDLSFGSDYQLEVTAVNTNGSSIPATLNFTIAEKPPSSRTMTILMTIAVKLFGHQ
VPGLKMLEEGSGSTNGDVTLKGMSTPRGSMQQVGVQTITKEGGQLTEVTCDKAPLTKNEK
THPDRNQSAADA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacccatcagctctcttgagactggcctcactgctgctgctgctggtgtgtggc
acagatgcagagatacagatcatacccaacaagatagatgtgctggttggaggagataca
ttactattgtgtaaagctggaggagaggcagatataacatggcagaaggatggggaagac
attgaagaagaaaaggtgacaaagattgatgagacctcctctaagctgatcattaagaat
gttactatacagaacacaggcaaatacacttgtgtgtgcgaattcgaatcgggacacaac
gacaaggtccaagcacagctgtttgtttatgagggtccatcatttggaggcaccacaatc
taccatgagtttctggagggcacaaacggggtggtgccgtgcctggcgactggccggcca
gcagtggacattcagtggattcggaacacgcaagaaatcccttctaaagagggaggacgt
ctgcgtcgacttcctgataacacactccatattgaaaaagtgaggagagaggatgctggg
acgtacgtgtgtcaggcgcagatcagaggacgaaccatttaccagcagctctctgtctct
gttgttatcaacgctcctcctaaagtgcatctgagagaggaggtgaagaaagtaatggct
ggatcagaaaccaacgagtctttgctttgtttggtggacggccacccgaaacccaatatc
acctggaccatgccgctgtcattagacccttttcgtcatcagttcaactcagaccgcagt
cagttgactatacgggctgtagcgagagctgacttcggggagtacatctgcaccgcagcc
aacaagataggagaggaccgtgcaaccatcatgcttcatgtttttgaggccccagaggtg
tttgtgtcagcagtgcagcagagcgtgtcagggggcgagcgtgcgtctgtgtcctgtaac
gtctctggacatcctcagcccgagctacactggctcaacaagaacaatggacagacactg
gactcgacttctggtcgtatccatgtggtggacggtgtgttgctgatagatgacatgatg
ccctctgatggtgggacgtattcttgcatggcagtcagcatatctaggaatgcatccaga
gatgttaaaatatacacccagcccggtctccctcactacctgtcggtctcgcctggccct
acctcagtcttcttctccctcaagactctacccatcagtggaggaatgccaatcacaagt
tttgccttgcagtggaggcagagctcagcagaaaagtggaacgaggtcacactaccagct
tcagatcccctagctgtcaccgccctcaagccttatacattgtacacagtgcgtttagct
gccttgaatgcagcaggactaggacagttctctgacccaaacagcgttcgcacccaggga
atacgtgaacccgacagtccagttttgtcgctcaatgagattaaagtgaagggcaacacc
ttctctacccctcttaagcagatagacgatggcggagtgcctctgctgcacttcatcatt
cggtacaaacaggataaagaaggggctgagtggaaagagatgcagctgccgtccaccact
gacaccgtctcccttaaagacctgtcttttggctcagactaccaactggaggtcacagcg
gtgaatactaatggttcctctattcctgccacattgaacttcaccatcgcggaaaagcct
ccgagtagccgtaccatgaccatcctcatgaccatcgctgtgaaactctttggacatcaa
gttccaggcctcaaaatgctggaggaaggatcggggagcactaacggagacgtgacgctg
aaaggcatgtccactccgagaggcagtatgcaacaggtgggggttcagacaatcaccaag
gagggggggcagctcacagaggtcacctgcgacaaagcccccctcaccaaaaacgagaaa
acacatccagatagaaaccagtccgctgctgacgcatga
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