Hippoglossus stenolepis (Pacific halibut): 118124593
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Entry
118124593 CDS
T08308
Symbol
tap2a
Name
(RefSeq) antigen peptide transporter 2a
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp02010
ABC transporters
hsp04145
Phagosome
hsp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118124593 (tap2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118124593 (tap2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118124593 (tap2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsp02000
]
118124593 (tap2a)
Enzymes [BR:
hsp01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
118124593 (tap2a)
Transporters [BR:
hsp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
118124593 (tap2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
MFS_1
AAA_30
TerL_ATPase
AAA_29
AAA_15
RsgA_GTPase
Rad17
AAA_16
Motif
Other DBs
NCBI-GeneID:
118124593
NCBI-ProteinID:
XP_035038481
LinkDB
All DBs
Position
17:1195719..1203390
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AA seq
714 aa
AA seq
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MAGKTSLTHKAAALIAAVCVDLSLLYASGLVVTLSVSSHLARLWVCAALRCSALTVLSLL
ALGDLRPLLVRVIAAYCLLPAVFETGSEALYHDKGQCGRLADARCCWLLCAAASMAAALF
WEITFPDTDQAAAGKETRQKARVLFVRVLRLYRPDYLLLLGGSVFLSLAVVCEMFIPFYT
GRVIDILGGQYQLSEFRSALLFMGLYSLGSSVSAGCRGGLLLCAISAFTCRVKVKLFGAL
TKQEIGFFETIKSGEITHRLSKDTELMGRTVCLNVNVLLRTLIKTLGMISLMMNLSWKLT
FLVLMETPVTGLIQNIYDTHHQRLSLAMQNSMASANEAAREVVSSIRVARSFNAEKHEAR
RYGDRLMDMQALKTRRDIVGAVYLLVRRLTGLVMQVLMLYYGRLFIQSGQMTTGNLLSFI
LYQSDLGHSIRTLAYIVGDMLNSVGAAGKVFDYLDRKPQVSTDGKLKPDRLMGHVSFHRL
SFAYPGKPNKTVLQDFSLELKPGQMTALVGPSGEGKSTCVSLLERFYEPQDGQILLDNKP
LKSYDHRFLHEKVAVVSQDPVLFSGSIRDNIAYGLAGCSLDEIQEAACQANAHDFIKLLA
KGYDTEVGEGGGQLSKSEKQRIAIARALVRKPQVLILDEITSSLDTENQNKVQQALTERP
NQTKLVIAHKLETVKRADQIAVIGGGKVEERGTHQQLMDLKGSYYQLVERHFAE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaaaacatcactcactcacaaagcggctgctctgatagcggccgtgtgcgtc
gacctgtctttgctttacgcgtcaggacttgtggtgacgctcagcgtctcttcgcatctt
gcacgtctctgggtttgtgcggctctccggtgctcggctctgacggtcttgtccttgctc
gccctcggggacctcaggccgttgctggtgcgtgttatagcggcgtactgtctgctcccc
gcggtgtttgagaccggctccgaggcgctgtaccatgacaagggccagtgtgggagactg
gcggatgcgcgctgctgctggctgctgtgcgccgccgcgtccatggctgctgcgctgttc
tgggagatcaccttcccggacaccgaccaggcggccgccggtaaagagacgaggcagaag
gcccgggtgctgttcgtgagagtgctgaggctgtacagacccgactacctcctgctgctg
ggagggtctgtgttcctgtcgctggctgttgtctgtgagatgttcattccgttctacact
gggagagtcatcgacatcttgggtggtcagtaccagctgagtgaattcagatcagctctc
ctcttcatgggcctgtactctttgggaagctcggtcagtgcaggctgcagagggggtctt
ttgctttgtgccatcagcgccttcacatgcagagtgaaagtcaaactgtttggggctttg
accaaacaggaaattggattcttcgagaccataaagtcaggtgaaatcacacataggttg
tcaaaagacaccgaactgatgggaagaaccgtgtgtttgaacgtcaacgtgctgctcagg
acactcatcaagaccctgggcatgatctccctgatgatgaatctgtcatggaagctcacg
ttcctggtactgatggagacgcccgtcaccggcctcattcagaacatctacgacacacac
caccagaggttgtccctggcgatgcagaactcgatggcgtcggcaaacgaagcagcgagg
gaggtggtgtccagtattcgtgtggcgcggagctttaatgcagaaaaacacgaggcccgt
cgctatggtgaccgtttgatggacatgcaagccctcaagacccggcgggacattgtcggt
gcagtttacctgctcgtgcggaggttgacagggttggtcatgcaggtcctaatgttgtac
tacggcaggttgttcatccagagcggacagatgaccactggcaacctgctctccttcatc
ctctaccagtcagaccttggacacagcatcaggacactcgcctacatcgtcggtgacatg
ctgaactcggtgggggctgcggggaaagtgtttgattatctggacagaaaacctcaagtc
agcacagatggaaaactcaaacccgatcgactgatgggacacgtcagcttccaccgtctg
agcttcgcttatcctggaaaacccaacaaaacagtgctgcaggatttttctttggagctg
aagccgggtcagatgacggcgctggtgggtccatcgggagagggaaaaagcacctgtgtc
agtctgctggagcgattctacgagccgcaggatggacaaatcctattggacaacaagcca
ctgaaatcctacgaccaccgtttcctccatgagaaggtcgcagtagtgagccaggaccct
gtgctcttctctggctccattagagacaacatcgcctacgggctcgctggctgctcattg
gacgagatccaggaggcggcgtgccaagccaacgcccatgacttcatcaagctgctggcg
aaaggctacgacacagaggtgggtgaaggcggtggccagttatccaagagcgagaagcag
cggatcgccatcgctcgagctctggtcagaaagccacaggtcctcattctggacgaaata
accagctccctggacactgagaatcaaaataaggttcagcaggccctgaccgagcgtccc
aaccagaccaagctggtgatcgctcacaagctggagacggtgaagagggcagatcagatc
gctgtgatcggtgggggcaaagtggaggagcgagggactcatcaacagctgatggacctg
aaggggagctactaccagctggtggagaggcacttcgctgagtga
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