Hippoglossus stenolepis (Pacific halibut): 118125305
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Entry
118125305 CDS
T08308
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04145
Phagosome
hsp04814
Motor proteins
hsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118125305
09142 Cell motility
04814 Motor proteins
118125305
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118125305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118125305
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118125305
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
118125305
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
118125305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynein_IC2
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WDR55
Beta-prop_EML
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
118125305
NCBI-ProteinID:
XP_035039658
LinkDB
All DBs
Position
17:12817357..12873761
Genome browser
AA seq
669 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEVRKKAESQQKAEVTPEDSDLDRKR
RETEALLQSIGISPEPPLVHSLQPLMLDSCCFHYLVPTPVSPSKSLSTPSETGSQDSADG
GAAGRFRSGFSKNKSQALIARTLQWDTDPSVLQLQADSELGRRMQKLGASKITQVDFLPK
EMVSYSKETQTPLAAHLSEVEEEEEDEEMMEAKPGPESEQQDEDDNRENKEGTFSVLREL
TEEERQQILHSSEFQSFFDCSIRVMERALAEDSDIFFDYSGRDPEDKEGDSGSGSSLSFS
RLFYDEHWSKHRVVTCLDWSPQYPELMVASYNNNEDAPHEPDGVALVWNIKFKKSTPEYI
FHCQSPVVSVGFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCIN
VVGTQNANNLITVSTDGRMCSWSLDMLSQPQETMELVYNKSKPVAVTGMAFPTGDVNNYV
VGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGVSCHSAVGTVDFSHLFITSSFDWTVKL
WSTKQNKPLYSFEDNADYVYDVMWSPVHPAIFAAVDGMGRLDLWNLNNDTEVPTASVTIE
GASALNRVRWASGGREVAVGDSEGRVWIYDTGELSVAHPDDWGRFARTLMEIRANRADGE
EEGPVELAS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaaaagtgacctaaaagccgagctcgagcgcaagaagcagcgcctcgcccaa
atcagggaggaaaaaaagagaaaggaggaggagaggaagaagaaagaggtaaggaagaaa
gctgagagccagcagaaggcagaggtgaccccagaggattcagacttggatcgtaagcgc
agggagactgaggccctcctacagagcatcggtatatcgccagagcctccactagtccat
tctttgcagcctttaatgttagactcatgttgctttcattatttagtcccgacccctgtg
tccccctcaaaatcattgagcacgcccagcgagacggggagccaggactcagctgatgga
ggcgcggccggcaggtttaggtcagggttctctaaaaacaagtcccaagcactgatcgca
aggacgctgcagtgggacacagacccctctgtgctgcagctgcaggcggattctgagctc
ggacggaggatgcagaagctgggggcctccaagatcacacaggtagacttccttcccaaa
gagatggtctcttacagcaaagagacgcagacgccgctcgccgcccacctgtctgaagta
gaggaggaggaggaagatgaggagatgatggaggcaaagccaggccccgagtcagagcag
caggatgaagacgacaacagagaaaacaaagaaggcacattttcggtgctgagggagctg
acagaggaagagcggcagcagatccttcactcctctgagtttcagagtttctttgactgc
agcatccgagtgatggagagagctctggccgaagacagcgacatcttctttgactacagc
ggccgagacccggaggacaaagagggagactctggcagtggctccagtctctctttcagt
cgactcttctacgatgaacactggtcgaaacatcgcgtcgtcacctgtctcgactggtcc
cctcagtatccagagttgatggttgcctcctacaacaataatgaagatgctcctcatgaa
ccagacggtgttgccctggtgtggaacatcaaatttaagaaatccacacctgagtacatc
tttcactgtcagtctccagtggtgtctgtgggcttcgccaggtttcatcccaacctggtg
gtgggggggacgtactcggggcagattgtgctgtgggacaaccgcagtcaccgccggacg
cctgtgcagaggactcccctgtctgctgctgcacatacacacccggtgtactgcataaac
gtggtcggcacccagaatgccaacaacctgatcacagtgtccacggacggcaggatgtgc
tcctggagtctggacatgttgtcgcagccacaggagaccatggaactggtgtacaataaa
tccaaaccggtggcggtgacaggcatggccttccccacgggagacgttaacaactatgtg
gtggggagtgaggagggcacagtttacactgcatccagacacggcagtaaggcaggtatc
tgtgagatgttcgagggccaccaggggcccgtgacgggcgtcagctgtcacagcgcagtg
ggcacggttgacttctcccacctcttcatcacatcgtcattcgactggactgtcaaactc
tggagcaccaagcaaaacaagcctctgtactcgtttgaggacaacgcagactacgtgtat
gatgtcatgtggtcacctgtgcaccccgccatcttcgccgccgtggatggcatgggtcgc
ttggacctgtggaacctcaacaatgacactgaggtaccgacagctagcgtgaccattgaa
ggcgcgtcggccctcaacagggtccgctgggcctcaggagggagggaggtggctgtgggc
gactcagagggacgagtgtggatctacgatactggagagctgtccgtggcccacccagac
gactggggccgcttcgcccgcaccctgatggagatccgggccaaccgggccgacggcgag
gaggagggtcctgtggagctggcttcatag
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