Hippoglossus stenolepis (Pacific halibut): 118125799
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Entry
118125799 CDS
T08308
Symbol
lrsam1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1 isoform X1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118125799 (lrsam1)
04121 Ubiquitin system [BR:
hsp04121
]
118125799 (lrsam1)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118125799 (lrsam1)
Membrane trafficking [BR:
hsp04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
118125799 (lrsam1)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118125799 (lrsam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
zf-C3HC4_3
LRR_8
LRR_4
SAM_2
SAM_1
Prok-RING_4
zf-RING_2
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
118125799
NCBI-ProteinID:
XP_035040701
LinkDB
All DBs
Position
18:complement(19901649..19925316)
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AA seq
749 aa
AA seq
DB search
MLLFFRKRKPSDDSQKRLEYQLCRSKEAGADDILDISACELSDVPSSAFSMCKVLQKKVF
ILHNNELKTMLPKGCDIRSLATLKVLDLHENKIISLPEDIGKLVSLQILNVEKNRLKVLP
DSIGDLKLLQTLNLKGNFLSELPSSVGSLSSLRSLDLSDNNCVQLPKPLAYIRTLESFTL
DAAMMTYPPASVCSEGTESIQRFLCTELGEEYCPPSQYLLPVLENDCDKQNCDEWDGLEE
AWKNKFSDYEKRKDQKQQEKLAFERHLVERQKEHTQLVLMNTSRKENVLNSVRQEQERLE
HGVSQQQRAQEAERLLVLEKVRQAEDGISSRISNMLMDNQRQKKSTEFLQAMEEDRIRME
HLTSITQEEATSLRKREVAAAMQKMLSYTCAMNLLQEASDCRRQSLVSEANRRSNPQNTP
DIRSEQIMENLDKRFDKMLSLQALDKSKAIAHILQEEEMQKVAFQALQLEKDAVHGYIRN
EIKLIEGELMQLTKLEIKKRNLDAENLQEVLVEQRTALTDLLQQLLKQREQREQELRQIL
VELEQKCESNQQNYWMIQYQRLLDAKPMSLRMQEAGVEKELVNLLCKLAAQHYLPILAHH
RVTTEALRHMSSSDLKKLGINELGIQKALLNWAKEHQPEAGACKVVPQDEAAEVIPTAPS
PPSPLAFPSTSAAQIPSPPLTPGTPVTPGGPSPVEGPGSSECVVCMEKESQVIFLPCGHV
CCCQVCSNALQNCPLCRSNISQHVRLYHS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgttcttcaggaagaggaagcccagcgatgactcccaaaagagactggaatat
cagctgtgccggtctaaggaggcgggtgccgatgacatcctggatatctcagcttgtgag
ctctcagatgttccctcaagtgccttttccatgtgcaaggttctacagaagaaggtcttt
atcctccacaacaatgagctgaagacaatgctgcccaaaggatgtgacatccgttccctg
gccactttaaaggttttggatctgcatgaaaataagatcatatcgctgccagaagacatt
gggaagctggtttcactgcagattctgaatgtggagaagaatcgtttaaaggtattgcca
gattccatcggggacctgaagcttctgcagacactcaatttgaagggtaactttctcagt
gagctgccgtcatcagttggctctttgagcagcctgcgctccctggacctgagtgataac
aactgtgtccagctccccaaacctctggcctacatccgcacgctagagagctttacactt
gatgctgccatgatgacctacccacctgcatctgtgtgctcagaaggcacagagagcatt
caacgcttcctatgcacagagctgggagaggagtactgcccaccatcccagtacctcctg
ccagtgctggagaatgactgtgacaaacagaactgtgacgagtgggatggtttggaggag
gcctggaagaacaaattcagtgactacgagaagagaaaggatcagaagcagcaggagaaa
ctggcctttgagcggcacctcgtagagaggcaaaaggaacatacccagcttgtgctcatg
aacacctcccgcaaggaaaacgtactcaactcagttcgacaggagcaggagcgtttggag
catggagtcagccaacagcagagggctcaggaggccgagaggctgctggtgctggaaaaa
gtgagacaagctgaagacggcatcagcagccgtatcagcaacatgctgatggacaaccag
cggcagaaaaagagcacagagtttcttcaagccatggaggaagatcggatccgtatggag
catctgacttccatcacacaggaagaggccacttcactgaggaagagggaggtggcagcg
gccatgcaaaagatgctgtcatacacctgtgctatgaacctccttcaggaagccagtgac
tgccgcagacagagcctggtctctgaggccaatagaaggtcaaacccccaaaacacacca
gatatcagatctgagcagattatggagaatttggacaagaggttcgataagatgctgtcc
ctccaagctttggacaagtctaaagccattgcccacatcttgcaagaggaggagatgcag
aaagttgcgttccaggcattgcagttggagaaagatgctgtacacggctacatccgcaac
gagatcaagctcatagagggtgaattaatgcaactgactaaactggaaattaaaaaacgc
aatctggatgctgagaacctgcaggaggttctggtggagcagcgcacagctctcactgat
ttgttgcagcagctgctgaagcagagggagcagagagagcaggagctgcggcagattctg
gtggagctggagcagaagtgtgagtcgaaccagcagaactactggatgatccagtatcag
aggctgctggatgccaagcccatgtcactgcgaatgcaggaagcgggcgttgagaaagag
ctggtgaacctgttgtgtaaactggcggctcaacattacctgcccatcctggctcatcat
cgagtgacaactgaggcccttcgccacatgagctcctctgacctcaagaagcttggcatt
aatgagttaggaatccagaaagctcttctgaactgggccaaggaacaccaaccagaagca
ggcgcatgtaaggtggtccctcaggatgaggcagcagaagtcatccccacagctccatct
cctccctcccctcttgcttttcccagtacatcggctgcccagatccccagcccaccactc
accccaggaacccctgtcactccgggaggacccagccccgtggagggaccggggagctct
gagtgtgtggtctgcatggagaaagagtctcaggtcatcttcctgccctgtggtcatgtt
tgctgttgtcaggtgtgcagcaacgctctgcagaactgccctttgtgtcgcagcaacata
tcgcagcatgtacgactctaccacagctag
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