Halomonas sp. A40-4: IT895_16660
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Entry
IT895_16660 CDS
T11047
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
hspe Halomonas sp. A40-4
Pathway
hspe00260
Glycine, serine and threonine metabolism
hspe01100
Metabolic pathways
Module
hspe_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
hspe00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IT895_16660
Enzymes [BR:
hspe01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
IT895_16660
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
IT895_16660
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
NAD_binding_8
HI0933_like
GIDA
DAO
Pyr_redox_3
AlaDh_PNT_C
FAD_binding_3
Thi4
Pyr_redox
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QPL48218
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All DBs
Position
complement(3566559..3569597)
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AA seq
1012 aa
AA seq
DB search
MKQPNRVREGGRIDRAQTLSFTFNGKQYQGHAGDTLASALLANGVNIVNRSFKYSRPRGI
VAAGAEEPNALVQLGSTEAAQVPNVRATQQALFDGLVARSTNGWPNVQRDVMSLVGKLGG
QFMPPGFYYKTFMAPASMWMTYEKVIRKGAGLGRSPMERDPDHYDHLNQHCDLLVVGAGP
AGLSAALTAARSGARVILCDEQEEMGGSLLDSREQLDGQPAHHWVEGVVNELAQMANVTL
LPRTTANGYHDHHFVTLHERRTEHLGETAPLTDGQRPSRSRMHRVRAGQALLATGAHERP
LVYGNNDVPGNMTAGAVSTYIRRYGVVPGNKLVLSTTNDYAYRAALDWLDAGREVVAIVD
ARKAPEGDLVEQARVRGVRIIEGAAVLEAKGSDRVTGARVATIDAETFKVTGSSDTLLCD
TIASSGGYSPAIHLASHTGARPTWNDEILGFVPSLVKGVHAAGSVRGFHQLADGLANGCS
AAAEALSALGFAATPVELPQVNTYRQGAACALYQVPHEKPTLRGPKQFVDMQNDVTAAAI
ELATREGFESIEHVKRYTAMGFGTDQGKLGNINGMAIAARCLGKTIPEVGTTVFRPNYTP
VTFGAIVGRHCRDLFDPERYTAMHQWHVEQGAEFEDVGQWKRPWYFPRTVNGKTESMHDA
VARECLAVRQGVGILDASTLGKIDIQGPDAREFLGRVYTNKWAKLAPGRVRYGLMCKDDG
MLMDDGTTSCLGENHFLMTTTTGGAAGVMEWLELWHQTEWPDLQVYFNSVTDHWATITVT
GPEARKLLAEITDIDLDRETFKFMDWREGTVADVPARVFRISFTGELSFEINVQANYALH
VWKTLFAHGEKYDLTPYGTETMHVLRAEKGLIIAGQETDGSVTPEDLGMQWAVGYDKPFP
WIGKRALTRSDTRRVDRKQMVGLMPKDPSVVLEEGAQIVFDPDHAIPMPMVGHVTSSYYS
PILESGFALAVIKGGHQRMGEIVYLPMVDGKTHAAEIVSPVFYDPKGERQHV
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
ctgaaacagccgaatcgtgttcgcgaaggggggcgaattgatcgcgcccaaacgttgagc
tttaccttcaatggcaagcaataccagggccatgccggtgataccctggcctcggcgctg
ctcgccaacggggtgaacatcgtcaaccgcagcttcaagtattcacggccccgggggatc
gtcgcagcgggggctgaagagcccaatgccctggtgcagttaggcagcaccgaagccgcc
caggtgcccaacgtgcgtgccacgcaacaggccctttttgatggcctggtggcgcgcagt
accaacggttggccgaatgtccagcgggatgtcatgagcctggtcggcaagcttggtggg
cagtttatgccgccggggttctactacaagacgttcatggcccccgcttccatgtggatg
acctacgagaaggtcatccgtaaaggggcggggcttggccgcagcccgatggagcgcgat
ccggatcattacgatcacctcaaccagcattgcgatctgctggtcgtgggtgccggtccg
gcagggttatccgcggcgctgacggcggcgcgaagcggtgcccgtgtgatcctgtgcgat
gagcaggaagaaatgggcggttcgctgctcgatagccgcgaacagctcgatggccaaccg
gcccaccactgggtcgagggcgtcgtgaacgagcttgcccagatggcgaacgtcaccctg
ctgccgcgtaccacggcgaatggttaccacgaccatcactttgtcacgctgcatgagcgg
cgcaccgagcaccttggtgagacggcgccgctcaccgatgggcagcggccgagccgttcg
cgcatgcaccgcgtccgggccgggcaagcgctgctggcgacaggtgcccatgagcggcct
ctggtgtatggcaataacgatgtgccgggcaacatgaccgcgggtgcagtgtccacctat
attcgtcgttatggcgtggtacccggcaacaagctggtgctttcgaccaccaacgattac
gcctaccgcgcggccctggactggctcgatgccggccgtgaagtggtcgccattgtcgat
gcccgcaaggcccctgaaggtgacctggtcgaacaggcccgggtgcgcggtgtgcgcatt
atcgaaggcgccgccgtgctggaagccaagggcagcgaccgggtgaccggcgcccgcgtc
gccaccatcgatgcggaaaccttcaaggttaccggctcctcagacaccttgttgtgcgac
accatcgccagctccggcggctatagcccggcgattcacctggcgtcgcataccggagca
cggccaacctggaacgacgagattctcggttttgtgcccagcctggtcaaaggcgtgcat
gcggcgggcagcgtgcggggctttcatcagctcgcggatggcctggcaaatggctgttcc
gcagcggctgaggcgctatcggcgctgggctttgcggcaacgcctgtcgagctgccacag
gtcaacacctaccggcagggtgccgcctgcgcgctgtaccaggtgccccatgaaaaaccg
accctgcgcggccccaagcagttcgtggatatgcagaacgacgtgaccgctgccgcgatc
gagctggcgacgcgggaaggatttgaatccatcgagcacgtcaagcgctataccgcgatg
ggctttggcaccgaccagggcaagcttggcaatatcaacggcatggccattgcggcacgc
tgcctgggtaaaacgatcccggaagtggggaccaccgtgttccggcccaactatacgccg
gtgacctttggcgccattgtgggccgtcactgccgtgacctctttgaccccgagcgctat
accgccatgcaccagtggcacgtggagcaaggggccgagtttgaagacgtgggtcagtgg
aagcgcccctggtactttccacgaaccgtcaatggcaagacagaatcgatgcacgacgcc
gtggccagagagtgcctggcggtccgccagggggtcggcattctggatgcctcgacgctg
ggcaagatcgatatccagggccctgacgcccgcgagttcctggggcgggtttacaccaac
aagtgggccaagctggcgcctgggcgggtccgttacggtctgatgtgcaaggacgacggc
atgctgatggatgatggcaccaccagctgcctgggcgagaaccacttcctgatgaccacc
accaccggcggtgcagcgggtgtgatggagtggctggagctgtggcaccagaccgaatgg
cccgacttgcaggtgtatttcaattcggtgactgaccattgggcgacgatcacggttacc
ggtcctgaggcacgcaagctgcttgccgagatcaccgatatcgacctggatcgcgagacc
ttcaaattcatggactggcgcgaaggcacggtggccgatgtccccgcccgggtcttccgt
atctccttcacgggcgagctgtccttcgaaatcaatgtgcaggccaactatgcgctgcat
gtctggaagacgctgttcgcgcacggtgaaaaatacgatctgaccccctatggcaccgag
accatgcacgtgctcagggccgagaagggactgatcattgcaggacaggagacggatggc
tcggtcacgccggaagacctcggcatgcagtgggcggtgggctacgacaagccttttccg
tggatcggcaagcgagccctgacccgttcggatacgcggcgcgtggatcgcaagcagatg
gtcgggcttatgcccaaggacccctcggtggtgctggaagaaggcgcgcagatagtgttt
gaccctgaccacgccatccccatgccgatggtgggccatgtaacgtccagctattacagc
ccgatactcgaaagcggctttgcactggcggtgatcaaaggcgggcatcagcggatgggc
gagatcgtctatttgccgatggtcgatggcaagacccatgccgccgaaatcgtcagcccc
gtcttttacgaccccaagggagagcgtcagcatgtctga
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