Hyla sarda (Sardinian treefrog): 130273996
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Entry
130273996 CDS
T11475
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
hsq Hyla sarda (Sardinian treefrog)
Pathway
hsq03013
Nucleocytoplasmic transport
hsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130273996 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
130273996 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsq03019
]
130273996 (THOC1)
03041 Spliceosome [BR:
hsq03041
]
130273996 (THOC1)
Messenger RNA biogenesis [BR:
hsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
130273996 (THOC1)
Spliceosome [BR:
hsq03041
]
Complex C
Other components
EJC/TREX
130273996 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130273996 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130273996
NCBI-ProteinID:
XP_056377653
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Position
5:267968626..268048358
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AA seq
674 aa
AA seq
DB search
MVPVTSSGCAAETCNWCNMSPPLFSLPEARSKLTAATREAVPGKNIKHLLNVFGQVPGSE
NEKKPTLDQVFRVVLEEEIINQASCDNCLAIISLAINGVSEGICTATTPFVLLGDVLDCL
PLDHCDKIFTFVEKNVGTWKSNMFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLA
RLFPLSEKSGLNLQSQFNLENVTVYNVNEQESTLGQKQVEDREDGMEIEEGEMGDDEAPN
SSSIPIDYNLYRKFWSLQDFFRNPVQCYDKSSWKTFLKFSEEVLQVFKSYKLDDTQASRK
KIEELKSGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYV
LMDDQSLWIENTTKLVYQLLCETPSAGDKFSKTIEHILNTEENWNSWKNEGCPSFVKERQ
PDNKQLKMARKRQGPEDFLGKGSNKKILMGNEELTRLWNLCPDNIEACKSETREFMPSLE
QFFEEAMEQADPENMVEDEYKVVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLEN
MVIKIAKELPPPSEEIKTGEDEDDEDNESLLKENNESPEVQQQKVVTGDLIESLANKLGE
QWKTLAPHLEMKDSDIHSIESDSEDVKMRAKLLLVAWQDREGAHATVENLNAALSQAQLS
DLVENLCSDSENGT
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggtaccggtgacgtcatcgggatgcgccgctgagacttgtaactggtgcaatatgtct
ccgccgttgttcagtcttcctgaggcgcggagtaaacttacggctgcgaccagagaagcg
gtgcccgggaagaacatcaagcacctactgaacgtgttcggccaggtccccggcagcgaa
aatgagaagaagccgaccctcgaccaagtcttcagagtggtcctggaggaggagattata
aatcaagcttcgtgtgacaactgtcttgcgattatttcacttgctatcaacggagtttca
gaaggtatatgcacggctaccactccatttgttcttctgggagatgtccttgactgcctt
cctctggatcactgtgataaaattttcacatttgtggagaaaaatgttggaacatggaaa
tccaatatgttttattcagctggaaagaactacctgcttagaatgtgtaatgatctctta
agaagactctctaaatctcaaaatactgtgttctgtggaagaattcagctgttccttgca
cgcttgtttcccctctcagaaaaatctggtttgaatttgcaaagtcaatttaacttggag
aatgttaccgtttataatgtcaacgaacaggagagcactctgggacaaaaacaagtagag
gacagagaagatgggatggagattgaagaaggtgaaatgggagatgacgaagcaccaaat
agttcttctattcccatagattacaacctgtataggaaattctggtctctgcaagacttc
ttcaggaatccggttcaatgctatgataaaagctcctggaaaacgttcctcaagttctct
gaagaagttctgcaagtgtttaagagttacaagctggacgatactcaagcatcacgaaaa
aaaattgaagaactgaaatctggaggagaacatgtttactttgccaagtttctgacaagt
gagaagttaatggatttgcaactaagtgacagcaactttcggcgacatattttgcttcag
tatctcatattgttccagtatttgaaaggacaagtgaagtttaaaagctcaaactatgtc
ttgatggatgatcagtctttgtggattgagaacaccaccaaacttgtttaccagttactg
tgtgaaactccatctgctggggacaaattttctaaaacaattgagcacatacttaacaca
gaagaaaactggaactcttggaagaatgaaggttgccccagttttgtgaaagaaaggcaa
cctgacaacaaacaattgaaaatggcacgaaaacggcaaggccctgaagactttctaggc
aagggttcaaacaaaaagatcctaatgggaaatgaggagttaaccaggctgtggaatctg
tgtcctgacaacatagaagcctgcaagtcagaaaccagggagtttatgccatctttggaa
cagttctttgaagaggcaatggaacaagcagatcctgaaaacatggttgaagatgaatac
aaagtggtaaataactccaattatggctggagagctctgaggcttctggcccgtagaagc
ccccatttcttccagcctaccaaccaacagtttaagagcttacctgaatatctggagaac
atggtgatcaagatagcaaaagaattgcctcccccttcagaggaaataaagactggagag
gatgaggatgatgaagataatgaatccctgttgaaggaaaacaatgaaagtccagaagtc
cagcagcagaaggtagtcactggtgatctcatcgagtctcttgctaacaagcttggagag
cagtggaagactttggcccctcacttagagatgaaagactcagacattcacagcattgaa
tctgacagtgaggatgtaaagatgagggctaaactcctgctggtcgcttggcaggatcga
gagggtgctcatgcaactgtcgaaaatctgaatgccgctttaagtcaggctcagctgagt
gacctggtggaaaacctgtgcagtgacagtgaaaacggaacataa
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