Halorubrum sodomense: J7656_01870
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Entry
J7656_01870 CDS
T07186
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hss
Halorubrum sodomense
Pathway
hss03022
Basal transcription factors
hss03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J7656_01870
09124 Replication and repair
03420 Nucleotide excision repair
J7656_01870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hss03021
]
J7656_01870
03400 DNA repair and recombination proteins [BR:
hss03400
]
J7656_01870
Enzymes [BR:
hss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
J7656_01870
Transcription machinery [BR:
hss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
J7656_01870
DNA repair and recombination proteins [BR:
hss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
J7656_01870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
SLFN-g3_helicase
ATPase
Zot
nSTAND3
AAA_30
GvpD_P-loop
AAA_34
AAA_11
AAA_25
Com_YlbF
DUF3435
TPR_MLP1_2
Motif
Other DBs
NCBI-ProteinID:
QUO48131
UniProt:
A0A8T8LNU7
LinkDB
All DBs
Position
395615..397840
Genome browser
AA seq
741 aa
AA seq
DB search
MSESPHLRFFPYEEPYPNQREAMDRVANALDRGQDVLFEGAPGTGKTLSALVPALEHARE
HDRTVVITTNVHQQMRQFVEDARAITREEPIRAVVFKGKSSMCHIDVDYQECQTLRDTTR
EMVETESEVRELESRQRELLAESREGDAGAAEAREAIMEELDELEAEVDEYETANVCEHY
RNNLTRDTDEFFSWLFDDVRTPDDVYEYADERELCGYELLKEGMEGVDLVVCNYHHLLDP
NIREQFFRWIDRDPSEIVTVFDEAHNIEDAARDHATRTLTENTLDAALDELADSDDSRAE
PAENVLRAFRDALVETYEDGLGFGGVDESWEDVSIANDDRRDDLTLAFLRNYEGKGIDTE
AELAVQLGQAIDEEYERRYRDGEATTRSESQTLAAARFVATWMDEGAEFGQYPVVSVRRD
AGTDEVYGRAELYTCIPRNVTSELFDEVAASVLMSATLRPFDVTEDVLGLEDVASMAYEM
GYPEANRRTFAADVPPLFASDRNDPETQEAVSSLLRDAIRFTPGNTLAFFPSYAEAERYH
ERLAGGSGRSAPSGGDARRGSEGGNDAPLGSIHLDGPGVDEERLRSEFVASDGAALFTSL
WGTLGEGVSFDGDDARTVVVVGVPYPHLSDRTEAVQDAYDRAFADRDRSRDPGWMYAVEI
PTIRKTRQALGRVIRGPDDFGVRILADRRYTTADMGKYSVRSAFPPEEREELLDVDPEKL
KFAMLNFYQDHDAYDGPPPSP
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagagtcgccgcacctgcggttcttcccgtacgaggaaccctacccgaaccagcgc
gaggcgatggacagggtcgccaacgcgctggaccggggccaggacgtgctgttcgagggc
gcgcccgggacggggaagaccctctccgcgctcgtgcccgcgctcgaacacgcccgcgag
cacgaccgcacggtcgtcatcacgaccaacgtccaccagcagatgcggcagttcgtcgag
gacgcgcgcgcgatcacccgcgaggagccgatccgcgcggtcgtcttcaaggggaagtcg
tcgatgtgccacatcgacgtcgactaccaggagtgtcagaccctccgggacaccacccgc
gagatggtggagacggagagcgaggtgcgcgagctggagtcgcgccagcgcgagctgctg
gcggagagccgcgagggtgacgcgggcgccgcggaggcgcgcgaggcgatcatggaggag
ctcgacgagctcgaggcggaagtcgacgagtacgagaccgccaacgtctgcgagcactac
cgcaacaacctcacccgcgacaccgacgagttcttctcgtggctcttcgacgacgtccgg
acgcccgacgacgtgtacgagtacgccgacgagcgcgagctgtgcggctacgagctgtta
aaagaggggatggagggggtcgacctcgtcgtctgcaactaccaccacctgctcgacccg
aacatccgcgagcagttcttccggtggatcgaccgcgacccgagcgagatagtcaccgtc
ttcgacgaggcgcacaacatcgaggacgccgcgcgcgaccacgccacccggacgctgacg
gagaacaccctcgacgccgcgctcgacgagctggccgacagcgacgactcccgcgcggag
cccgcggagaacgtcctccgcgccttccgcgacgccctcgtcgagacgtacgaggacggg
ctcgggttcggcggggtcgacgagagctgggaggacgtctcgatcgccaacgacgaccgc
cgcgacgacctcacgctggcgttcctccgcaactacgaggggaaggggatcgacacggag
gcggagctcgccgtccagctcggccaggcgatagacgaggagtacgagcgccgctaccgc
gacggggaggcgacgacccggtcggagtcgcagacgctcgcggccgcccggttcgtcgcg
acgtggatggacgagggcgcggagttcggccagtacccggtggtctccgtccggcgcgac
gcgggtactgacgaggtgtacggccgcgcggagctgtacacctgtatcccgcggaacgtc
accagcgagctgttcgacgaggtggccgcctccgtcctgatgagcgcgacgctgcgcccg
ttcgacgtgaccgaggacgtgctggggttagaggacgtcgcgtcgatggcctacgagatg
ggctaccccgaggcgaaccgccggaccttcgccgccgacgtgccgccgcttttcgcctcg
gaccgcaacgacccggagacgcaggaagcggtgtcgtcgctgctccgcgacgcgatccgg
ttcacgcccggcaacacgctcgccttcttcccctcgtacgccgaggccgagcgctaccac
gagcgtctcgccggtgggagcgggagaagcgccccgagcggcggcgacgcgagacgcggg
tcggagggagggaacgacgcccccctcggctcgatccacctcgacgggccgggcgtcgac
gaggagcgactccgcagcgagttcgtcgcaagcgacggcgccgcgctgttcacctcgctg
tgggggacgctcggcgagggggtgagcttcgacggcgacgacgcccgcacggtcgtcgtc
gtgggcgtcccgtacccgcacctctcggaccgcaccgaggcggttcaggacgcctacgac
cgggcgttcgcggaccgcgaccgctcccgcgacccggggtggatgtacgccgtcgagatc
ccgacgatccgcaagacgcgacaggcgctcggccgggtgatccgcggccccgacgacttc
ggcgtccggatcctcgcggaccgccgctacacgaccgccgacatggggaagtactcggtc
cgttccgccttcccgcccgaggagcgcgaggagctgctcgacgtcgaccccgagaagctg
aagttcgcgatgctgaacttctaccaagatcacgacgcgtacgacgggccgccgccgtca
ccgtga
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