Harpegnathos saltator (Jerdon's jumping ant): 105188642
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Entry
105188642 CDS
T03918
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105188642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hst03019
]
105188642
Messenger RNA biogenesis [BR:
hst03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105188642
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105188642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
DUF5817_CT
Motif
Other DBs
NCBI-GeneID:
105188642
NCBI-ProteinID:
XP_011148504
LinkDB
All DBs
Position
Unknown
AA seq
2408 aa
AA seq
DB search
MNLDSLSFTLSQISYLVANLSKRNFRESCEEISVLVQWTGLEADRHLLRCLFSYVDFSSS
ERSESNSKDYFQAQLLKQECVTLLSKPSLVSNLCFAIDHPLHHQKSLNPSSKFFANLKKT
LGLSLVQEVAFAIALYHSENTEIRALALEHTQKQLPELIKNYVNSETSNKHHEEGLHDSS
PEVLHLILSQVFHTTNPYNLLAEAKEKFLKNLRRDFPRELVPVVLAPLLYPGDGETPQFK
IELNMAVSQMDGNSLAELIMELGYSLTISVEECRSALAGLGAREITPACAARVLAHMART
CSNHEDTGGIQSFWGNSTATQDSSKEKPSETTAPTTWNVEVFVQALKEIQATLSWNEVIV
KLDHADFVIKDRQGLNLLITALKLGLQHQGYPPDMFPVELFYRHWDNVESQFSLIQQILK
CPEIFCFADYPYHSVTVDVLKAAPEGDSKEAQTWRSLNIVELLLYMAERGLYSPVQDLFK
WPIQHCPDVLVLALLQINQPLTILRQDLLSTLMPIFLGNHPNSAVILHHSWHANNSKIKT
IIMHAMADWYTRGDHDQTRLSRILDVAQDLKALSALLNAQSFPFVIDLACLASRREYLKL
EKWLSDKIRDHGEVFVNACVKFLQRRCPQVMGGSIKEDSTVPKASQLPQETLTTILACLQ
VCAGNVSQDCSEAIVTMVQNCSLMISKNVNRQPPPGVLRHRGLEQFNPATLGSQIFSSKQ
VDPLGNLSSSLASMGLGTGIGPPSTSAFNLPGALGPLVSAPGSPSQLMGPSPSPFPMLPL
TSQLHSGPVGTQGPSVLPGGTTIGGLGRLAPPTGIEKTRIQDVSNLFSEMTQPVAKEIED
EANSYFQRIYNHPPHPTLSIDEVLDMLKKFTSSTNRREREVFQCMMRNLFEEYKFFPQYP
EKELQITAQLFGGIIERGIIGHYLTLGMSLRFVLEALRKPEGSKMYYFGITALDRFKNRL
KDYGTYCEHVRSIPHYSEFPPHLMEYIEYGASHQEPPARSQGSKTVTTMLGAPVTTYKTM
TTTTITTSITQAKPSTTPTTSLSARPSIATATNIDTLLVATDKEEKITTPPEALQDKTAF
IFNNLSQLNLQQKCDELREVATEEYWPWMAQYLVMKRASIELNFHALYSNFLDCIKLPEL
NKMVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMMTLGRNKPILQVDIDLKSLL
VEAYHKGQQELLYVVPFVAKVLEACAKSRVFRPPNPWTMAIMNVLAELHQEPELKLNLKF
EIEVLCKTLTIDVAELKPVIYLKDPEKLRNIEYQLSQPNKKSEASNNQQQSQGPIEELVG
PTTSGAIVPQTAPPANTTPSLPTGPPEPRFNYMDISISGIANISSHITFNSQLPFFQAHP
HLKQFIRPAIERAIQEWIHPVVDRSMKIAITTSEQIVRKDFALDPEEMRMRTAARHMVRN
LTAGMAMITCRDQVRQDELLTSISANLKQSFHAAMIASTQQQKEVAEQAANLVAAENMEL
ACAFVQKTAMEKAIPEMDKRLLNEIELRKIARQEGRRYCDHLAKYQAERMPEQIRLKIGG
VTPQQMAVYEEFARNIPGFLPLSERDTQALFMPKPATDTTVTSYVANPAVAVATAQQVAA
YATASAVSNDEVGAMLEKLIAEVEILLSAMGPATPPSQHATLHSLLESIILTRRSRDAGT
AMTLLKKTVESLLDGPTISSGVIDSEVVLRYRDMHLRILKCLQDPRAYGMQWTNKHVTRC
LIESREEFRYNFEGVDCLIRSHLVSLPQYDVALAQAVEAGSALATAFAMQLVQLYLIDER
QTTHVTESDLFHTIEILARMAHHRAPPEGILLYRLTSLIDSLRANHDPGILVDRPPAGPT
AHIHSGILQVRARDFDDPPGLMDKTEYLLREWVSMYHNPTHARDPTKAFSIFVHQMNIHG
ILKTDDLITRFFKLSTQMCVDLCYRALAESAAAPSLVRAKCFHSLDAFVRLVALLVKHSG
DTTNTHTKINLLNKVLGIVAGVLLQDHEMRNTDFQQLPYHRIFIMLFLELCAPEPVLEAV
NYQVLMAYCHTLHILRPAKASGFCYAWLELVSHRVFIGRMLAITPQQKCWGMYAQLLIDL
FKYLAPYLRNAELAKPVTLLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNL
ILSAFPRNMRLPDPFTPNLKVDMLQEIAHAPRVLTNFASTIQPLTFKKELDSYLKARAPV
TFLSELRSNLQVSQEAGVRYNIQLMNALVLYVGTQAIAFIRSKGHAPNMSTIAHSAHMDI
FQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRVLLE
RLIVNRPHPWGLLITFIELIKNPTYKFWTHEFVHCAPEIEKWFDCLIKEVLTFDQIKDKP
IISTRYKH
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttactttgtcacaaatcagttatttggttgcgaatttg
agtaagagaaattttcgggagagctgtgaagagatatcggtcctggtgcagtggactggt
ctggaggcggaccgacatttgttgcgctgtttgttctcgtacgtcgatttttccagcagc
gagcggtcagagtccaactccaaggattacttccaagcacaattgttgaagcaggagtgt
gtcactttactgagtaaaccgtccttggtatcgaatttgtgttttgctatcgatcatcct
ttgcatcatcagaagtcattgaatccttcctccaagttttttgccaatttaaaaaagaca
cttgggttgagcttggtacaagaggttgctttcgcaatcgcgctatatcattcggaaaat
acagaaatccgtgcactagccttagaacatactcagaagcaactgcctgaactgataaaa
aactacgtaaactctgagactagcaacaaacaccacgaggaaggtctgcacgattcgtcg
cccgaggttcttcacctaatactcagtcaggtttttcatactaccaatccatacaacctt
ttggccgaagctaaggaaaaatttctcaagaacttacgacgcgattttccccgtgaactg
gtaccagtggtgctagcaccactcttgtatccaggagacggggaaactccacagttcaaa
attgagttgaacatggcggtcagtcaaatggatggcaactctctagcagagttgattatg
gaattaggctatagtcttaccattagcgtcgaagaatgtcgatctgcattagcaggttta
ggtgctagagaaataacaccagcatgcgctgcacgtgtgttggcgcatatggcacgtacc
tgtagtaatcacgaagacacaggaggaatacaatctttctggggtaattcgactgctact
caggattccagtaaggagaaaccatcggagactactgccccaacaacatggaacgtcgaa
gtgtttgttcaggccttaaaggagatacaagctacattatcgtggaacgaagttatcgtg
aaattggaccatgcagactttgtcatcaaagatagacaaggtttaaacttactgattaca
gctttaaagttgggtcttcaacatcaaggatatccacctgatatgtttcccgtcgagctt
ttttatcgccattgggacaacgtggagagtcagttctctctgatccagcaaattctgaag
tgccctgaaatattctgcttcgcagactatccatatcactcggtaaccgtagacgtatta
aaggcggcgcccgaaggggacagtaaagaggctcaaacgtggagatcgctcaacatagtg
gagttgcttttgtacatggcggaaagaggattgtattccccggtgcaggatctatttaaa
tggcccattcagcattgcccggacgtgctcgtgttggcgttactgcagatcaatcaaccg
ctcacgatattgagacaagatctactcagcacgctaatgcccatttttctgggcaatcat
cctaactcggccgtgatattacatcactcttggcatgcgaataactccaagataaagaca
attattatgcacgccatggctgattggtatacgcgcggtgaccatgatcaaacgagatta
tcgcgcatcttggatgtcgcacaagatctcaaagcgctgtcggcgctattgaacgcacaa
tcgttcccattcgtcatcgatcttgcgtgtctggcatctcggcgagaatatctgaaatta
gaaaagtggctgtcggataagatcagagaccatggagaagtgtttgtcaacgcatgcgtg
aagtttctccagagacgttgcccgcaggttatgggtggcagcatcaaagaggattctaca
gtacccaaagcaagccaattaccgcaggagacgcttactacgatactcgcttgtttgcaa
gtttgtgctggaaacgtttcccaagattgctcggaggcgatagtgacgatggttcaaaac
tgcagtctgatgataagtaagaatgtaaacagacagcctccacctggagttttgagacat
cgaggattggaacagtttaatccggccactttaggcagtcagatattttcctctaagcaa
gtggatcctttgggtaatttaagttcgagtctcgcatccatgggtcttggtactggtatc
ggaccaccaagtacttccgccttcaacttacccggcgcactggggcctctagtttcagcg
cctggatctccttcacaactcatgggaccttctccaagtccctttccgatgttgccttta
acgtcgcagttacattcgggtccagttggcactcagggcccgtctgtgctacccggtggt
acgaccatcggcggattaggacgccttgcaccgccaactggtatcgagaaaacgaggatt
caggatgtctcgaacttattttcggaaatgacacaaccggtggccaaagaaattgaagat
gaagcgaacagctattttcaacggatatacaatcatccgccgcatccgaccttgtcgatc
gacgaagtactagatatgttgaagaagtttacatcatctaccaataggagagagagggag
gtgttccagtgcatgatgcggaatctattcgaagagtacaaatttttcccacaatatccc
gagaaagaattacagattacggcccaactgttcggtgggatcatcgagcgtggcattatc
ggtcattacttaacgctcgggatgtcattgaggttcgtcttggaagcgcttaggaaaccg
gaaggcagcaaaatgtactatttcggtataacggctctggatcgctttaagaatcgcttg
aaagactatggaacgtattgcgaacatgtccgtagtattccgcattatagcgagttccca
ccgcacttaatggagtacatcgagtatggagcaagccaccaagaacctccagcgagatca
caaggctccaagactgtcacgactatgttgggggcgccagtcacgacgtacaagactatg
actacgactactattacaactagtatcacgcaggcgaaaccatctacgacgccgacgacg
tctctttcagccagaccctccattgcgaccgcaactaacatcgatactttgcttgtggca
actgacaaggaggagaagatcacgacaccgccggaagccttgcaggacaaaacggcattt
attttcaataatcttagccagttgaatctgcagcagaaatgtgacgagcttcgcgaggtt
gccacggaggaatattggccgtggatggcgcagtacttggtgatgaaacgtgctagtata
gaactgaactttcacgctctgtattcgaattttcttgattgtataaaattacccgaactc
aacaagatggtcaccagagaaacatttcgtaatatcaaggtactcctgcgtagtgacaag
ggtatagctaatttttcggatagatcgcttctgaagaatttaggacattggcttggtatg
atgacacttggcaggaataaacccatcttacaggtagatatagatctgaaaagtttactt
gtcgaggcatatcataaagggcagcaggaacttctttatgtggtaccttttgtcgcaaaa
gtgctcgaagcttgcgcgaaaagtcgcgtttttcgtccacctaatccctggaccatggca
attatgaatgtcctagctgaacttcatcaggaacctgagttgaaattgaatttgaagttt
gagattgaagttctctgcaaaactctaactatcgatgttgcggaattgaaaccggtcatc
tacttgaaagatcccgaaaaattgcgcaacatcgagtatcaattgtcgcagccaaataaa
aaatctgaagcttcgaataatcaacagcagtctcagggtcctatagaagaactggtaggt
ccgacaactagtggtgccattgtccctcagactgctcctcctgcgaatacgacaccttcg
ttaccaactggtccgcctgaaccgcgatttaattacatggatatatctatatctggcatc
gctaacatatcttcacatattactttcaacagtcaattacctttttttcaagcgcatccg
catctgaagcaatttattcgtccagcgatcgaacgagcgattcaggaatggattcacccg
gtcgtcgatcgttcgatgaagattgctataacgaccagcgaacaaatcgtaagaaaagac
tttgcgttggacccggaagaaatgcgaatgcgaacagcagcacgtcatatggtgcgcaat
ctgaccgctggcatggctatgatcacgtgtcgcgatcaggtaagacaagacgagctccta
acatcgatcagcgcgaacctgaaacaatcattccacgcggcgatgatcgcctcgactcag
cagcagaaagaagtcgctgaacaagcggcaaacttagtcgctgccgagaacatggagctt
gcatgcgccttcgtacagaagactgctatggagaaagcgataccggaaatggataaacgg
ctcttgaacgagatagagttgcgtaagattgctcgacaagaaggaagaagatattgtgat
cacctcgccaaataccaagcggagagaatgccagaacaaattagactgaagattggcggt
gtcacgccacaacagatggcggtttatgaggaatttgccaggaacattccaggattcctc
ccactatctgaacgagatacacaagccctcttcatgccaaaacctgctaccgataccact
gttacctcctatgttgcaaatccggctgtggcagttgcaacggcgcagcaagtcgctgcc
tatgcaacggcatcggcggtcagcaatgatgaagtcggtgctatgctggagaaactcatc
gctgaagtggagattttattgagtgctatgggtcccgcgacacctccttctcaacatgct
actcttcacagtcttcttgagtcgatcattcttactagacgatcgagagacgctggtaca
gcaatgacacttttgaagaagactgtcgaaagcctactagatggtcctacgatctctagt
ggtgtcatcgattcagaggttgtgttgcgatacagagacatgcacttacgcattctgaag
tgtcttcaagatccacgcgcctatggtatgcagtggactaataaacacgttactcgttgt
ttaatcgaaagcagagaggaatttcgatataacttcgaaggtgtagactgtcttataagg
tctcatctagttagtcttcctcaatatgacgtagcattggcgcaagccgtggaagcagga
agcgccttggcaacagcatttgctatgcaactggttcaactatatttgatcgacgagaga
cagacaactcatgttacggaatctgatttgtttcacacgatcgagatactcgctcgcatg
gctcatcacagagctccgccagagggtatcttgctttaccgacttacaagcctaatagat
tctttgcgcgccaatcacgaccccggtatattggtagatagacctcctgctggaccgacc
gcgcacattcactctggaatcctgcaggtgagagctcgcgatttcgacgatccacccgga
ttgatggacaaaacggagtatctgttgcgcgagtgggtctccatgtaccacaatcctacg
cacgcgcgcgatcccacgaaggcgttcagcatcttcgtgcaccaaatgaacattcatggt
atcctcaagactgacgacctcatcacccgattcttcaaactgagtacccagatgtgcgtc
gatctttgttatcgtgctctcgctgagtctgccgcggcaccgtcgctcgttcgcgctaaa
tgcttccactcgttggacgcgttcgtgcgtcttgtcgcgctgttggtgaagcactcgggc
gacaccaccaatacgcacaccaagatcaacctcttgaacaaagtgctcggtatcgttgcc
ggtgtgctgctgcaagatcacgaaatgcgcaatactgactttcagcagttgccatatcac
agaatcttcatcatgctgtttttggaattgtgtgcgcccgagcctgtgttggaggccgtg
aactatcaagtactgatggcctactgtcatacgctgcacatactgcgcccagcgaaggcg
tctggtttctgctacgcttggctggaactggtctcgcaccgggtgttcatcggccgtatg
ctggccattacgccgcagcagaagtgctggggcatgtacgcgcaattgctcatagatctg
ttcaaatacctcgcgccctatctacgcaacgctgagctcgccaagcctgtgactctcctg
tacaagggcacgctccgtgtgttgctggtgttgctgcacgacttcccggagttcctgtgc
gactatcactatggattttgcgacgtgataccgcccaactgcatacagatgagaaatctc
attctgagcgcatttcctagaaacatgcgcctgcccgatccattcacgccaaatcttaag
gtcgacatgctgcaggagattgcgcacgcaccgcgagtcctcacaaattttgcgtctacg
atacagccattaacattcaagaaggagctagattcttatctgaaggctcgcgcgccggtc
accttcttgtccgagttgcgcagcaatttgcaggtatcgcaagaggctggagtacgttac
aatattcaactgatgaacgcgttggtgttgtacgtgggcacgcaagctatcgcgttcatt
cgcagcaaaggccacgcgcccaacatgtccacgattgcgcattccgcgcacatggacatc
ttccagaatctggctgtcgacctcgacacagagggccggtatttgtttttgaacgctata
gcgaaccagctgcgatatcccaatagtcacacacattacttcagctgtacgctcctttat
ctgttcgccgaagcgaacacagaagcgatacaagaacagatcaccagggttctcctcgag
aggctcatcgtcaacagaccacacccgtggggccttctcatcaccttcatcgagctcatc
aagaacccgacatataaattttggacgcacgaatttgtacattgcgcgcctgaaatcgag
aagtggtttgactgtttgatcaaggaggttctaacgtttgaccagataaaagataaacct
ataataagcacacgatacaaacattaa
DBGET
integrated database retrieval system
