Hydractinia symbiolongicarpus: 130625919
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Entry
130625919 CDS
T09218
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04080
Neuroactive ligand-receptor interaction
hsy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130625919
04082 Neuroactive ligand signaling
130625919
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsy04040
]
130625919
Ion channels [BR:
hsy04040
]
Ligand-gated channels
GABA-A
130625919
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Tmemb_9
Motif
Other DBs
NCBI-GeneID:
130625919
NCBI-ProteinID:
XP_057297027
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All DBs
Position
14:3583498..3590252
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AA seq
487 aa
AA seq
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MHLLYFILLLSIVRGHRPGSSNYMEKELQTKSPSQNVTHKERKINATDLSKLYNRVMKSY
DKKFRAGYGENATLVKLELQVLSFSKLNEGAMEFEMDFYFAQFWDDYRFKVHKTREEALI
NLVGKNVEELWLPDTVFINSKESKYHDVTVNNRFLSVNLSNGNVVYHARITTKASCLMDL
RDYPFDKQTCFLAIESYGHNKSQILYAWQSYDQDKCVGECTNISVYDKQMSNFDVIEAMK
STNKTPYHAAQYSSATAQFTFKRRSKYFLIQVYLPCVLIVMVTWTTFWITPSAVPARSAI
CVTTILTLITMLGIVNVNMPKVSYIKALDLYLFVSFIFVFLSLLEYILVLNFANYFLKKE
EGREEEEGKEKYPTQKAWNSTSDTNSYCSSSKKAKLRMRRSYADNFRPSCKNTIIDLETE
YFFGELRKRTPDTIEHKIKNSIQGELTWESSRTDKVARFLFPLAFICFNIGYCVKYLIKN
KMHENTL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttctttattttatattactattatcaattgtcagaggtcatcgcccaggaagt
agtaattacatggaaaaagaacttcaaacaaaatctccatcacaaaatgtcacacataag
gaacgcaaaataaacgctacagatttgtcgaaattgtataatcgagtcatgaagtcatac
gataaaaagtttcgagcaggatatggagaaaatgcaactttagtaaagctggaacttcaa
gtactatcattcagcaaactcaacgaaggagcaatggaatttgaaatggacttttacttc
gctcaattttgggacgattaccgatttaaagttcacaaaactcgtgaagaagctctgata
aacttagtagggaaaaatgttgaagagttatggttacctgacacagtattcatcaattct
aaagaatcaaagtaccatgacgtgacagtaaataatagatttttatcagtgaatttgagc
aatggcaatgtggtttaccacgcgcggataacaacaaaagcatcgtgtttaatggatttg
cgagactatccgtttgacaaacagacttgctttttggctatagaaagttatggtcacaat
aaaagtcaaattctttatgcatggcaaagttacgaccaagacaaatgcgtcggggaatgt
acaaacataagtgtttacgacaaacaaatgtctaattttgatgtgatagaagctatgaag
tcaaccaataaaacgccctaccatgctgcgcaatactcaagtgctacagctcagtttaca
tttaaacggcgttcaaaatactttttaatacaagtttacttaccgtgtgttttgattgtc
atggtaacatggacaacattttggatcactccatctgcagtgcctgctcgttctgcaatc
tgtgtgacgactatactaaccttgatcacaatgctaggcatcgtaaatgtaaacatgccg
aaagtgagctacatcaaagctttggatttgtatttgtttgtgtcctttatatttgttttc
ttgtccttattggaatacattctggtcttaaattttgcaaattactttcttaaaaaggaa
gaaggaagagaagaagaagaaggaaaggaaaaatacccaacacaaaaggcgtggaacagc
acgtcggataccaacagttattgctccagttcaaaaaaagcgaaattgagaatgcgaaga
agttatgcagataatttcaggccatcctgcaaaaataccataatagatctggaaacagag
tatttctttggtgaattaaggaaacgcactcctgacacgattgaacataaaataaagaat
tcaattcaaggtgaattaacgtgggaatcatcaagaacggataaagttgcacgtttcctt
tttcctttggcgttcatctgctttaatataggatattgtgtaaaataccttataaaaaac
aagatgcatgaaaatacgttgtaa
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