Hibiscus syriacus (Rose-of-Sharon): 120116516
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Entry
120116516 CDS
T09559
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120116516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsyr03000
]
120116516
Transcription factors [BR:
hsyr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
120116516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Pik1
Motif
Other DBs
NCBI-GeneID:
120116516
NCBI-ProteinID:
XP_038992920
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MDNNLCEFFEELEHVGEDDLFSIFESLDGLAESFQFPFTPFEEMAAAGCTPKSASSSAQM
ESETEETSPKSKRQKVVTNLDGPQRMSHINIERNRRKQMNEHLTVLRSLMPCFYVKRGDQ
ASIIGGVVDYINELQQVLQSLEAKKQRKVYSEVLSPRLVLSPRSSALSPRKPPLSPRLNL
PISPRTPLPGSPYKPMLQKSYLSPTVVSTSVEQSPASSTSSVDNNELVAKSKSPIADVEV
KFSGPNLVLKTVSPRIPGQALKIISALEELSLEILNVNINTVDEIMLNSFTIKIGIECQL
SAEELAHQIQQTFGHC
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggataataatttgtgtgagtttttcgaagaactcgagcacgtcggtgaagatgatttg
ttcagtatttttgagagtttagatgggctggctgagtcgtttcagtttcccttcactccg
tttgaagaaatggctgctgctggttgtacaccaaaatctgcttcctcgagtgctcaaatg
gagtccgaaaccgaggaaacttcacccaaaagcaagaggcagaaggtagtgacgaacctc
gatggtcctcaaaggatgtcgcatattaacatcgaacgcaaccggaggaagcaaatgaac
gagcatttaaccgtgctcagatcgttgatgccttgcttctacgtcaaaagaggggatcaa
gcgtcgattattgggggcgtggtggattacatcaatgagttgcaacaagttctacaatct
ctagaggccaagaaacaaaggaaagtttacagcgaagtgttgagtccaagattggtttta
agtccgagatcgtcggctctcagccctcggaagcctcctctaagtccgaggctaaacttg
ccgataagcccgagaacccctctgcccggtagcccttacaagccgatgttgcaaaagagt
tatctgtctccgactgtggttagtacttcggtcgaacagtcaccggcttcctccacttcc
tccgttgacaacaatgagctcgtcgcgaaatcaaagtccccgatcgccgacgtggaagtt
aagttttcgggcccgaatctagttttgaagacggtatctcctcggattcctggtcaagct
ctgaaaataatatcggctcttgaggaactctcactcgaaatcctcaatgtcaacattaac
accgttgatgaaatcatgcttaattccttcacaatcaagattgggattgaatgccagttg
agtgctgaagaactcgcccaccagatccagcaaacattcggccattgctag
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