Hibiscus syriacus (Rose-of-Sharon): 120124844
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Entry
120124844 CDS
T09559
Name
(RefSeq) probable pectate lyase 18 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120124844
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120124844
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120124844
NCBI-ProteinID:
XP_038999349
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All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MAVPSLSLSLLLLFTIALFFPFLISSSPVQDPELVVQDVHRAINASRRNLGYLSCGTGNP
IDDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGDDDAVNPKPGTLRHAV
IQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGSSVHIAGGPCITIQFVTNIIIHGLNI
HDCKQGGNAMVRDSPRHFGWRTISDGDGISIFGGSHVWVDHNSLSNCNDGLIDAIHGSTA
ITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND
YTHWEMYAIGGSANPTINSQGNRFTAPDNRFSKEVTKHEDAPESDWKSWNWRSEGDLMVN
GAFFTPSGVGSSSSYAKASSLGARPSSLVATITTNAGALSCKKGARC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcccttcactttccctttcccttctcttactcttcacaatcgctctatttttc
ccattcctcatttcctcttcccctgttcaagaccctgagcttgtagtccaagatgttcac
agagctatcaatgcgtctaggaggaaccttgggtatctgtcgtgtggaaccgggaacccc
attgacgactgctggaggtgtgaccccaactgggagaagaaccgccagaggctagccgat
tgtgccattgggttcggcaagaacgccattggtggaagagatggtaagatttacgttgtt
accgattcgggcgacgacgacgcggttaacccgaagcccgggactttacgacatgctgtg
attcaagacgaaccgttgtggataattttcgctcgtgacatgaccatccagctgaaagaa
gagctgataatgaactctttcaagaccatcgacggcaggggctccagtgttcacattgcc
ggtggtccatgcattaccattcagttcgtcaccaacatcatcatccacggactcaacata
catgattgtaaacaaggagggaatgctatggtgagggactccccgcggcactttggttgg
aggacgatatcggacggtgacggtatttccatctttggcggtagccacgtctgggtcgat
cataactcgttatcaaactgcaacgatggtctgatagatgccatccacgggtccaccgcg
attaccatctccaataactacatgactcaccacgataaagtcatgttattggggcacagt
gactcctatactcaagacaagaacatgcaagtcaccattgcttttaaccactttggtgaa
ggccttgtccaaagaatgccaagatgtagacatgggtatttccatgtggtgaacaatgac
tacacccattgggaaatgtatgccatcggaggaagtgcaaacccaacaataaacagccaa
gggaacagatttactgcacctgataacagattcagcaaagaggtgacgaagcacgaagat
gcaccggagagtgattggaagagctggaattggagatctgaaggtgacctaatggtgaac
ggagcattctttacaccttccggcgtggggtcgtcgtccagctacgccaaggcttcgagc
ttgggagctaggccatcatcacttgtcgcaaccattacaaccaatgccggtgcacttagt
tgcaagaaaggtgcacgttgctga
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