Hibiscus syriacus (Rose-of-Sharon): 120133232
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Entry
120133232 CDS
T09559
Name
(RefSeq) probable pectate lyase 20
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120133232
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120133232
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120133232
NCBI-ProteinID:
XP_039005792
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MIERKGESTMGISHSCFSSFTLLLILLFVCVSATAQKTELNSRLAEGNKLQDLNKSSMAH
QFDDEKWRNEHAVENPEEIASMVDMSIKNSTVRRNLGYFSCGSGNPIDDCWRCDRLWYRR
RRRLANCAIGFGRNAVGGRDGRYYVVTDSGDDDPVNPKPGTLRHAVIQDRPLWIVFKRDM
VITLKQELIMNSFKTIDARGVNVHIAYGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSS
PSHYGWRTMADGDGISIFGASHIWIDHNSLSNCADGLIDAVMGSTAITISNNYFTHHNEV
MLLGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAD
PTINSQGNRFLAPNNPFAKEVTKREGGWNGEWKQWNWRSEGDLLLNGAYFTPSGVGAAAS
YARASSLGAKLSSLVSIITSNAGALACINGRMC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagagaaagggagaatcaacaatggggatttctcacagctgcttctcttcattc
acattgctactcattctgttgttcgtttgtgtcagtgccacagcccagaaaacagagctg
aattcgaggcttgctgagggaaacaaattgcaggatttaaacaagtcatcaatggcacac
cagttcgatgatgagaaatggagaaatgagcatgctgtggagaatccagaggaaattgct
tcaatggttgatatgagcataaaaaatagtaccgtgaggagaaacttgggatatttctcg
tgcggatcagggaatccgatcgatgactgttggcggtgtgaccggctatggtatcgtagg
cggagacgccttgcgaactgtgccatcgggttcggacgcaatgccgtcggtggtcgtgat
ggaaggtactacgttgtgactgactctggtgatgatgaccctgtgaaccctaagccaggg
accctgcgccatgctgttatccaagacaggcctctttggatcgtgttcaagcgtgacatg
gtgatcacgttgaagcaggagctgatcatgaacagttttaagacgattgacgctcgtggt
gtcaatgttcatatcgcttacggtgcctgcatcaccatccagtttgtcaccaacattatc
atccatggactccacattcatgactgcaagcccacagggaatgccatggttcgaagctcc
ccgtctcattatggatggagaaccatggcggatggggatggcatttcgatcttcggtgcg
agccatatctggatcgaccacaactcactgtctaattgtgctgatggacttatcgatgca
gtaatgggatccacagcaattacaatctcgaacaactacttcactcatcacaatgaggtt
atgctattgggacatagtgattcttatgtaagagacaagcagatgcaagtcaccattgct
tataaccacttcggtgagggtcttatccaacgaatgccgaggtgtcgacacggatatttc
catgtagtgaacaatgactatacacattgggaaatgtatgcaattggcggaagcgccgat
cccaccattaacagccaaggcaaccgtttccttgcccctaataacccctttgccaaggag
gttacaaagagagaaggcggatggaatggtgaatggaaacaatggaattggagatcggaa
ggagatctgttgttaaacggagcatatttcactccatcaggtgtaggagcagctgctagc
tatgccagggcctcgagcttaggtgccaaattgtcttccttggtcagcatcattacttca
aatgcaggagctcttgcctgcatcaatggccgaatgtgttaa
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