KEGG   Hibiscus syriacus (Rose-of-Sharon): 120134980
Entry
120134980         CDS       T09559                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120134980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsyr03041]
    120134980
Spliceosome [BR:hsyr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120134980
 Complex B
    120134980
 Complex C
   U2 SnRNP specific factors
    120134980
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N LLPH Vesi_VP2
Other DBs
NCBI-GeneID: 120134980
NCBI-ProteinID: XP_039007282
LinkDB
Position
Unknown
AA seq 509 aa
MSSTLLELNRAAHEDVERLERLIVKDLQNDPPTSKDRLYQSHRVRNNIDTIIATTEKLVE
IYEDKDSSRKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPAARVVDANEEYEALL
KEEPVIEFSGEEAFGRYLDLHELFNQYINSKFGAKIEYSAYLDIFSQPHNIPWKLKSTRQ
YREYMENLLEYLIYFFQRTEPLQDLDRIFSKVEVEFEEQWANGQVQGWEKQGPENEDDPM
HHAVIDLDYYSTVEELMEVGPEKLKEALAALGLKTGGTVQQRAERLFLTKHTPLDKLDKK
HFAKGSHGPRQNGSAAVSQDINSLKHVALMEAKMKKLCDLLTKTIEQTKENVVKKQALTY
EEMEQEREEEETQVDTESDDEDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITNIEEAQELWEKIRERQGVNKWR
PDLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgactctactcgagctgaatcgggctgctcacgaagatgtagaacgtcttgag
cggctcatcgtgaaggacctgcaaaatgatccacctacctccaaagaccgattatatcaa
agccaccgtgtccgcaataatatcgacacaatcatcgcaaccaccgagaagctggttgag
atatatgaagataaagatagttctaggaaagatgaaatcgcggctctcggaggtcaaaca
gctaccggaattaatgtctttagtgctttttatgatagattgaaggagatacgtgagtac
catagaaagcaccccgctgcacgtgtcgtcgatgctaatgaagagtatgaggctttactt
aaggaggaaccagtcattgagttcagcggagaggaagcctttggtcggtatctggatctg
catgaattgttcaatcagtacattaattcaaaatttggagccaaaattgaatactcggct
tacctggatatcttttcacagccacacaatatcccttggaaactgaagtcaacaaggcaa
tacagggagtacatggagaatttgttggagtatctaatttacttctttcagaggactgaa
ccactacaagatcttgacagaatcttttccaaggttgaggttgagtttgaggagcagtgg
gctaatggccaggtacaaggatgggagaaacaaggtccggaaaatgaagatgatcctatg
catcatgcagtgattgatctagattattacagcacagttgaagagttgatggaagtggga
ccagaaaagttaaaggaggcattggcagcattaggactaaaaactggtggtaccgttcag
cagcgcgccgagaggcttttcctcaccaagcatacacctttggacaagctggacaagaaa
cattttgcaaaaggctcacatggacctcgacaaaatggatccgctgcagtttcacaggac
attaacagtctgaaacatgttgcattgatggaagccaagatgaagaaactctgtgattta
ctgactaagacaatcgaacaaacaaaagaaaatgtggtaaagaagcaagctttgacatac
gaggaaatggaacaagaacgtgaagaggaagagacacaagtggacactgaaagtgatgat
gaagatcaacagatctataatcctcttaaattgccaatgggttgggatggaaagcctata
ccttactggctttacaaacttcatggccttggtcaggaatttaagtgcgagatttgtggg
aactatagctactggggtcgacgggctttcgagaggcatttcaaagaatggcggcatcag
catggcatgcgatgccttggtattcctaacaccaagaacttcaatgaaatcaccaatatt
gaggaagctcaagaactgtgggagaagataagagaacggcaaggagtgaacaagtggcgg
cccgatcttgaagaggaatacgaagataaagagggtaacatctataacaagaagacatat
accgatttgcagcggcaggggctgatttaa

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