Hibiscus syriacus (Rose-of-Sharon): 120137438
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Entry
120137438 CDS
T09559
Name
(RefSeq) probable pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120137438
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120137438
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
KxYKxGKxW_sig
Motif
Other DBs
NCBI-GeneID:
120137438
NCBI-ProteinID:
XP_039009116
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All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MTVSKKWVFASLAVLFLFLTGATATLRTNGSSSNVETEMQQSSKNSTMAARWNEHAVDDP
EAVAAEVQASIYMNIRNVTERRELGYFSCGTGNPIDDCWRCDPNWQKNRKRLADCSIGFG
RNAIGGRDGRFYVVTDPNDDDPVNPKPGTLRHAVIQEQPLWVVFKRDMVIKLKQELLVNS
FKTIDGRGVNVHIANGACITIQFVTNVIVHGLHIHDCKPTGNAMVRSSPSHFGWRTMADG
DAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRD
KQMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAA
PTNPFAKEVTKRVDTAQGQWKSWNWRSEGDLLLNGAYFTPSGAGASASYARASSLGAKSS
AMVGAITSNAGALPCRRGRQC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgacagtttccaagaaatgggtctttgcttctttagctgttctgtttttgtttcttact
ggagcaacggccactctacggacaaacggatcttccagcaatgtggagacggagatgcag
cagagctcaaaaaactcaacaatggcagctaggtggaatgagcatgcggtggatgatcca
gaggccgttgcagccgaggtccaggccagcatctacatgaacattcgaaatgtgactgag
aggagggagttggggtacttctcctgcggaactggtaaccccattgatgactgctggcgt
tgtgaccccaactggcaaaagaaccggaagagacttgccgactgcagcatcggtttcgga
aggaacgcgataggtgggcgtgatggacgcttctatgtcgtcactgaccctaatgatgat
gaccctgttaaccccaagcccgggaccttgcgtcatgctgtgatccaggagcagcccctt
tgggttgtgttcaagagggacatggttatcaagttgaagcaggagttgcttgtcaacagc
tttaagaccatcgatggtcgtggggtgaatgttcatattgctaacggggcatgtatcacc
atccagttcgttaccaatgtgattgttcatggtctccatattcatgactgtaagcccaca
ggcaatgccatggtgagaagctcaccctctcacttcggttggaggacgatggccgacgga
gatgcgatttccatctttggctcgagtcacatctgggtcgaccacaattctctctctaat
tgtgccgatggtcttgttgatgctgtcatggggtcaaccgccattaccatctccaacaac
cacatgacccaccacaacgaggtgatgttgctgggtcacagcgactcttacacaagggac
aagcagatgcaagtgaccatcgcctacaaccatttcggagaggggctagtacagagaatg
ccaaggtgtaggcatgggtatttccatgtggtaaacaacgactacactcactgggaaatg
tatgccattggtggaagtgcaaatcctaccataaacagccagggtaacagatacgcagct
ccgacgaatccattcgcaaaggaggtgaccaagagggtggatactgctcaaggccagtgg
aagagctggaactggaggtcagaaggggacctgcttctaaatggtgcatatttcactccg
tccggtgctggagcctcagccagctatgccagggcctcaagcttgggggccaagtcctcc
gccatggttggggccatcacttccaatgccggtgctctaccctgccgccgaggcaggcaa
tgctag
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