Hibiscus syriacus (Rose-of-Sharon): 120148065
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Entry
120148065 CDS
T09559
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120148065
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120148065
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120148065
NCBI-ProteinID:
XP_039017187
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MAIPLLSLFFFTSLPFISPSLVKDPELIVQDLYRAINVSRRSLRHASCGTGNPIDDCWRC
DSHWWKNRRRLANCAIGFGKNAIGGRDGKLYIVTDSSDDDPVNPKPETLRHAVIQDEPLW
IIFARDMTIKLKEELIMNSFKTIDGRGADVHIAGGPCITIQFVTNIIIHGLNIHDCKQGG
NAMVRDSPRHYGWRTTSDGDGISIFGGSHIWVDHNSLSNCKDGLIDAIYGSTAITISNNY
MSHHDKVMLLGHSDFYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWKMY
AIGGSANPTINSQGNRFTAPNNIFSKEVTKHEDAPKSEWKRWNWRSKDDLMMNGAFFTPS
GAIVSSSYAQASSLGARPSSHVATITTDAGALNCKKNSYC
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcctttactttctcttttcttcttcacctctcttcctttcatttccccatcc
ctagttaaagaccctgagctcatagttcaagatctttacagggccattaatgtctctagg
aggagccttaggcatgcctcttgtggcactggaaaccctatagatgactgctggagatgt
gactctcactggtggaagaatcgacgaaggctagccaattgtgcaattgggttcggaaag
aatgccatcggtggaagagatggtaaactatacattgtcaccgattccagcgatgatgat
cctgtaaaccctaaacccgaaactttaagacacgctgtgatccaagacgaaccgttgtgg
atcattttcgctcgtgatatgaccataaaattgaaagaagaactcatcatgaactctttc
aagacaatcgatggacgaggtgccgatgttcacatcgccgggggtccgtgcattaccatc
cagtttgtcaccaacattattatccatggattgaacattcatgattgtaaacaaggaggg
aatgctatggtgagggactcccctcgacactacggttggcggaccacatcagacggtgac
gggatttccatatttggcggtagtcatatttgggtggatcataactctttatcaaactgc
aaggatggactgattgatgccatttacgggtccactgccatcaccatatcaaataactac
atgagtcaccatgataaagtcatgttgttagggcacagtgatttctacactcgagacaag
aacatgcaagtcactatagcttttaaccactttggtgaagggcttgtccaaagaatgcca
aggtgtagacatggttatttccatgtggtgaacaatgattacacccattggaaaatgtat
gctataggagggagtgctaatccaaccatcaatagccaggggaatagatttactgcacca
aataacatattcagcaaagaggtgaccaagcatgaagatgcaccgaagagcgaatggaag
cgatggaattggagatcaaaagacgacctaatgatgaatggcgcgtttttcacaccgtcg
ggtgccattgtgtcatcgagttacgcccaggcctctagcttgggtgctaggccatcatca
catgtcgctacgataacgaccgatgccggtgctctcaattgtaagaaaaactcttattgt
tga
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