Hibiscus syriacus (Rose-of-Sharon): 120149412
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Entry
120149412 CDS
T09559
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120149412
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120149412
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
BgaA-like_CBM
Motif
Other DBs
NCBI-GeneID:
120149412
NCBI-ProteinID:
XP_039018137
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All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MATPLSLFLLFLPFLAPSSIFSATFLVQDTEQVVQQVSESIRNATIARRNLGFFSCKTGN
PIDDCWRCDPNWAKNRKRLADCAIGFGKRAIGGRNGRYYVVTDPSDSDPVNPRPGTLRHA
VIQDRPLWIVFARDMVIKLKVELLMNSFKTIDGRGVNVHIAGGPCITIQYVTNIIIHGIN
IHDCKRGGNLYVRDSPRHYGWRTISDGDGVSIFGGSHIWVDHCSLSNCNDGLIDAIHGST
AITISNNYMTHHNKVMLLGHSDTYTQDKNMQITIAFNHFGEGLVQRMPRCRHGYFHVVNN
DYTHWKMYAIDGSANPTINSQGNRFLAPDNKNSKEVTKHEDAPRRRWKNWNWRSSGDLML
NGAFFRQTGTTASSVYAKASSLSARPSSLVSSLTSGAGVLVCKKGRSC
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccattgtccctctttcttcttttcttgcctttcttggctccatcctccatt
ttctcggccacttttctagttcaagacactgagcaggttgttcaacaagtcagcgagagc
ataaggaatgctactatagctaggaggaacctgggatttttctcgtgtaaaaccggtaat
ccgatcgatgactgttggcggtgcgatcctaattgggcgaagaaccgtaagaggctagcc
gactgcgccattgggttcggtaagcgtgccattggtggacggaacgggagatattacgtt
gtgacagatccgagtgacagtgatccggtcaaccctagacccggcacccttaggcatgct
gttatccaagacagaccgttgtggatcgttttcgctcgtgacatggtgatcaagttgaag
gtcgagttgttgatgaactcgtttaagacaatcgatggccgaggcgtcaacgttcacatc
gctggggggccgtgcattactatacagtacgtgaccaatattataatccatgggattaac
atacatgattgtaagagaggtgggaatctttatgtgagggactctcctaggcattatggt
tggagaactatatccgacggagacggcgtgtcgatattcggaggcagccacatttgggtg
gaccattgctcgttgtctaattgcaacgacggacttatcgacgccatccacggatcgacg
gcaatcaccatttctaacaattacatgacccatcataacaaagtcatgttgttaggccac
agtgacacttacacgcaagacaagaacatgcagatcaccattgccttcaaccactttgga
gaagggcttgtgcaaagaatgcctagatgcaggcacggatattttcacgtcgtgaacaac
gattatacgcattggaaaatgtatgccatcgacggaagtgctaaccctaccatcaatagc
cagggaaacagatttcttgcaccagataataagaatagtaaagaagtgactaaacacgag
gatgcaccaaggagaagatggaagaattggaattggaggtcaagtggggatttgatgttg
aacggagcgttcttcagacaaaccggcaccactgcgtcgtcagtttatgcaaaggcgtcg
agcctgagtgctagaccgtcttctctcgtcagctcactaacgtccggagccggtgtactg
gtttgcaagaaggggcgaagctgctag
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