Hibiscus syriacus (Rose-of-Sharon): 120149747
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Entry
120149747 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120149747
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120149747
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120149747
NCBI-ProteinID:
XP_039018392
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
KLGSTEFYTSITRRSLFRRDKRAPCMATNPIDQCWRCDPNWIRNRKKLADCALGFGKGTI
GGRDGDIYVVSSPSDEPLDPKPGTLRYGVIQNVPLWIIFARSMIITLKEELLITCDKTID
ARGTNVHIAYGAGLTVQFVKNVIVHNLHIHHILHKSGGIIKDGSNHFGLRTRSDGNGISL
FGSTNVWLDHLSMYKCSDGLIDVVQGCTAITISNCHFTDHNDVMLFRASDSYSEDEKMQV
TVAFNHFGKNLVQRMPRARFGFFHIVNNEYTYWNMYAIGGSSHPTIISQGNRFRAPVNKA
AKEVCKREYVGPEVWKHWNWRSEGDLMLNGAIFIQSGDPNASKKYGGDKLMAVMPAHRVP
FMVKWSGTLICVPGRAC
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
aaacttggttcaactgagttctatacaagtatcacgaggcgatctttgtttagaagggat
aaaagggctccttgtatggcaaccaaccccatcgatcaatgctggcgttgtgatccaaac
tggataagaaataggaagaagttggctgattgcgctctcggattcgggaaaggtaccatt
ggtggaagggacggagatatttacgtggtcagtagtccttcggatgagccgcttgaccct
aaacctggtaccctacgttatggtgtgatccaaaacgtgccactttggatcatctttgca
agaagcatgatcatcacgctgaaagaggagctgctcatcacatgcgacaagaccatcgac
gctagaggaaccaacgtgcatatcgcttatggggctggtcttaccgttcagtttgtgaag
aacgtcatcgtccataacctccatatccatcacattcttcacaagagtggtggcataatc
aaggacggttcaaaccactttgggttgaggacaaggagcgatggtaatgggatttccctc
tttggaagcaccaacgtttggcttgaccatctttccatgtacaaatgctccgatggtctc
attgatgttgttcaaggttgtaccgccatcaccatttccaactgtcatttcactgatcac
aacgacgtgatgttgtttagagcaagtgacagctacagtgaggatgagaagatgcaggtc
actgttgctttcaaccatttcggaaaaaacttggtacagaggatgcctagggcccgattt
ggtttcttccatatcgtcaacaacgagtacacttattggaacatgtatgccatcggaggc
agcagccaccctacgattatcagccagggcaaccgatttagagctccggttaacaaagca
gccaaagaggtctgcaagagggaatatgtaggaccggaagtgtggaagcactggaactgg
agatcagaaggtgacttgatgttgaatggtgccattttcattcagtccggagatccgaac
gccagcaagaaatacggaggtgacaaattgatggctgttatgccggctcatagggtgcct
tttatggtcaagtggtctggaacacttatctgcgtccctggcagggcttgctaa
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