Hibiscus syriacus (Rose-of-Sharon): 120156509
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Entry
120156509 CDS
T09559
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120156509
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120156509
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120156509
NCBI-ProteinID:
XP_039023750
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All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MAVCSNNNFSVLGFVLSFVSIIPSPLAHIAKYDDYWRERELQAIENLDKAYNPRPEEVTN
HYNEHAARTLIGFNSTRRDLREKLKRGPCMATNPIDQCWRCNQMWAENRKRLVDCALGFG
RGTTGGKDGEFYVVTDPSDDDLINPKPGTLRHAVIQERPLWITFAHPIMIKLKEELIIST
GDKTIDGRGARVHIAYGAGITIQYTTNIIIHNLHIHDIIPGKGGIIRDSESHFGLRTESD
GDGISLFGASNVWLDHLSMYRCSDGIIDAIQGSTAITISNCNFTDHSDVMLFGGSDTSVL
DHKMQITVALNIFGKGLVEKMPRCRFGFTHVVNNDYTHWLMYAIGGSSHPTIISQGNRYK
ATFNRLTKEVTARISAPPAVWKSWDWISEGDEFLNAAFFTPSGNPDAGKKFGADKMMPFQ
PGHQVPLLTVYSGALGCKAGKPC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttgtagcaataataattttagcgtacttgggtttgttttgtcctttgtctca
ataattccaagcccgctagctcacatagcaaaatatgatgattactggagggaacgagag
ttgcaggccatagaaaatcttgacaaggcctataacccccgcccagaggaggtcaccaac
cattacaacgagcatgctgctaggactttgatagggtttaatagcacaagacgggatttg
agggaaaagctgaagagggggccctgtatggcaaccaaccccatcgatcaatgctggcga
tgtaatcaaatgtgggcagaaaataggaagaggttggttgattgcgcccttggatttggc
cgtggtactacaggcggaaaggatggagagttctacgtggtcacagatccttcagatgat
gatcttattaatcctaaacctggaactctacgccatgctgtgatccaagagaggcctctt
tggatcaccttcgcacaccccattatgatcaagctcaaagaagagctcattatttcaact
ggtgacaaaaccatcgatggtaggggagccagggtgcatattgcttatggggctggtatt
actatccagtatacaacgaacatcatcatccataaccttcatatccacgatattatacca
ggcaaaggcggcataatcagggattcggaaagccactttggattgagaacagagagcgat
ggtgatgggatctctcttttcggagcaagcaacgtttggctagaccatctttcaatgtat
cgatgttccgatggtatcattgatgctattcagggttccactgccattactatttccaac
tgcaattttaccgaccacagtgatgtgatgttgtttggaggaagtgacacatctgtccta
gatcataagatgcagatcactgttgctttgaacattttcggtaaaggattggtagagaag
atgcctaggtgccgatttggttttactcatgtggtcaataatgactatacccattggctc
atgtatgccataggcggcagcagtcaccctacaattatcagccagggcaaccgatataaa
gcaacatttaacaggttaacaaaggaggtgaccgcgaggatttctgccccaccggcagtg
tggaagagttgggattggatatcagagggtgatgaatttttgaatgctgcctttttcact
ccatctggaaacccagatgccggcaagaaattcggagccgataaaatgatgccttttcag
cctggtcatcaggtgcccttactcactgtttattctggagcacttggatgcaaagcgggg
aagccgtgctaa
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