Hibiscus syriacus (Rose-of-Sharon): 120157811
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Entry
120157811 CDS
T09559
Name
(RefSeq) probable pectate lyase 13
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120157811
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120157811
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF5997
Motif
Other DBs
NCBI-GeneID:
120157811
NCBI-ProteinID:
XP_039024759
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MLRFTCIILICMLGSFFSFARAAFNLSLPHQHPFPESVVHDVQRRLNVSVSRRQALSVSQ
KDQCLTGNPIDDCWRCDPEWYNNRQRLADCSIGFGQGTLGGKGGRIYTVVDSSDNDVANP
KPGTFRHAVIQDEPLWIIFSTNMVIKLKHELIFNSYKTVDGRGTTVHVTGNGCITLQYVQ
HVIIHNIHVHHCKPSGNADIASTPTHVGWRGRSDGDGISIFGSQKIWIDHCALSYCTDGL
IDAIMGSTGITISNSYFSHHNEVMLLGHDDRHLADSGMQVTIAFNHFGEALVQRMPRCRR
GYIHVVNNDFTAWEMYAIGGSANPTINSQGNRYTAPVDPNAKEVTKRVDTDEREWAGWNW
RTDGDLMVNGAYFVPSGAGVSAQYAKASSVEPRSAAYIDQLTFNAGVFGEARAETGSFVY
PGSVGNSGSTGTGTTSGGEGSSDDGNYFGMIFGNGAPPESTPPPLTSTFLFLLIILILYS
ITNQGALPPLLL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtttcacatgcattatcttaatatgtatgttgggttccttcttttcatttgct
agagctgccttcaatcttagcctccctcaccaacatcctttcccagaatctgttgttcat
gatgttcaaaggagattaaatgtgtccgtatcgagaagacaagccctctccgtgagccaa
aaagatcaatgtctaacgggaaaccccatcgacgattgctggaggtgcgatcccgaatgg
tacaacaaccgccaacgcttagccgactgctccatcggcttcggacaaggaaccctcggc
ggaaaaggcgggcggatttacacagtcgtggattcgtccgacaacgacgttgccaacccc
aaaccgggcactttccggcacgccgtcatccaagacgaacccctctggatcatcttctcg
accaacatggtgatcaaactcaaacacgaactcattttcaactcgtacaagacggtggac
ggccgcggcacgaccgttcacgtaaccggcaacgggtgcataacgttgcagtacgttcag
catgtgatcatacacaacatccacgtccaccattgtaaaccctcggggaacgccgacatc
gcgtcgacgccgacgcacgtcggctggagggggagatcggacggtgatgggatctctatt
ttcggttcgcaaaaaatctggatcgatcattgcgcccttagttactgcaccgatggcctt
atcgatgcaatcatgggatccactggaatcacaatcagtaacagctatttttctcaccac
aacgaagtcatgcttttagggcatgatgacaggcatttggcggattcgggaatgcaggtg
acgatagcgtttaatcatttcggagaagcgttggtgcaaagaatgccgaggtgcaggcga
gggtatatccatgtggtaaacaatgattttactgcttgggaaatgtatgccatcggcggt
agtgctaaccctaccattaatagtcaagggaatcgatatactgcacctgtcgaccctaat
gctaaagaggtgacaaagagagtggacacagatgagagagaatgggcagggtggaactgg
aggacggatggggacttaatggtaaatggagcgtatttcgtgccgtcgggagccggcgta
agtgctcagtatgctaaagcttcaagcgtcgagcctagatccgctgcctacattgatcag
ctcactttcaatgccggcgtctttggcgaggccagggcagagactgggagctttgtttat
cccggatccgtcggcaacagcgggtccaccggcaccggcaccactagcggcggtgaaggg
tccagtgacgatggcaactactttggaatgatattcgggaacggcgcgccaccagaatcg
accccaccacctttgacatcaacatttttgtttcttctaattattttaattttgtattct
attaccaaccaaggtgctctaccgccattattattgtaa
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