Hibiscus syriacus (Rose-of-Sharon): 120165920
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Entry
120165920 CDS
T09559
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120165920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsyr03000
]
120165920
Transcription factors [BR:
hsyr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
120165920
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
FkbH_N
Pik1
Motif
Other DBs
NCBI-GeneID:
120165920
NCBI-ProteinID:
XP_039031281
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MDDSLYELFEEAEFGPGGDDDLFSFFESFDGNPEFPPFPPLGETAVARCPKDGEETTMSV
TPKDSSEPEHEPKSKKPKLASSEETDADGQQRMSHITVERNRRKQMNEHLSVLRSLMPCF
YVKRGDQASIIGGVVDYINELQQVLQSLQAKKKRKVINEVLSPRVVSSPRPSPLSPRKPP
LSPRINLPISPRTPQPGSPYKPRLHQGYRSPAMTTTLEPSPSSSTSSVENVNELVAKSKS
PIANVEVKFSGPNLILKTVSPPIPGQAVKIISALEDLSMEILNVNINTIDDTVLNSFTIK
IGIECQLSAEELAHQIQQTFS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagtttatacgagttgttcgaagaagctgaatttggacccggcggagatgat
gacctcttttcttttttcgagagttttgatggtaacccggaatttccacccttccctcca
ttgggagaaacggccgtcgctcgctgcccgaaagacggtgaagaaactacgatgtcggtg
accccaaaggactcgtcggagcctgagcatgaacccaaaagcaagaagccgaagcttgct
tcttctgaggaaacagacgcagatgggcaacaaagaatgtctcatatcacggttgaacgc
aacaggaggaagcaaatgaacgagcatttatcggttctcagatcgttgatgccttgcttc
tatgtgaaaagaggcgatcaagcatcgattatcgggggtgttgtggattacatcaacgag
ttgcagcaagttcttcaatccctccaggccaagaagaaaaggaaagttatcaacgaagtg
ttaagccctagggtagtttcaagtccaagaccctcccctcttagccctcggaaaccacca
ttaagtccaaggattaacttgccgattagcccaagaacccctcaaccaggtagcccttac
aagccacggttgcaccaaggttaccgctctccagccatgaccactactctcgaaccctcc
ccttcttcttcaacttcctccgtagagaatgttaacgagctcgttgcaaaatcaaagtcc
cccattgcgaatgtggaagtgaagttttcaggcccaaatcttattctaaagacggtatct
cctccgattcctggtcaggctgtgaagataatatccgctcttgaagacctctcaatggaa
atcctcaatgtcaacattaataccattgatgataccgtgcttaattccttcaccatcaag
attggaattgaatgccaactgagtgcagaagaactcgcacaccaaatccagcaaacattc
agctaa
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