Hibiscus syriacus (Rose-of-Sharon): 120177365
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Entry
120177365 CDS
T09559
Name
(RefSeq) probable pectate lyase 20
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120177365
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120177365
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120177365
NCBI-ProteinID:
XP_039039475
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MGISHRFISSFTLLLIMLSVCVSASEEKTELNSRLVEDNKLQGLKNSSMADGLDDEKWRN
EHAVDNREEIASMVDMSIRNSTERRNLGYFSCGTGNPIDDCWRCDRLWYRRRRRLANCGI
GFGRNAIGGRDGRYYVVSDPGDDNPVNPKPGTLRHAVIQDRPLWIVFKRDMVITLKQELI
MNSFKTIDARGVNVHITYGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPSHYGWRTM
ADGDGISIFGASHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSY
VRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNR
FLAPNNPFAKEVTKREVAWNGEWKHWNWRSEGDLFLNGAYFTPSGAAAATSYARASSLGA
KSSSLVGMITSKAGALPCRNGRMC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggggatttctcacaggttcatctcttcgtttacattgctactcataatgttgtccgtt
tgtgtcagtgcctcagaagagaaaacagagctgaactccaggcttgttgaagataacaaa
ttgcagggcttgaagaactcatcaatggcagacgggttggatgatgagaaatggagaaac
gagcatgcggtggacaatcgtgaggaaattgcttcaatggttgatatgagcataagaaat
agtacggagcggagaaacttgggatatttctcgtgtggaacagggaatccgatcgatgac
tgttggcggtgcgacaggctatggtaccgtaggcgaagacgcctagcaaactgtggcatc
gggttcggacgcaatgccattggtggtcgtgatggaaggtactatgttgtgagtgacccc
ggtgacgataaccctgtgaaccccaaaccaggcaccctccgccatgccgttatccaagac
cggcctctatggatcgtgttcaagcgtgacatggtgatcacattgaagcaagagctgata
atgaacagttttaagacgatcgacgctcgcggagtcaacgtgcatatcacttacggggca
tgcatcaccatccagttcgtcaccaacattatcatccacggactccacattcatgactgc
aagcccacagggaatgccatggttcgaagctccccgtctcattacggatggaggaccatg
gccgatggggatggcatttcgatttttggagccagtcatatctggatcgaccacaactca
ctgtctaattgtgctgatggacttatcgacgcaataatgggatccacggcgattacaatc
tcaaacaactacttcacccatcacaatgaggttatgctgttgggacatagtgattcttat
gtaagagacaagcagatgcaagtcaccattgcttataatcacttcggtgagggcctgatc
cagcgcatgccgaggtgtcgacatggatatttccatgtagtgaacaatgactatacacac
tgggaaatgtacgccatcggcggaagtgccgatcccaccattaacagccaaggcaaccgt
ttccttgcccctaataaccccttcgccaaggaggttacgaagagagaagtcgcatggaat
ggtgaatggaagcattggaattggaggtcagaaggagatttgttcttaaatggagcgtat
ttcactccgtcaggtgctgcagccgccaccagctatgccagggcctcgagcttaggtgcg
aaatcgtcttccttggtcggcatgattacttcaaaggcaggcgcccttccctgccgcaat
ggccgcatgtgttaa
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