Hibiscus syriacus (Rose-of-Sharon): 120181691
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Entry
120181691 CDS
T09559
Name
(RefSeq) probable pectate lyase 19
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120181691
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120181691
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120181691
NCBI-ProteinID:
XP_039042705
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All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MTTSTSRLVFLFSFAALIPTLWGSFIAEYDEFWKQREREAWKNTLAAYDPNPENVTRKLN
QHVNLNRIWDLGGDGDGGNATTTTRRSLRGKHKKYTGPCMVTNPIDKCWRCRANWADNRK
KLADCVVGFGHKTEGGKDGDFYVVTDNSDDDMLNPKHGTLRWAVIQKEPLWIIFAHDMHI
KLSHELIIQSKKTIDGRGANVHIGYGAGMTLQFVQDVIISNIHVHHILPSQSTVIRDSVD
HYGLRTMGDGDGINIFGSTNIWLDHLSMSECQDGLIDAVQGSTAITISNCHFTHHNDVIL
LGASDSYERDKLMQVTVTFNHFGKELIQRMPRCRWGFFHVVNNDYTHWKMYAIGGSKHPT
IISQGNRFVAPDDSKAKEVTNRNYASEEEWSKWIWRSEGDLLLNGARFRTSGQLKSPHYD
FTKMEMISAKPATFVGRLTRFAGALDCRKGHEC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgagtacgagccggctggtgttccttttctcatttgccgctcttatcccaacc
ctatggggaagttttatcgctgaatacgatgaattctggaagcaacgcgagcgagaggca
tggaagaacaccctcgctgcttatgatcccaacccagaaaacgtcaccaggaaactcaat
caacatgttaacctaaaccgaatatgggatttgggcggcgacggcgacggtggtaacgcc
accacgactaccaggaggagcttgaggggcaaacacaagaagtacacggggccatgcatg
gtgaccaaccccattgacaaatgctggcggtgtagggctaactgggccgacaaccgtaag
aagctagcggattgcgtggttggttttggccacaaaaccgaaggaggaaaagacggcgat
ttctacgtggtgaccgataattccgacgatgacatgttgaaccctaagcatggaacttta
cgttgggcagtaatccagaaagagccgctgtggatcatttttgctcacgacatgcacatc
aagttgtcgcatgagctgatcatccagagcaagaagacgatcgacggtcgcggagccaac
gtccatatcggatatggagccgggatgacacttcagttcgtgcaagatgtcatcatctct
aacatccatgttcatcacattcttcctagccagagtaccgtgataagggactccgtggat
cattacggtttgcggaccatgggcgacggagatggcattaacattttcggatcgacaaac
atttggctcgatcatctttcgatgtcggaatgtcaagatggactcatcgatgcagttcaa
ggctccaccgccatcacgatctcgaactgccatttcacccaccataacgatgtgatttta
ttgggtgcaagtgatagttacgaaagagataaattgatgcaagtcaccgtaacgtttaac
catttcggcaaggaattgattcaaagaatgccgagatgtagatggggtttcttccatgtt
gttaataatgattacacacactggaaaatgtatgccatcggcggtagcaagcatcccacc
attattagtcagggcaatcggttcgttgctccggacgactctaaagcaaaagaggtaacg
aataggaattatgcatcggaagaggaatggagcaaatggatatggcgatcggaaggggat
ttgttgctgaacggagcccgttttcggacgtcggggcagctcaaatcgccgcattacgac
ttcacgaagatggagatgataagtgcgaagccagcaacatttgtgggaaggctgacccgt
tttgccggagctcttgattgcagaaaggggcacgagtgttaa
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